Nucleotide Global Alignment
Description
- Query:
- TRCN0000473503
- Subject:
- NR_149158.2
- Aligned Length:
- 4103
- Identities:
- 543
- Gaps:
- 3514
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATCAGAACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGTAAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCAGCATTTTTACTTATTTGGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGA 444
Query 1 --------------ATGG-----AACAG-------GAGGATAATATAATCATT------CAAGAAACCAATGAT 42
|.|| |.||| |||.|.|||.||..|||| .||||||...||.||
Sbjct 445 TAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCAT 518
Query 43 AGGCTGGTC----TTCAAAG-------CAATTCAAGATGTGCTAAAAGAAAAACTACAT--AAAAGAGGTG--- 100
|..|| || ||||||| |..||| |||.|...||||| ||.||||||| ||.|.|||||
Sbjct 519 ATCCT--TCCAGATTCAAAGATGACACCTCTTC--GATTTAGAAAAAG-AACACTACATGAAACAAAGGTGCAA 587
Query 101 --TT--CGTATTTTGA---CTGGAT----------------------------------------------TGG 121
|| |.| |||||| || ||| |..
Sbjct 588 CCTTGACAT-TTTTGAGTTCT-GATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCC 659
Query 122 GA-----AAATATT--TTCAACAG--TTGGA------CAAGGAAGGAAATGGACTTTTA--GATAAGGCAGAT- 177
|| ||||||| |..||.|| ||||| ||| ||.|| |||.|| ||..|||..|||
Sbjct 660 GAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAA------AACTG--CTTCTATGGAACAGGAGGATG 725
Query 178 ---------TTTAAGCAAGCTCTAAAAG--TGTTTCACTTAGAAGTGTCTGAA---AAGGATTTTGAGTCTGCA 237
||.|||.||.|..|.|.|| ||.| |||..||| .|| ||||||||||||||||||
Sbjct 726 ATATAATCATTCAAGAAACCAATGATAGGCTGGT---CTTCAAAG-----CAATTCAAGGATTTTGAGTCTGCA 791
Query 238 TGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAAT 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 TGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAAT 865
Query 312 GAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTA 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 GAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTA 939
Query 386 TTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAA 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 TTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAA 1013
Query 460 ATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGA 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 ATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGA 1087
Query 534 AGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGG 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 AGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGG 1161
Query 608 GGATT--------------------------------------------------------------------- 612
|||||
Sbjct 1162 GGATTTAGTCTTTAATAATACATATGTCATCAACACTAAGCATTTTATTGGAGAGATGATATCAATGTAAAGGA 1235
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1236 TGATCAAACACTGGAATATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTTGTTTGTTTTGTTTTGTTT 1309
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1310 TGTTTTCTCAAAAATGTTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGT 1383
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1384 GCATGTGTATGCCTGTTCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTATTACTTATCTTGCGTATA 1457
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1458 TTTTAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAATATGGCAACATCTATTTA 1531
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1532 TTAACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATATATTTGCCACCATGGTCAA 1605
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1606 TTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAACACATGAAAATATTAAAGG 1679
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1680 ATATGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAATATTTCAAATGATGGAGG 1753
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1754 TTTACCCCATGATGCTCATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAATTATGTACTGTTGTTGGT 1827
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1828 TAAATAGAGCACAATGTAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCTGCTTTTTAACTGTAATCC 1901
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1902 TTTTTACCAGCATACGATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTAAAATCAATACATTATCTT 1975
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1976 ATTAAACAAAGATCCTAAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTCAGTAATTATTGCCTAAAA 2049
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2050 TGTGAAAGCATATTTTGTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTTTAGTATAACAAACAATTG 2123
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2124 AAACATTTCCTTCTAAATATATGTTATTTAATAGTTACATGTATTATAATCATTCTTTCTAAATTCTTTGCTAG 2197
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2198 TCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACTTCATAATTTTAAATTTTC 2271
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2272 TATGTTAATATAACATAAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTACTTTGTAGAATATGACTTT 2345
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2346 AGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAACAAATTCAA 2419
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2420 AGTTGCACTTTTCAAGATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAGGGAAAATATGTGTAAACC 2493
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2494 TCTAGTGCTATTTTCACTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAGGTTATTAAAATTAAAACA 2567
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2568 ATATGCTAGAAGACATTTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATATCTTTTTCTTGGAAAAAT 2641
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2642 TTATCCAACTATAGACATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAATACTGGGGGTGCTCAATA 2715
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2716 TGCATATAGTGTTTTTCATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTTAATGTTGGCATGTCACAT 2789
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2790 TTTTCTGTTACTATAATCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAAAAAGGGAAGCTACTTTTG 2863
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2864 GAATGTAACGTGTTAACATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAACATAAGCATTCACATGTG 2937
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2938 GTTATTTGTAGGAAATAGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGAATTGGTGACACAGTAAAT 3011
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3012 CATTCTGCTTTTGGATTTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGTAAAATCTGTTATTTAGTG 3085
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3086 TTAAACTTAATAAAAGAGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACAACTGACTTTTGAAATCCT 3159
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3160 ATGCTTAATAGTCTTTGTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAATTATATGTTGTAATGCTG 3233
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3234 TTACATGAATTTTATAGTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTACTTGCTTGTATGCTATAT 3307
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3308 AATTGCTTTCTCAGTTAACCATACTGTTTATGGAATTGTATATACTGATTTTTCTGTTTTTATATTTTAAAAAT 3381
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3382 AAAAGTTGAGAATTTTAAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATATAGGAATTTTAAGCTAACT 3455
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3456 TTTAATGGAAAGGACATACATATTTGCATGATGGAGCAATCACATTATAGTTAAACATGTATGTCCCTGTTTTA 3529
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3530 AATTTTATAGTATATAAATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCAGTCACTTAGAGTAATTAA 3603
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3604 TAATCTTGATACAGCTGTAGATCATATCTTATTTTACATATTACTTTTGACTTCCAGTTTAAGTTGTTTGTTAT 3677
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3678 CAAGTATTTCAGGAGAGAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTAACATGCTTTTATGAGATT 3751
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3752 ATAGTTTGTAGTGCTTGCAAATATAAAACATGTACCCTGATAAACTATAATCACTACTAGGTTGACCAGCAAGG 3825
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3826 ACAAACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGCATATATAAAAT 3899
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3900 AAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAGAG 3973
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3974 GCTCTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTGATTTCTTGGAT 4047
Query 613 --------------------------------- 612
Sbjct 4048 GTACTTAATAAAGAATAAATGTTTCATATTGGA 4080
