Nucleotide Global Alignment

Description

Query:
TRCN0000473520
Subject:
XM_017012330.2
Aligned Length:
2856
Identities:
1016
Gaps:
1830

Alignment

Query    1  ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACCTGCCCTCCGGCGCGCTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGGCGGCAGTGGCTGTGTCCGTGCCCTTCTTGCTGCTCTGTGTCCTGGGGACCTGCCCTCCGGCGCGCTG  74

Query   75  CGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGCCAGGCAGGAGACGCCTCATTGATGGAGCTAGAGAAGAGGAAGGAAAACCGCTTCGTGGAGCGCCAGAGCA  148

Query  149  TCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCGACACGCGGGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCGTGCCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTCGGCACGACGCGCTCGACACGCGGGTG  222

Query  223  CGGGGCGACGTCGGTGGCCCG---------------------------------------------------CA  245
            |||||||||.|||||||||||                                                   ||
Sbjct  223  CGGGGCGACCTCGGTGGCCCGCAGATTCAGATGTTTTTGAAGTCAGAATCCCAGAAGACCATATACCAGATACA  296

Query  246  GTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAA  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTGACTCATGTTGACCAAGCAAGCTTCCAGGTTGATGCCTTTGGAACGTCATTCATTCTCGATGTCGTGCTAA  370

Query  320  ATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAGGCAAGACTGTGGAAGTTAAAGGA  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCATGATTTGCTGTCCTCTGAATACATAGAGAGACACATTGAACATGGAGGCAAGACTGTGGAAGTTAAAGGA  444

Query  394  GGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTTGTTGCATTGTCAACATGCCACGG  467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGAGAGCACTGTTACTACCAGGGCCATATCCGAGGAAACCCTGACTCATTTGTTGCATTGTCAACATGCCACGG  518

Query  468  ACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGAAGAAAATGACACTACTCAAGAGG  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACTTCATGGGATGTTCTATGACGGGAACCACACATATCTCATTGAGCCAGAAGAAAATGACACTACTCAAGAGG  592

Query  542  ATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGGATGATCTTCCATCTGAATTTCAG  615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATTTCCATTTTCATTCAGTTTACAAATCCAGACTGTTTGAATTTTCCTTGGATGATCTTCCATCTGAATTTCAG  666

Query  616  CAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGGAGTAAACGGCAGCTTCGTCGATA  689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAAGTAAACATTACTCCATCAAAATTTATTTTGAAGCCAAGACCAAAAAGGAGTAAACGGCAGCTTCGTCGATA  740

Query  690  TCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAATGATCACCTTATGTTTAAAAAAC  763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCCTCGTAATGTAGAAGAAGAAACCAAATACATTGAACTGATGATTGTGAATGATCACCTTATGTTTAAAAAAC  814

Query  764  ATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACATGGCAGATTTAATATATAAAGAC  837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCGGCTTTCCGTTGTACATACCAATACCTATGCGAAATCTGTGGTGAACATGGCAGATTTAATATATAAAGAC  888

Query  838  CAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAA  911
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAACTTAAGACCAGGATAGTATTGGTTGCTATGGAAACCTGGGCGACTGACAACAAGTTTGCCATATCTGAAAA  962

Query  912  TCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGCAGTTCACC  985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCCATTGATCACCCTACGTGAGTTTATGAAATACAGGAGGGATTTTATCAAAGAGAAAAGTGATGCAGTTCACC  1036

Query  986  TTTTTTC-GTACGTAACTT-------------------------------------------------CTGTAA  1009
            ||||||| |.|.||.|.||                                                 |||.||
Sbjct 1037  TTTTTTCGGGAAGTCAATTTGAGAGTAGCCGGAGCGGGGCAGCTTATATTGGTGGGATTTGCTCGTTGCTGAAA  1110

Query 1010  TG-----------ATGTATT-------ACTTTTTT---------------------------------------  1026
            .|           |||.|||       |||..|||                                       
Sbjct 1111  GGAGGAGGCGTGAATGAATTTGGGAAAACTGATTTAATGGCTGTTACACTTGCCCAGTCATTAGCCCATAATAT  1184

