Nucleotide Global Alignment
Description
- Query:
- TRCN0000473439
- Subject:
- NR_046477.2
- Aligned Length:
- 3948
- Identities:
- 1711
- Gaps:
- 2194
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCTCCTTAGCAACTGCGGGACTGCGGCGGCGCCGGCCTCCGGGGAGAAACGCGAATGACAACAGAGCTGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGGCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCAATAAT 148
Query 1 -------------------ATGAACCTCCGGTCCCTGGGGACCCACAGAGGTGTGTCTGCTGTGGCTGGTCCAC 55
||||||||||||.||||||||||||.|||||||||||||||||||||||||||||
Sbjct 149 GAGCCATCCTGACTACAGAATGAACCTCCGGCCCCTGGGGACCCCCAGAGGTGTGTCTGCTGTGGCTGGTCCAC 222
Query 56 ATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTT 296
Query 130 GAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT 370
Query 204 TAATCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACATTTTTATTGATGGGGTTG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TAATCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACATTTTTATTGATGGGGTTG 444
Query 278 TTGCTCGTAATAGAGCCTTAAATGGGGATCTGGTGGTCGTGAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTT 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGCTCGTAATAGAGCCTTAAATGGGGATCTGGTGGTCGTGAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTT 518
Query 352 AAACCAGAGAGCAATGACAAAGAAACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAGCTCTGTGGACACCA 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAGAGAGCAATGACAAAGAAACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAGCTCTGTGGACACCA 592
Query 426 TCTCCCGCAACAGTCCCTGAAAAGCTATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCG 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTCCCGCAACAGTCCCTGAAAAGCTATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCG 666
Query 500 ACTCAGAAGATGGACATGGCATCACACAAAATGTGCTGGTTGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACTCAGAAGATGGACATGGCATCACACAAAATGTGCTGGTTGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCT 740
Query 574 GAGAAAGGAAGAGAGGATGGTGATGCACCGGTTACAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGC 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGAAAGGAAGAGAGGATGGTGATGCACCGGTTACAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGC 814
Query 648 TTTATCGGAGAAATCCCTGCAAAGATCAGCAAAGGTGGTT---TACATCTTGGAGAAAAAACATTCTCGAGCAG 718
||||||||||||||||||||||||||||||||||||..|| ||||..|| |||||.|...|
Sbjct 815 TTTATCGGAGAAATCCCTGCAAAGATCAGCAAAGGTCATTGCCTACAGATT------------TTCTCCACGTG 876
Query 719 --CAACCGGCTT---CCTCA--------------AACTCTTGGCTGATAAGAACAG--CGAACTGT-------- 763
|||..||||| |||.| |.|||.|| |||| .||| .|.|||||
Sbjct 877 TCCAAATGGCTTTCACCTGAGCTACTTGTTGAAGATCTCGTG--TGAT----TCAGTCAGGACTGTATTTGGTC 944
Query 764 ------TTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTA------GAATTTATGTGCCTCTC 825
|.||.||| ||| |||.||..||.| |.|| |||||.|
Sbjct 945 ATTTAATCAGAAAA--------GTT---------AGAGCAGAGAAT-CATAAAAAGTGAATTAA---------- 990
Query 826 AAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGAT---TATGCCAACACACTGTTCATCTGCC-GCATTG 895
||..| .|..|||| ||||.|| .||.|.|| |.|||||.|| ||.||
Sbjct 991 AAAAA-------AAAAACTT------------TAAACATATAAATACGAA-------TCCATCTTCCTGCCTT- 1037
Query 896 TGGACTGGAAGG-----AGGACTGCAATTTTGCCCTG-----GGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGG 959
|||| .|||| |||.| |||.|..|| ||||||||||||||||||||||||||||||||
Sbjct 1038 TGGA---TAAGGGGTCAAGGCC------TTTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGG 1102
Query 960 TGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTC 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 TGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTC 1176
Query 1034 TAGAATGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAGAAAA 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 TAGAATGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAGAAAA 1250
Query 1108 GACTGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGA 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 GACTGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGA 1324
Query 1182 CGGCAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 CGGCAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAG 1398
Query 1256 TGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGCTGTGTGAG 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399 TGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGCTGTGTGAG 1472
Query 1330 GAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAA 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473 GAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAA 1546
Query 1404 GATCCTTGATGAATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCA 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 GATCCTTGATGAATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCA 1620
