Nucleotide Global Alignment
Description
- Query:
- TRCN0000473566
- Subject:
- XM_006497604.2
- Aligned Length:
- 4831
- Identities:
- 652
- Gaps:
- 4148
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAAGTGTGGCTTGGAATGTCCTCTTATTCTTCCCAAGATGCAACTCCAGTAGTACCTTCACGGGCGGCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCAAGATCAGTAAGAAACAAGTCTCATGAAGGAATTACAAATTCTGTAATGCCAGAATGTAAGAATCCTTTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTTAATGACTGGATCATCAAATGCCATGGGAAGGCTATACATGCAAGACCTGCCTGGAAGCCAGCAGCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCACCCTGTCTACCCCCGCCAGAGATTGGGCAGTAGTGAGCATGGACAGAAATCTCCATTTCGTGGCAGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAGGCCTGCCTAGCCCAGCATCATCAGGGTCTCAGATCTATGGAGATGGCTCAATCTCTCCAAGGACTGACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCTCGGAAGCCCTGATGTCTTCACAAGAAATAACCCTGGTTTTCATGGAGCTCCCAATTCCAGCCCTATTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTAAATAGGACTCCTCTTTCTCCACCTTCAGTAATGCTACATGGTTCTCCCGTACAGTCATCCTGTGCAATGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAAGAACTAATATACCTCTTTCCCCAACCTTGACTACAAAGAGTCCAGTAATGAAAAAACCAATGTGTAATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTCAACTAATATGGAAATACCACGAGCAATGTTCCACCACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTCTTGTGCTCTTCAGAAAAAGCCATTAACATCTGAGAAAGATCCACTTGGCATTCTTGACCCTATTCCTAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAACCAGTGAATCAGAACCCTATTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGATGAATGTAAGCATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCTTTGCCAACTGTAAAACCTGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATATGAATCATGGGAGTCATGTACAAAGAATTCAGCATTCAGCTTCAACCTCCCTGTCCCCTTCTCCAGTGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCCCCAGTGCACATGATGGGGACTGGAATTGGAAGGATTGAGGCATCGCCCCAAAGATCACGCTCATCTTCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCATCAGATCATGGAAATTTCATGATGCCACCTGTAGGACCCCAGGCCACTTGTAGTGGCATAAAGGTTCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTAGGTCACCAAGGTCAACAATAGGTTCCCCAAGGCCATCAATGCCATCAAGCCCTTCTACCAAGTCTGATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATCATCAGTACAAGGATATCCCTAACCCATTAATTGCTGGAATGAGTAATGTACTCAATACCCCAAGCAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCTTTTCCTACTGCACCTGCCGGAAATGGTTCTGTAAAGAGTCAGCCTGGTTTGCTGGGAATGCCTTTAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGATCTTGAACCAGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAACAATTCTGGAGCTGTTGCCAGCAGCGGCA 1480
Query 1 -----------------------------ATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGG 45
|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct 1481 ACACTGAAGGACACAGCACTTTAAACACCATGTTCCCTCCAACTGCCAACATGCTTCTCCCAACAGGTGAAGGT 1554
Query 46 CAAAGTGGTCGAGCAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACAACC 119
||||||||||||||||||||||||||||||.||||||||||||||||||||.||||.|||||||||||.||.||
Sbjct 1555 CAAAGTGGTCGAGCAGCACTAAGAGATAAGTTGATGTCTCAGCAAAAAGACTCATTACGGAAAAGAAAGCAGCC 1628
Query 120 ACCTACGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTGACT 193
|||.||.||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||||||||||||
Sbjct 1629 ACCCACCACAGTGTTGAGTTTGCTCAGACAGTCCCAAATGGATAGTTCTGCAGCTCCTAAACCTGGACCTGACT 1702
Query 194 TGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAA 267
