Nucleotide Global Alignment
Description
- Query:
- TRCN0000473520
- Subject:
- XM_011516324.2
- Aligned Length:
- 3003
- Identities:
- 787
- Gaps:
- 2199
Alignment
Query 1 ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACCTGCCCTCCGGCGCGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCGACACGCGGGTG 222
|.||.|||| |.|..||
Sbjct 1 ------------------------------------ATGATGAAA---------AAGGCCT------------- 16
Query 223 CGGGGCGACGTCGGTGGCCCGCAGTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTC 296
.||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 ----------------ACCAGGAGTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTC 74
Query 297 ATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATTCATTCTCGATGTCGTGCTAAATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAG 148
Query 371 GCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAAGACTGTGGAAGTTAAAGGAGGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTT 222
Query 445 GTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTTGCATTGTCAACATGCCACGGACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGA 296
Query 519 AGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAAAATGACACTACTCAAGAGGATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGG 370
Query 593 ATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGATCTTCCATCTGAATTTCAGCAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGG 444
Query 667 AGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTAAACGGCAGCTTCGTCGATATCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAA 518
Query 741 TGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATCACCTTATGTTTAAAAAACATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACA 592
Query 815 TGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGCAGATTTAATATATAAAGACCAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGAC 666
Query 889 AACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACAAGTTTGCCATATCTGAAAATCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAA 740
Query 963 AGAGAAAAGTGATGCAGTTCACCTTTTTTC-GTACGTAACTT-------------------------------- 1003
|||||||||||||||||||||||||||||| |.|.||.|.||
Sbjct 741 AGAGAAAAGTGATGCAGTTCACCTTTTTTCGGGAAGTCAATTTGAGAGTAGCCGGAGCGGGGCAGCTTATATTG 814
Query 1004 -----------------CTGTAATG-----------ATGTATT-------ACTTTTTT---------------- 1026
|||.||.| |||.||| |||..|||
Sbjct 815 GTGGGATTTGCTCGTTGCTGAAAGGAGGAGGCGTGAATGAATTTGGGAAAACTGATTTAATGGCTGTTACACTT 888
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 889 GCCCAGTCATTAGCCCATAATATTGGTATTATCTCAGACAAAAGAAAGTTAGCAAGTGGTGAATGTAAATGCGA 962
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 963 GGACACGTGGTCCGGGTGCATAATGGGAGACACTGGCTATTATCTTCCTAAAAAGTTCACCCAGTGTAATATTG 1036
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1037 AAGAGTATCATGACTTCCTGAATAGTGGAGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCTTGATCCT 1110
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1111 CCTGAGTGTGGCAATGGCTTCATTGAAACTGGAGAGGAGTGTGATTGTGGAACCCCGGCCGAATGTGTCCTTGA 1184
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1185 AGGAGCAGAGTGTTGTAAGAAATGCACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCTGTAAAAAGT 1258
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1259 GCAAGTTTCAGCCTATGGGCACTGTGTGCCGAGAAGCAGTAAATGATTGTGATATTCGTGAAACGTGCTCAGGA 1332
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1333 AATTCAAGCCAGTGTGCCCCTAATATTCATAAAATGGATGGATATTCATGTGATGGTGTTCAGGGAATTTGCTT 1406
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1407 TGGAGGAAGATGCAAAACCAGAGATAGACAATGCAAATACATTTGGGGGCAAAAGGTGACAGCATCAGACAAAT 1480
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1481 ATTGCTATGAGAAACTGAATATTGAAGGGACGGAGAAGGGTAACTGTGGGAAAGACAAAGACACATGGATACAG 1554
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1555 TGCAACAAACGGGATGTGCTTTGTGGTTACCTTTTGTGTACCAATATTGGCAATATCCCAAGGCTTGGAGAACT 1628
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1629 CGATGGTGAAATCACATCTACTTTAGTTGTGCAGCAAGGAAGAACATTAAACTGCAGTGGTGGGCATGTTAAGC 1702
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1703 TTGAAGAAGATGTAGATCTTGGCTATGTGGAAGATGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGAACAC 1776
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1777 AGGTGTCTTCCTGTGGCTTCTTTCAACTTTAGTACTTGCTTGAGCAGTAAAGAAGGCACTATTTGCTCAGGAAA 1850
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1851 TGGAGTTTGCAGTAATGAGCTGAAGTGTGTGTGTAACAGACACTGGATAGGTTCTGATTGCAACACTTACTTCC 1924
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1925 CTCACAATGATGATGCAAAGACTGGTATCACTCTGTCTGGCAATGGTGTTGCTGGCACCAATATCATAATAGGC 1998
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 1999 ATAATTGCTGGCACCATTTTAGTGCTGGCCCTCATATTAGGAATAACTGCGTGGGGTTATAAAAACTATCGAGA 2072
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2073 ACAGAGACAGTTACCCCAGGGAGATTATGTAAAAAAGCCTGGAGATGGTGACTCTTTTTATAGCGACATTCCTC 2146
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2147 CCGGAGTCAGCACAAACTCAGCATCTAGTTCTAAGAAGAGGTCTGCTTTTCTGTCGCATTTTCAGATTTCTACC 2220
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2221 TGTTCCATCACACATTATTCCATTAGTCAGAACATTTCATTATTTTGCAGCAGGTCAAATGGGCTCTCTCATTC 2294
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2295 TTGGAGTGAAAGGATTCCAGACACAAAACATATTTCAGACATCTGTGAAAATGGGCGACCTCGAAGTAACTCTT 2368
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2369 GGCAAGGTAACCTGGGAGGCAACAAAAAGAAAATCAGAGGCAAAAGATTTAGACCTCGGTCTAATTCAACTGAG 2442
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2443 AGGGAGCCCCAAGCACCTGAGCCTGGGCACTCCCTCGCCCAGACAGTCCCATCCCAAGGCATAAGCCCAGGGGG 2516
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2517 CTCTGACAGCCCCCAGACAGGGAGTCTGGATCACAGGTATTTAAACCCATGGTTCAAAAGAGACTATAATGTAG 2590
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2591 CTAAGTGGGTAGAAGATGTGAATAAAAACACTGAAGGACCATACTTTAGGACTTTATCTCCTGCCAAGTCTCCT 2664
Query 1027 -------------------------------------------------------------------------- 1026
Sbjct 2665 TCTTCATCAACTGGGTCTATTGCCTCCAGCAGAAAATACCCTTACCCAATGCCTCCACTTCCTGATGAGGACAA 2738
Query 1027 ------------------------------------------- 1026
Sbjct 2739 GAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGACATCCATT 2781