Query 1478 TGATTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATAGCAGCGAGGAG 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 TGATTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATAGCAGCGAGGAG 1694
Query 1552 GTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACT 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695 GTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACT 1768
Query 1626 TCGTTTGGATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATG 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1769 TCGTTTGGATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATG 1842
Query 1700 AGTACCGCGAGAGCAACAA---GCCCTGCTGCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGG 1770
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 AGTACCGCGAGAGCAACAACAGGCCCTGCTGCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGG 1916
Query 1771 TGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCC-------- 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 TGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCAA 1990
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1991 ACATTTGGAGATGACAAGTACTCACTGGCCCGCAAGGAGGTGCTCACCAACATGTGCTCCCGGCCCATGCAGAT 2064
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2065 GGCACTGTACTTCTGCTCGGGGCTGCTGCAGGACCCAGCGCAGTTCCGGCACTACGCGCTCAATGTGCCCCTGT 2138
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2139 ACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGC 2212
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2213 TATAGGGAGCGACTAGACATGGCGCCCGATACCCTGCAGAAACAGGCGGACCACTGTAACGACCGCCGCATGGC 2286
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2287 GTCCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCCTGGAGT 2360
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2361 CAGAAGCCATGGTGATGGGCATCCTGAAGCAAGCCTTCGACGTGCTGGTGCTGCGCTACGGCGTGCAGAAGCGC 2434
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2435 ATCTACTGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGT 2508
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2509 CTGGGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCAGGTCAGAACCCCTCTGTGTCCCAGCCCCCTAAGTC 2582
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2583 CTGATGACCCCTCTCCTGCCTCCTGCGGTGCCCCTCATTCCTTCATCTGTGTCCCCTGGGCTCCCCCAGCACTG 2656
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2657 CAGCCTCCCGGGTGGGGTTTTAGGGCCCTCCCAGCTCACCCAGACCCCCTCCTGTGGGTCCTGCTTTCTGGCAC 2730
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2731 CACCTTCCCTTCCTTGGGGGCAACCACAGTGGAGAGAGGAGGGGCTCTGCCTGTCCCGCTAATGCAGGGGTGCT 2804
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2805 GGCCTTCTAGGGTCCTTTAGAGAACCTGATGAAAGCTATGAGTTTACACCCAAGAAATTGTCTGGAACCGTTTT 2878
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2879 CACCAACAGTGTGCCCTGAACGCGGACCCAGGCCCTCAGGTTGTGTTTCATAAGCCTTGGGAGCGCTCAGGATG 2952
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2953 CATCTGACTCCCCAACTCTGCCCTGACCCAGGGCATTCTTCCTGGAGGGGGCCCCCATTACAGACAGGCGAGCA 3026
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3027 GAGGCTTCCAGAGGCCGAAGGAGGGGCCAGGGGTCCTGCTGCAGGGATGGAGGCAGAGCTGCGCCTCGACATCA 3100
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3101 GGCCCTGCCATCCTTGTCCCCTCACGGCTGGGCTCTGCACAGGTCATCACCATCTTCAGCCTGGTGGAGGTGGT 3174
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3175 CCTGCAGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCTGAAGCGGCCAGGCACCCAGGGCCACCTGGGCC 3248
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3249 CTGAGAAGGAGGAGGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGCCGCCTGC 3322
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3323 CCCGCCTGCCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGACCTGTTGACACGGAGGGGGGTTTTTAATTTG 3396
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3397 GTTTTTAACAACTCAGGGGTTTGTTTTTATTTTTATTTAATTTTTGCAGCTCAACTTTTAAACAAACTGCAGGG 3470
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3471 GAGAGGGTGGGGCTGGAAGGAAGGCTGAGGCCTGGTCAGCAGTGACCCCAGCAGAGCAGGCCCCAGTCCTCCTG 3544
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3545 GGAGGCTGGCCCCCCTTTTTTCTGGGCCCTACTGCCCTCCTCTGCCCAGGAAATGGGGGGGTTTCAGCAACTCA 3618
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3619 GTGTCACAGAATAAAATCAAGTGTGGAGTGCCATCTGGTGTGTAGGGCGCCTCTGGGAAGCCTGGGCAGCAGAA 3692
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3693 TGCCCCTTGCACCCAGGGCAAGGGACCCAGTTCAGGCTTCACCCCTCGCTGCTGAGCCGATGTCAACACCTGGA 3766
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 3767 ACTTTCCTGTCAGTTCCAACACGATTCAGAGCTGGCTGCCTGGCAGATGATTGATACTGGAGTCTCATTCTGCC 3840
Query 1837 -------------------------- 1836
Sbjct 3841 TGATTAAAAATGGAATTAGTATGCAA 3866
