Nucleotide Global Alignment

Description

Query:
TRCN0000473445
Subject:
XR_001746413.1
Aligned Length:
4019
Identities:
699
Gaps:
3313

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTGATTCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGACCCCTCAGTATATGGATACGGAGTACAAAAA  74

Query    1  ----------ATGCCTCCTA-----TAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACGGTAATAACGGA  59
                      |||      |     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGCCCTTGGATG------ATGGAGTAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACGGTAATAACGGA  142

Query   60  AGAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAG  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  143  AGAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAG  216

Query  134  CAGAATCTGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGA  207
            |||||||||||||||||||||||||||||||||                                         
Sbjct  217  CAGAATCTGGTTGCAAAATTCAGATTGCTTCAG-----------------------------------------  249

Query  208  ACCCCAGAAAGTATTGAACAAGCCAAACGGCTCCTGGGACAGATTGTGGACCGCTGTCGAAATGGACCTGGCTT  281
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  250  -----------------ACAAGCCAAACGGCTCCTGGGACAGATTGTGGACCGCTGTCGAAATGGACCTGGCTT  306

Query  282  TCATAATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGGTCATCG  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  307  TCATAATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGGTCATCG  380

Query  356  GCAGAGGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGATGGTCATGATCCAGGATGGCCCA  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  381  GCAGAGGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGATGGTCATGATCCAGGATGGCCCA  454

Query  430  TTGCCCACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTACAGCAAGCAAGAGAAATGGT  503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  455  TTGCCCACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTACAGCAAGCAAGAGAAATGGT  528

Query  504  ACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGAATGGGAG  577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  ACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGAATGGGAG  602

Query  578  GAGGCAGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAAGAAACGGGGAAATGATCAAA  651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  603  GAGGCAGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAAGAAACGGGGAAATGATCAAA  676

Query  652  AAGATCCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATTAGTCCAGAATATTACAGA-C  724
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |
Sbjct  677  AAGATCCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATTAGTCCAGAA------AGAGC  744

Query  725  AG--CAGGTC-----------------------------------------------GCT--TTC-TACGG---  743
            .|  ||||||                                               |||  ||| |||.|   
Sbjct  745  TGCCCAGGTCATGGGCCCTCCGGATCGGTGTCAGCATGCAGCGCATATCATCAGCGAGCTGATTCTTACAGCCC  818

Query  744  -----ACAGACG--TTAGGGCAGGC---GCAGGCCCACAGCCAGGAGCAG------------------------  783
                 |.|||||  ||.||  ||||   ||||     |||||||..|.||                        
Sbjct  819  AGGAAAGAGACGGCTTTGG--AGGCCTGGCAG-----CAGCCAGAGGAAGAGGTCGTGGCCGTGGCGACTGGAG  885

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct  886  CGTGGGAGCCCCTGGTGGCGTCCAGGAGATAACATACACGGTGCCAGCCGATAAGTGTGGCCTCGTCATAGGCA  959

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct  960  AAGGGGGTGAGAACATCAAAAGCATCAACCAGCAGTCAGGGGCGCACGTGGAGCTTCAGAGGAACCCCCCTCCC  1033

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1034  AACAGCGACCCCAACCTGCGGAGATTCACCATCAGGGGGGTTCCCCAGCAGATCGAGGTGGCCAGGCAGCTCAT  1107

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1108  AGATGAGAAAGTTGGCGGGACCAATCTCGGAGCACCTGGAGCCTTCGGACAGAGTCCATTCAGCCAGCCACCTG  1181

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1182  CCCCACCTCATCAAAATACCTTTCCTCCAAGGAGCTCCGGGTGCTTCCCAAACATGGCTGCCAAGGTGAATGGG  1255

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1256  AACCCCCACAGCACCCCTGTGAGTGGTCCTCCGGCCTTTCTGACCCAGGGCTGGGGCAGCACCTACCAGGCGTG  1329

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1330  GCAGCAGCCCACACAGCAGGTCCCAAGGGTTTTGCAGTGGAGAACCGGTTTGGGTTGGTGAAATACTGTTTGGC  1403

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1404  GGCGAAGTCCTGCTTGCCGGCGCCCTCCGCGTCCGAGGGAAGAGTGTTTGCTGCCTGTGTCCCTCTTTCGCCCT  1477

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1478  GCCCCTGTGGGAGGAAGCGGGGCGTCTCCTTCCCTCCTTCCTCCCGCTGCTTGCTTCTTCCCCACGCTGCTCCT  1551

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1552  CAGTATGCAGTAAAGTGAACTAGTGGAGAAAGCATTTGGCTGCATGCTCTCTGCAGTGGTTTGCCCTTCCTCCC  1625

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1626  TGCTTCAGGCTACAATCCTTACAGGAGACGAGACAGTGAGGGGGTCTTTTGTGGGCCTTGGCAGGTGGACACCT  1699

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1700  GAGCCAGCCCCGGCCTGGGCAGAAGGAGAGGTCCTGACCCGCCACTGTGGTCAAGTCTTTGAACCCCCTCTTGT  1773

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1774  GCCTGGCAGGGTGCTGAGGCTCTGTTCCCCCATGCTGGCTGTTTCTCCGCGTCCCCCAGTCTTCACTGCCCACA  1847

