Nucleotide Global Alignment
Description
- Query:
- TRCN0000473520
- Subject:
- XM_005250445.4
- Aligned Length:
- 2893
- Identities:
- 980
- Gaps:
- 1886
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAGAATGGGAAAGGGGTGCCCTGCTTCTGGGCCCCGCTCCTGGTTGCTCTCGGATGAGCTGGTCCAAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTCGGGCTGGTGTCTCTGCGTCCTTCCCAGTTGGGTTCCGAGAGGGAGGGGGCGGTGGGGATTTTCGTAGGG 148
Query 1 ------------------ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTT---GC---TGCTCTGTGTCCT 50
|||.||| |||| .|.|||.|.|.|.||.|| || |.||| |||
Sbjct 149 GAGACGTAGGACTGCAGGATGGAGG----AGTG--AGGGTCAGGGTCATTATTTTCGCCTTTTCTC----TCC- 211
Query 51 GGGGA---CCTGCCCTCCGGCGCGCTGCGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGG 121
| |||.|..|||.| |.|.|.|||.|| ||||||||||||||||||||||||||||||||||||||
Sbjct 212 ----ACTCCCTCCTTTCCCG---GTTCCTGCCTGG-AGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGG 277
Query 122 AAAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGT 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 AAAACCGCTTCGTGGAGCGCCAGAGCATCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGT 351
Query 196 CGGCACGACGCGCTCGACACGCGGGTGCGGGGCGACGTCGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAG 269
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 352 CGGCACGACGCGCTCGACACGCGGGTGCGGGGCGACCTCGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAG 425
Query 270 CTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAAT 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 CTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAAT 499
Query 344 ACATAGAGAGACACATTGAACATGGAGGCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGC 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 500 ACATAGAGAGACACATTGAACATGGAGGCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGC 573
Query 418 CATATCCGAGGAAACCCTGACTCATTTGTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGG 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 CATATCCGAGGAAACCCTGACTCATTTGTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGG 647
Query 492 GAACCACACATATCTCATTGAGCCAGAAGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 GAACCACACATATCTCATTGAGCCAGAAGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACA 721
Query 566 AATCCAGACTGTTTGAATTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAA 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 722 AATCCAGACTGTTTGAATTTTCCTTGGATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAA 795
Query 640 TTTATTTTGAAGCCAAGACCAAAAAGGAGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAAC 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 TTTATTTTGAAGCCAAGACCAAAAAGGAGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAAC 869
Query 714 CAAATACATTGAACTGATGATTGTGAATGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCA 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 CAAATACATTGAACTGATGATTGTGAATGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCA 943
Query 788 ATACCTATGCGAAATCTGTGGTGAACATGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTG 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 ATACCTATGCGAAATCTGTGGTGAACATGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTG 1017
Query 862 GTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTT 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTT 1091
Query 936 TATGAAATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGCAGTTCACCTTTTTTC-GTACGTAACTT----- 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.|.||.|.||
Sbjct 1092 TATGAAATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGCAGTTCACCTTTTTTCGGGAAGTCAATTTGAGA 1165
Query 1004 --------------------------------------------CTGTAATG-----------ATGTATT---- 1018
|||.||.| |||.|||
Sbjct 1166 GTAGCCGGAGCGGGGCAGCTTATATTGGTGGGATTTGCTCGTTGCTGAAAGGAGGAGGCGTGAATGAATTTGGG 1239
Query 1019 ---ACTTTTTT--------------------------------------------------------------- 1026
|||..|||
Sbjct 1240 AAAACTGATTTAATGGCTGTTACACTTGCCCAGTCATTAGCCCATAATATTGGTATTATCTCAGACAAAAGAAA 1313
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1314 GTTAGCAAGTGGTGAATGTAAATGCGAGGACACGTGGTCCGGGTGCATAATGGGAGACACTGGCTATTATCTTC 1387
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1388 CTAAAAAGTTCACCCAGTGTAATATTGAAGAGTATCATGACTTCCTGAATAGTGGAGGTGGTGCCTGCCTTTTC 1461
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1462 AACAAACCTTCTAAGCTTCTTGATCCTCCTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGGAGTGTGATTG 1535
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1536 TGGAACCCCGGCCGAATGTGTCCTTGAAGGAGCAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACTCTCAAT 1609
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1610 GCAGTGACGGTCTTTGCTGTAAAAAGTGCAAGTTTCAGCCTATGGGCACTGTGTGCCGAGAAGCAGTAAATGAT 1683
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1684 TGTGATATTCGTGAAACGTGCTCAGGAAATTCAAGCCAGTGTGCCCCTAATATTCATAAAATGGATGGATATTC 1757
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1758 ATGTGATGGTGTTCAGGGAATTTGCTTTGGAGGAAGATGCAAAACCAGAGATAGACAATGCAAATACATTTGGG 1831
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1832 GGCAAAAGGTGACAGCATCAGACAAATATTGCTATGAGAAACTGAATATTGAAGGGACGGAGAAGGGTAACTGT 1905
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1906 GGGAAAGACAAAGACACATGGATACAGTGCAACAAACGGGATGTGCTTTGTGGTTACCTTTTGTGTACCAATAT 1979
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1980 TGGCAATATCCCAAGGCTTGGAGAACTCGATGGTGAAATCACATCTACTTTAGTTGTGCAGCAAGGAAGAACAT 2053
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2054 TAAACTGCAGTGGTGGGCATGTTAAGCTTGAAGAAGATGTAGATCTTGGCTATGTGGAAGATGGGACACCTTGT 2127
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2128 GGTCCCCAAATGATGTGCTTAGAACACAGGTGTCTTCCTGTGGCTTCTTTCAACTTTAGTACTTGCTTGAGCAG 2201
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2202 TAAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGCAGTAATGAGCTGAAGTGTGTGTGTAACAGACACTGGA 2275
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2276 TAGGTTCTGATTGCAACACTTACTTCCCTCACAATGATGATGCAAAGACTGGTATCACTCTGTCTGGCAATGGT 2349
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2350 GTTGCTGGCACCAATATCATAATAGGCATAATTGCTGGCACCATTTTAGTGCTGGCCCTCATATTAGGAATAAC 2423
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2424 TGCGTGGGGTTATAAAAACTATCGAGAACAGAGACAGTTACCCCAGGGAGATTATGTAAAAAAGCCTGGAGATG 2497
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2498 GTGACTCTTTTTATAGCGACATTCCTCCCGGAGTCAGCACAAACTCAGCATCTAGTTCTAAGAAGAGGTCAAAT 2571
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2572 GGGCTCTCTCATTCTTGGAGTGAAAGGATTCCAGACACAAAACATATTTCAGACATCTGTGAAAATGGGCGACC 2645
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2646 TCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGGCAAAAGATTTAGACCTCGGT 2719
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2720 CTAATTCAACTGAGACTTTATCTCCTGCCAAGTCTCCTTCTTCATCAACTGGGTCTATTGCCTCCAGCAGAAAA 2793
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2794 TACCCTTACCCAATGCCTCCACTTCCTGATGAGGACAAGAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGAC 2867
Query 1027 ------- 1026
Sbjct 2868 ATCCATT 2874
