Nucleotide Global Alignment
Description
- Query:
- TRCN0000473520
- Subject:
- XM_011516323.2
- Aligned Length:
- 2808
- Identities:
- 1016
- Gaps:
- 1782
Alignment
Query 1 ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACCTGCCCTCCGGCGCGCTG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACCTGCCCTCCGGCGCGCTG 74
Query 75 CGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCA 148
Query 149 TCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCGACACGCGGGTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCGACACGCGGGTG 222
Query 223 CGGGGCGACGTCGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTC 296
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGGGCGACCTCGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTC 296
Query 297 ATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAG 370
Query 371 GCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTT 444
Query 445 GTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGA 518
Query 519 AGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGG 592
Query 593 ATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGG 666
Query 667 AGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAA 740
Query 741 TGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACA 814
Query 815 TGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGAC 888
Query 889 AACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAA 962
Query 963 AGAGAAAAGTGATGCAGTTCACCTTTTTTC-GTACGTAACTT-------------------------------- 1003
|||||||||||||||||||||||||||||| |.|.||.|.||
Sbjct 963 AGAGAAAAGTGATGCAGTTCACCTTTTTTCGGGAAGTCAATTTGAGAGTAGCCGGAGCGGGGCAGCTTATATTG 1036
Query 1004 -----------------CTGTAATG-----------ATGTATT-------ACTTTTTT---------------- 1026
|||.||.| |||.||| |||..|||
Sbjct 1037 GTGGGATTTGCTCGTTGCTGAAAGGAGGAGGCGTGAATGAATTTGGGAAAACTGATTTAATGGCTGTTACACTT 1110
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1111 GCCCAGTCATTAGCCCATAATATTGGTATTATCTCAGACAAAAGAAAGTTAGCAAGTGGTGAATGTAAATGCGA 1184
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1185 GGACACGTGGTCCGGGTGCATAATGGGAGACACTGGCTATTATCTTCCTAAAAAGTTCACCCAGTGTAATATTG 1258
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1259 AAGAGTATCATGACTTCCTGAATAGTGGAGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCTTGATCCT 1332
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1333 CCTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGGAGTGTGATTGTGGAACCCCGGCCGAATGTGTCCTTGA 1406
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1407 AGGAGCAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCTGTAAAAAGT 1480
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1481 GCAAGTTTCAGCCTATGGGCACTGTGTGCCGAGAAGCAGTAAATGATTGTGATATTCGTGAAACGTGCTCAGGA 1554
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1555 AATTCAAGCCAGTGTGCCCCTAATATTCATAAAATGGATGGATATTCATGTGATGGTGTTCAGGGAATTTGCTT 1628
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1629 TGGAGGAAGATGCAAAACCAGAGATAGACAATGCAAATACATTTGGGGGCAAAAGGTGACAGCATCAGACAAAT 1702
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1703 ATTGCTATGAGAAACTGAATATTGAAGGGACGGAGAAGGGTAACTGTGGGAAAGACAAAGACACATGGATACAG 1776
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1777 TGCAACAAACGGGATGTGCTTTGTGGTTACCTTTTGTGTACCAATATTGGCAATATCCCAAGGCTTGGAGAACT 1850
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1851 CGATGGTGAAATCACATCTACTTTAGTTGTGCAGCAAGGAAGAACATTAAACTGCAGTGGTGGGCATGTTAAGC 1924
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1925 TTGAAGAAGATGTAGATCTTGGCTATGTGGAAGATGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGAACAC 1998
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1999 AGGTGTCTTCCTGTGGCTTCTTTCAACTTTAGTACTTGCTTGAGCAGTAAAGAAGGCACTATTTGCTCAGGAAA 2072
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2073 TGGAGTTTGCAGTAATGAGCTGAAGTGTGTGTGTAACAGACACTGGATAGGTTCTGATTGCAACACTTACTTCC 2146
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2147 CTCACAATGATGATGCAAAGACTGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCACCAATATCATAATAGGC 2220
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2221 ATAATTGCTGGCACCATTTTAGTGCTGGCCCTCATATTAGGAATAACTGCGTGGGGTTATAAAAACTATCGAGA 2294
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2295 ACAGAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAGGATTCCAGACACAAAACATATTTCAGACATCTGTG 2368
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2369 AAAATGGGCGACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGGCAAAAGA 2442
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2443 TTTAGACCTCGGTCTAATTCAACTGAGAGGGAGCCCCAAGCACCTGAGCCTGGGCACTCCCTCGCCCAGACAGT 2516
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2517 CCCATCCCAAGGCATAAGCCCAGGGGGCTCTGACAGCCCCCAGACAGGGAGTCTGGATCACAGGTATTTAAACC 2590
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2591 CATGGTTCAAAAGAGACTATAATGTAGCTAAGTGGGTAGAAGATGTGAATAAAAACACTGAAGGACCATACTTT 2664
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2665 AGGACTTTATCTCCTGCCAAGTCTCCTTCTTCATCAACTGGGTCTATTGCCTCCAGCAGAAAATACCCTTACCC 2738
Query 1027 ---------------------------------------------------------------------- 1026
Sbjct 2739 AATGCCTCCACTTCCTGATGAGGACAAGAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGACATCCATT 2808