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1848  TAGCCTAGAGGGTGAACCCAGGGTCCTGCACAGAAGAGAAGGGCTGGACCACCCAAACACATGCACCCCCTTTC  1921

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1922  CCTCTGCCCTACCCCAGCTGGCCTGAGGCTGGACAGGGTCCAGGAGCCCACTGGTGCTGCCTACCCCTGCTCCA  1995

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 1996  CATGGCCCCTCCACTTCCCTTGGTCCAGAGGCACAGCCCCCAGGCCTTGAACAGAGGGCCACGCGAAGAGAGTG  2069

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2070  GTCAGCAGCCTCTGGAGTCTTTGTCCTTTGGAAGGCTGATTGGGGAGCCTCAGAACAGCAGTGGCTGTGGCCGT  2143

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2144  CAAGCTTGCGTCTCCATCTGAAGAGGGTCAGGCTAGCCTTGCTAGTTGCCTCGTGTGCCCAGCCCCACCCTTAC  2217

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2218  AGTGATCTTAGTTACACCCCTTCCCCCAGCCCTGCCAGCTGCCACCTCCTTCCCAGGCAGGGCTGCGGAGCCGT  2291

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2292  GTGTGGCCAGGAGCGAGGTGGAGGAGTGCAGGGCAGGGCCTGCAGCTGGCGGGCTGGGGCCGAGGCTGTGAGGA  2365

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2366  GCCCGTAAGGCCTGACTGCTTTTGTGTTCTTCGCACAGGCCAGCAGAGCCAGCCGCAGAGCAGCCAGCCCAACT  2439

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2440  ACAGCAAGGCCTGGGAAGACTATTACAAAAAACAGAGTCACGCCGCCAGCGCTGCTCCTCAGGCCAGCTCCCCA  2513

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2514  CCGGACTACACAATGGCCTGGGCAGAATATTACAGACAGCAGGTCGCTTTCTACGGACAGACGTTAGGGCAGGC  2587

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2588  GCAGGCCCACAGCCAGGAGCAGTAGGACAGCGTCCTCGTGGCCAACTCTCCCCTCAAAATCATTGTCAAAGAAA  2661

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2662  ACCTATTTGTAACAGAGGTTTTTACATTTGCAAACCTTTTGATGAAGAACTGTTGTTTTGTTCTGTGAAACACT  2735

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2736  ATATTTAGATTAACGGAATTTTTCTAAAAATCAGGAAAATTAGTTACTAAAAATTGCTGATCATTTTTGTTTCA  2809

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2810  TTATTTTTGTTATTTCAAATGTATAAGCTCTGGGATTCTTTTTGGAGCAATACCTACAAAGTCAGGCACCAGAA  2883

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2884  TGTGCCTCAGAGCTGTGACATTTCAACATGATGGTTTTGGTTTGGTTTGGTTTTGTGTCCTTTTTATTTGCAGT  2957

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 2958  TTTTTCTGTTGCAACAGAAAGTGGCTTGGAAGTCTTAGGTGGTATGTAACAAATTCTTTTTAAAAATTTTAAAG  3031

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3032  CAGTATTTAAGTATTCTTAAATGTGTAAATTCATTTAATGTTTTACTTCTAATTTCTTGTATCTTGGCTGTCTG  3105

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3106  GTTTTATTGCATTTTTAAAAAAACTGAACTATTATGTATTGTAATGAATGATGTGAATTCTGAACTGAGACAGA  3179

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3180  TAATTGTATTGCTGTCCAACAGGGGTTGGGAGGGGCATTTTGTAGGGTTTGTATAATTTCTAGAGTTCGAAAGG  3253

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3254  GGTAATATAAAAATGTGCTCGTGTGTTTAGCCTACGTTTTTCTCATGCCTCCATTACCAGTTGCAATTGTGTAT  3327

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3328  CTAAGACCTCCAAGCTTGTTTTTAAAACAAAACAAAAAACCTTTCTCTATTATCTCAGAAATATAAATACTGTT  3401

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3402  ATTTTTAATATTAAGAAATTCAATATAACTTTTAACACACACTGTGGAACATTAAACCGTATAAAAATGTAGTT  3475

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3476  ATAACTATTTTTAATTCCAAGGTGTTGTTTGCTTTTTTCTTTTAAATATTTTCTTAATATTTTGTCAGATTAAC  3549

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3550  TAGATGAATAAATAAATCTAGTATTAACCGCATTATGAATTAAATAATTTTGATTTAATGAAAGGGATAATATG  3623

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3624  ATTTCCAGTGTTTACTGTAGTGTATCTTGTACAGATAACATGTATTTTTAAAGGAAAAAAAACGGAATTGAAGC  3697

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3698  TATTTTTTCTTGCATTTCTAATTGACCTGAGGGACATTCCGTTTGAAATGTACTGAAGTTACAGTTTCTGGTTT  3771

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3772  TTTCTCCTTATTTTTCTTATAATGCTTGAAATGTCTAACTATTAAAAAAGACAATTGGAAAATGTTATGCATGG  3845

Query  784  --------------------------------------------------------------------------  783
                                                                                      
Sbjct 3846  GGTTTTTAAGAAAACAAAGTGTTCTTTTTATTTGACTGACAATTCATTTTACACTCTATATAATAAAATCTCCA  3919

Query  784  -----------------------  783
                                   
Sbjct 3920  CAAGGCATCTTGTGGGCAAAGTC  3942

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