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1185  TGGTATTATCTCAGACAAAAGAAAGTTAGCAAGTGGTGAATGTAAATGCGAGGACACGTGGTCCGGGTGCATAA  1258

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1259  TGGGAGACACTGGCTATTATCTTCCTAAAAAGTTCACCCAGTGTAATATTGAAGAGTATCATGACTTCCTGAAT  1332

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1333  AGTGGAGGTGGTGCCTGCCTTTTCAACAAACCTTCTAAGCTTCTTGATCCTCCTGAGTGTGGCAATGGCTTCAT  1406

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1407  TGAAACTGGAGAGGAGTGTGATTGTGGAACCCCGGCCGAATGTGTCCTTGAAGGAGCAGAGTGTTGTAAGAAAT  1480

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1481  GCACCTTGACTCAAGACTCTCAATGCAGTGACGGTCTTTGCTGTAAAAAGTGCAAGTTTCAGCCTATGGGCACT  1554

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1555  GTGTGCCGAGAAGCAGTAAATGATTGTGATATTCGTGAAACGTGCTCAGGAAATTCAAGCCAGTGTGCCCCTAA  1628

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1629  TATTCATAAAATGGATGGATATTCATGTGATGGTGTTCAGGGAATTTGCTTTGGAGGAAGATGCAAAACCAGAG  1702

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1703  ATAGACAATGCAAATACATTTGGGGGCAAAAGGTGACAGCATCAGACAAATATTGCTATGAGAAACTGAATATT  1776

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1777  GAAGGGACGGAGAAGGGTAACTGTGGGAAAGACAAAGACACATGGATACAGTGCAACAAACGGGATGTGCTTTG  1850

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1851  TGGTTACCTTTTGTGTACCAATATTGGCAATATCCCAAGGCTTGGAGAACTCGATGGTGAAATCACATCTACTT  1924

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1925  TAGTTGTGCAGCAAGGAAGAACATTAAACTGCAGTGGTGGGCATGTTAAGCTTGAAGAAGATGTAGATCTTGGC  1998

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1999  TATGTGGAAGATGGGACACCTTGTGGTCCCCAAATGATGTGCTTAGAACACAGGTGTCTTCCTGTGGCTTCTTT  2072

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2073  CAACTTTAGTACTTGCTTGAGCAGTAAAGAAGGCACTATTTGCTCAGGAAATGGAGTTTGCAGTAATGAGCTGA  2146

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2147  AGTGTGTGTGTAACAGACACTGGATAGGTTCTGATTGCAACACTTACTTCCCTCACAATGATGATGCAAAGACT  2220

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2221  GGTATCACTCTGTCTGGCAATGGTGTTGCTGGCACCAATATCATAATAGGCATAATTGCTGGCACCATTTTAGT  2294

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2295  GCTGGCCCTCATATTAGGAATAACTGCGTGGGGTTATAAAAACTATCGAGAACAGAGACAGTTACCCCAGGGAG  2368

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2369  ATTATGTAAAAAAGCCTGGAGATGGTGACTCTTTTTATAGCGACATTCCTCCCGGAGTCAGCACAAACTCAGCA  2442

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2443  TCTAGTTCTAAGAAGAGGTCTGCTTTTCTGTCGCATTTTCAGATTTCTACCTGTTCCATCACACATTATTCCAT  2516

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2517  TAGTCAGAACATTTCATTATTTTGCAGCAGGTCAAATGGGCTCTCTCATTCTTGGAGTGAAAGGATTCCAGACA  2590

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2591  CAAAACATATTTCAGACATCTGTGAAAATGGGCGACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAGGCAAC  2664

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2665  AAAAAGAAAATCAGAGGCAAAAGATTTAGACCTCGGTCTAATTCAACTGAGACTTTATCTCCTGCCAAGTCTCC  2738

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 2739  TTCTTCATCAACTGGGTCTATTGCCTCCAGCAGAAAATACCCTTACCCAATGCCTCCACTTCCTGATGAGGACA  2812

Query 1027  --------------------------------------------  1026
                                                        
Sbjct 2813  AGAAAGTGAACCGACAAAGTGCCAGGCTATGGGAGACATCCATT  2856

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