|||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGCTAAGGAAGCATGGGCAGGGGTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAA 1776
Query 268 AGCTCTCACTTGAGTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAACCA 341
||||||||||||||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||
Sbjct 1777 AGCTCTCACTTGAGTAGCAATAGTACCCCGGGTTGTGGGGGATCAAATACTGCTTTGCCTTGCTCTGCTAACCA 1850
Query 342 GCTGCATTTTACAGATCCCAGTATGAACTCTAGTGTTCTTCAGAA---------------CATACCTTTAAGAG 400
||||||||||.|||||||.|.||||||.||.|.|||||||||||| ||||||||||||||
Sbjct 1851 GCTGCATTTTCCAGATCCTAATATGAATTCCACTGTTCTTCAGAATTCACTGACACAGAGCATACCTTTAAGAG 1924
Query 401 GGGAAGCCGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GGGAAGCCGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTT 1998
Query 475 GCAGGTTTAATAAATCAGATTCAGGCTAGCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAA 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GCAGGTTTAATAAATCAGATTCAGGCTAGCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAA 2072
Query 549 TTCCTTACATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTA 622
.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTCATTACATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTA 2146
Query 623 GCAGCTATAATCAAACAAGTTCTGAAGCAGGTATGGTT---------------------TTAT---TAGAAAAA 672
||||||||||||||||||||||||||||||| ||||| .||| |.|.|..|
Sbjct 2147 GCAGCTATAATCAAACAAGTTCTGAAGCAGG--TGGTTCAAGCCTGCCGTCCTCCATAGCTATAGCTGGCAGCA 2218
Query 673 AGTACC---------CAAAGGTAC-------------------------------------------------- 687
|..||| ||||| ||
Sbjct 2219 ACCACCCTGCCATCACAAAG--ACAACATCTGTTCTCCAAGATGGTGTCATAGTCACCACCGCAGCTGGAAACC 2290
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2291 CACTGCAGAGTCAGCTGCCCATTGGGAGTGACTTTCCTTTTGTTGGCCAAGAGCATGCCCTTCATTTTCCATCC 2364
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2365 AACAGCACCGCAAACAACCATCTTCCACACCCCTTGAACCCCAGCCTCCTCAGCTCTCTACCTATCTCTTTGCC 2438
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2439 AGTGAATCAACAGCATCTCCTAAACCAGAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGAAGGCAAGTCTG 2512
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2513 AGATCAACCTCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGCTGCTTTAGCTTTCCTCTCCGGTGACGTG 2586
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2587 GATGGGCAGGTATTACAGCCTGTCCACTTTCAGCTCTTAGCAGCCCTGCTTCAGAACCAAGCCCAAGCAGCTGC 2660
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2661 CATGCTTCCCCTGCCGTCTTTCAATCTGACCATCTCAGATCTTTTGCAACCGCAAAATACCCCTTTACCCTTAT 2734
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2735 TAACACAGATGACAGCCCCACCAGACCGTTTGCCAAGCAATCAGTCAGACAACAGCCGAGCTGATACCCTTTTA 2808
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2809 GGCAGCCCCCTGGGAAACCCTTTAGCAGGCAGTGACACTACTTTTAACCCCCTGCTCCTCCCAGCTGTCACTGG 2882
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2883 GGCCTCAGGATTAATGGCCTTGAATCCCCAGCTGTTGGGGGGTGTCCTGAACTCGGCATCGGCCAACACCGCTA 2956
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2957 TTCATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCAACCACTACCACAACCACTACATCATCAGCAGTGGCA 3030
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3031 GCACTGACTGTCTCAACACTTGGTGGGACAGCAGTGGTGTCAATGGCAGAAACATTGCTGAATATATCTAATAA 3104
