Nucleotide Global Alignment
Description
- Query:
- TRCN0000473445
- Subject:
- XM_006498127.1
- Aligned Length:
- 1741
- Identities:
- 685
- Gaps:
- 977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCTGGTGCAGGGGCAGAGCGCTCCGGTGGGCATGAAGGCTGAGGGCTTTGTGGATGCCCTGCACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCCGGCAGATTGCTGCTAAAATCGATTCAATTCCTCACTTGAATAATTCCACACCTCTGGTGGACCCCTCAG 148
Query 1 ---------------------------------ATGCCTCCTAT--AGGTAACCAGTTAGGGGCCTTGGTACAT 39
||| || ||||||||||||||||||||||||||||
Sbjct 149 TGTACGGATACGGAGTACAGAAGCGGGCCCTGGATG------ATGGAGGTAACCAGTTAGGGGCCTTGGTACAT 216
Query 40 CAAAGGACGGTAATAACGGAAGAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGGTGA 113
||||||.|.||||||||.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 217 CAAAGGGCAGTAATAACAGAAGAATTCAAAGTGCCTGATAAAATGGTTGGATTTATTATTGGCAGGGGAGGTGA 290
Query 114 GCAGATTTCACGGATTCAAGCAGAATCTGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGA 187
||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||
Sbjct 291 GCAGATTTCACGAATTCAAGCAGAATCTGGGTGCAAAATTCAGATTGCCTCAGAGAGTTCTGGGATTCCAGAGA 364
Query 188 GGCCCTGTGTACTTACCGGAACCCCAGAAAGTATTGAACAAGCCAAACGGCTCCTGGGACAGATTGTGGACCGC 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||.
Sbjct 365 GGCCCTGTGTACTTACCGGAACCCCAGAAAGTATTGAACAAGCCAAACGGCTCCTGGGGCAGATCGTGGATCGA 438
Query 262 TGTCGAAATGGACCTGGCTTTCATAATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGCATC 335
|||||.|||||.|||||||||||.||.||.||.||..|||||||||||||||||||..||||.||.||.|||||
Sbjct 439 TGTCGGAATGGGCCTGGCTTTCACAACGATATGGATGGCAACAGCACAATCCAGGAACTTCTTATCCCTGCATC 512
Query 336 TAAAGTGGGTCTGGTCATCGGCAGAGGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGATGG 409
|||||||||.|||||||||||||.||||||||||||.||||||||||||||||||||.||.||.|||||.||||
Sbjct 513 TAAAGTGGGGCTGGTCATCGGCAAAGGAGGGGAAACGATCAAGCAGTTGCAGGAGCGAACGGGTGTGAAAATGG 586
Query 410 TCATGATCCAGGATGGCCCATTGCCCACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTA 483
|||||||||||||||||||..||||.||.|||||||||||||||||.||.|||||||||||..|||||||||||
Sbjct 587 TCATGATCCAGGATGGCCCGCTGCCTACAGGAGCAGACAAGCCTCTCCGCATCACTGGAGACCCATTTAAAGTA 660
Query 484 CAGCAAGCAAGAGAAATGGTACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGA 557
||||||||||||||||||||.|||||||||||||||||.|||||.||.||||||||.||||||||.|||.||||
Sbjct 661 CAGCAAGCAAGAGAAATGGTTCTAGAGATTATCCGAGAGAAAGATCAGGCTGACTTCCGGGGTGTGCGCAGCGA 734
Query 558 TTTCAACTCTCGAATGGGAGGAGGCAGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAA 631
|||||.|||.|||...||.|||||.|||||||||||.||||||||||||||||.|||.||||||||.|||||||
Sbjct 735 TTTCACCTCCCGAGCAGGCGGAGGTAGTATAGAGGTGTCTGTGCCTAGGTTTGTTGTTGGGATTGTCATAGGAA 808
Query 632 GAAACGGGGAAATGATCAAAAAGATCCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATT 705
|.|||||.||||||||.||.|||||||||||.||.||||||||||||||.||.||.|||||||||||.||||||
Sbjct 809 GGAACGGAGAAATGATTAAGAAGATCCAGAACGACGCTGGTGTGAGGATCCAATTCAAACCAGATGACGGGATT 882
Query 706 AGTCCAGAATATTACAGA-CA--GCAGGTC----GCTTTCTACGGACAGA----CGTTAG--GGCAG------- 759
||||||||| ||| || ||||||| ||..|| |||| .||.|| .||||
Sbjct 883 AGTCCAGAA------AGAGCAGCGCAGGTCATGGGCCCTC------CAGATCGGTGTCAGCATGCAGCTCGCAT 944
Query 760 ---------GCGCAGGCCCACAGC-CAGGAGCAG---------------------------------------- 783
||.||..|.|||.|| ||||| .||
Sbjct 945 CATCAATGAGCTCATTCTCACGGCACAGGA-AAGAGAGATCCTTGGTGGCCTCACAGTAACAAGAGGAAGAGGC 1017
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1018 CGAGGCCGTAGTGACTGGAGTGTGGGCACTCCTGGGGGCGTCCAGGAAATTACGTACACAGTGCCAGCTGATAA 1091
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1092 GTGCGGCCTTGTGATAGGCAAAGGGGGCGAGAACATCAAAAGCATCAACCAGCAATCAGGTGCCCATGTGGAGC 1165
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1166 TTCAGCGGAACCCCCCTCCTAACACCGACCCTAACCTGCGGATATTTACCATCAGGGGTGCTCCTCAGCAGATG 1239
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1240 GAGGTGGCCAGGCATCTCATAGATGAGAAAGTTGGCGGTGCCAGCCTCGGAGCCCCTGCAGCCTTCGGACAGAG 1313
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1314 CCCCTTCAGCCAGCCACCAGCCGCACCACATCAAAACACCTTTCCTCCCAGGGGCTTCCCCAACATCGCAGCTA 1387
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1388 AAGTTAATGGGAATCCCCACAGCACCCCTGTGAGTGGCCCTCCAGCTTTTCTGACCCAAGGCTGGGGCAGCACT 1461
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1462 TACCAGGCTTGGCAGCAGCCTACACAACAAGTCCCAAGCCAGCAGAGTCAGCCACAGAACAGCCAGCCCGACTA 1535
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1536 CAGCAAGGCCTGGGAGGACTATTACAAAAAGCAGAGTCATCCCACCAGTGCTGCCCCACAGGCCAGCTCCCCCC 1609
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1610 CAGACTACACGATGGCCTGGGCTGAGTACTACAGGCAGCAGGCCGCCTTCTATGGGCAGACTTTAGGGCAGGCT 1683
Query 784 --------------------------------------- 783
Sbjct 1684 CAGGCCCACAGCCAGGTCTGTAGCCAGTCCCCAGCGCCA 1722