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3105 TGCTGGGAATCCACCTGGTCCAGCTAAACTCAACAGTAACTCTATGGTGCCACAGCTACTTAACCCTCTACTGG 3178
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3179 GGACAGGTCTGCTTGGTGATATATCATCCATAAACAATTCATTGAATAACCATCAACTGACTCATCTACAGTCG 3252
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3253 CTACTAAACAGCAATCAGATGTTTCCTCCAAATCAGCAGCCGCAGCAACACCTTCTCCAGGGACACCAGAATCT 3326
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3327 CCAGGCCTTCCAAGGACAACCCACAGTCCCTTGCCCAGCTAACAATAACCCCATGGCTTGTCTGTTTCAGAACT 3400
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3401 TCCAGGTGAGGATGCAAGGAGATGCAGCTCTTCTAAATAAAAGAATAAGCACTCAGCCTGGGCTCACAACACTT 3474
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3475 CCTGAAAACCCAAACCTTGCACTTCCACATTTCCAAGATACACCCTGTGAGCTGCAGCCAAGGATTGACCTTGG 3548
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3549 TCAGCCTATGAAGGACGGCCTCGTTATGGGTGGCCAAGGAGATGCCTCCGTAGACGCCATTTACAAAGCAGTTG 3622
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3623 TGGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCTGTCAACAGCACGACTCAAATCAGCCCTATC 3696
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3697 CCAGCCCTGAGCGCCATGAGTGCCTTCACTGCCTCCATTGGTGACCCATTAAATCTGTCCAGTGCTGTGAGCGC 3770
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3771 TGTCATCCACGGGCGGAACATGGGAGGAGTGGATCATGATGGCAGGCTGAGGAATGCGAGAGGGGCACGGCTAC 3844
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3845 CCAAGAACATAGACCATGGGAAGAACTCCAGCGAAGGAGACGGGTTTGAGTGTTTCAAGTCAGCGAGCTGCCAC 3918
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3919 ACATCCAGAAAACAGTGGGATGGGGAGCAAAGTCCCAGAGGGGAGCGCAACAGGTGGAAGTATGAGGAGTTTTT 3992
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3993 AGATCATCCAGGCCATATCCACAGTAGTCCTTGCCACGAAAGGCCCAACAATGTCTCTACACTGCCATTTCTAG 4066
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4067 CTGGGGAACAGCACCCGATACTGTTACCACCAAGAAACTGTCAAGGTGATAAGATTCTGGAGGAAAATTTCAGG 4140
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4141 TATAATAATTACAAAAGAACTATGATGAGTTTTAAAGAGAGACTAGAGAGTACTGTGGAGAGATGTACACACAT 4214
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4215 TAACGGAAACAGACCTCGTCAGAGTCGGGGCTTTGGAGAGCTGCTAGGCACTGCAAAACAAGACCTAGTTCTAG 4288
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4289 AGGGGCAGTCTCCGGGTTCTTCAAATAGTTTGGAAAGTTCTCTGGTCAAAGACTACATCCATTACAATGGAGAC 4362
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4363 TTTAATGCCAAAACCATTAATGGGTGTGTGCCTAGTCCCTCAGATGCTAAAAGCATTAGTAGTGAAGACGACCT 4436
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4437 ACGGAATCCAGACTCCCCCTCCTCACATGAGTTGATACACTATAGACCAAGGACGTTCAACGTTGGCGACTTGG 4510
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4511 TCTGGGGCCAAATCAAAGGACTGACTTCCTGGCCTGGGAAATTCATAAGAGAAGACGACGTTCACAATTCATGC 4584
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4585 CAACAAAGCCCCGAGGAAGGGAAGGTGGAGCCCGAGAAGTTGAAGACTCTCACAGAAGGTTTAGAAGCCTACAG 4658
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4659 CCGCGTCCGGAAAAGGAGCAGAAAAAGTGGGAAACTAAATAACCATTTAGAAGCTGCTATTCACGAGGCCATGA 4732
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4733 GCGAACTGGACAAAATGTCTGGGACTGTTCACCAAATCCCACAGGGTGACAGACAAATGAGGCCCCCCAAACCC 4806
Query 688 --------------------- 687
Sbjct 4807 AAGAGGAGGAAGATCTCCAGA 4827
