Nucleotide Global Alignment
Description
- Query:
- TRCN0000473566
- Subject:
- XR_002959319.1
- Aligned Length:
- 4865
- Identities:
- 671
- Gaps:
- 4190
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCAGACAGGTACCAGCATTGGTGAATTATGATTTTCCTTAGTCAGAAGCACTCATTTTTACCCATGTAGACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCCTTAGGAATTAAATATTGGTTATTTAATGTAGATTATAATGGGAAGCTGATTTTTTTCACAATGGCATATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGGACTTGGTTCCAAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGTCTGGGAAAAACTGTGCTGCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCCCACTTTTGAAGGCCATCATGCTCTGTAATATAAGGATATCATCTTATTGCTGATATCTTTGGAGAGTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAGCAGACACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTTCCTGTGGGTTGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTATGTCAGTCCCAGTGGGTCTTTGTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTTGCTTGGAGCAGGTTAAAACATACCTGCTTACTGATGGAACATGCAAGTGTGGCTTGGAATGTCCTCTTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTCCCAAGGTATTTAATTTTGATCCTGGAGCTGCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCAGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGATGTCACAAAGCTATGCATACATAAAAGAAAAATTATTGCAGTGGCCACACTTCATAAAAGCATGGAAGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGGGCAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTCCAAGATCAGTAAGAAATAAGTCTCATGAAGGAATTACAAATTCTGTAATGCCTGAATGTAAGAATCCTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAAGTTAATGATTGGATCATCAAATGCCATGGGAAGGCTATATGTACAAGAACTGCCTGGAAGCCAACAACAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAACTCCACCCTGTCTACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCATGGAGGCCTGCCCAGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAAGGACTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCACTTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTCTAGTCCTATT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACCTGAATAGGACTCCTCTTTCTCCACCTTCAGTAATGCTACATGGTTCTCCTGTACAGTCATCCTGTGCAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTGGAAGGACTAATATACCTCTTTCCCCAACCTTGACTACAAAGAGTCCAGTAATGAAAAAACCAATGTGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTTTTCAACTAATATGGAAATACCACGAGCAATGTTCCACCACAAACCACCCCAAGGCCCACCTCCCCCTCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAACATCTGAGAAAGATCCACTTGGCATTCTTGACCCTATTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGTAAACCAGTGAATCAGAACCCTGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTATGATGAATGTAAGCATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGTCACATGAATCATGGGAGTCATGTACAAAGAGTTCAGCATTCAGCTTCAACCTCCCTGTCCCCTTCTCCAGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACATCCCCCGTGCACATGATGGGGACTGGAATTGGAAGGATTGAGGCATCGCCCCAAAGATCACGCTCATCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCACATCATCAGATCATGGAAATTTCATGATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGGTATTAAGGTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGCCATCAATGCCATCAAGCCCTTCTACCAAGTCCGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGACATCATCAGTACAAGGATATCCCTAACCCATTAATTGCTGGAATAAGTAATGTACTAAATACCCCAAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGTTCTGTAAAGAGTCAGCCTGGTTTGCTGGGAATGCCTTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATCAGATCTTGAACCAGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTAGCAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTG 2146
Query 1 --------------------------------ATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAA 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCAACACTGAAGGACATAGCACTTTAAACACCATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAA 2220
Query 43 GGGCAAAGTGGTCGAGCAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACA 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGGCAAAGTGGTCGAGCAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACA 2294
Query 117 ACCACCTACGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ACCACCTACGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTG 2368
Query 191 ACTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGT 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGT 2442
Query 265 CAAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CAAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAA 2516
Query 339 CCAGCTGCATTTTACAGATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGC 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCAGCTGCATTTTACAGATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGC 2590
Query 413 ACTGCCACAATGCAAACACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ACTGCCACAATGCAAACACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATA 2664
Query 487 AATCAGATTCAGGCTAGCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCC 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AATCAGATTCAGGCTAGCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCC 2738
Query 561 CAATCCACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATC 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CAATCCACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATC 2812
Query 635 AAACAAGTTCTGAAGCAGGTATGGTT--------TTAT------TAGAAAAAAGTACCCAAA---GGTAC---- 687
||||||||||||||||||| .|||| |.|| ||| |||.| ||.||
Sbjct 2813 AAACAAGTTCTGAAGCAGG--CGGTTCAGGACCATCATCCTCCATAG----------CCATAGCGGGCACCAAC 2874
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2875 CACCCTGCCATCACAAAGACAACATCTGTTCTTCAAGATGGCGTCATAGTCACCACTGCAGCTGGAAACCCACT 2948
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2949 GCAGAGTCAGCTACCCATTGGGAGTGATTTTCCTTTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCCAACA 3022
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3023 GCACTTCAAACAACCATCTTCCACACCCCTTGAACCCCAGCCTCCTCAGTTCTCTACCTATCTCTTTGCCAGTG 3096
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3097 AATCAACAGCATCTCCTAAACCAGAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGAAGGTGATATGTCATC 3170
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3171 AATAAACAATACTTTGAGTAACCATCAACTGACTCATCTACAGTCGCTGTTAAACAACAATCAGATGTTTCCTC 3244
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3245 CAAATCAGCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATTCCT 3318
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3319 TGCCCAGCTAACAATAACCCCATGGCTTGTCTGTTTCAGAACTTTCAGGTGAGAATGCAGGAAGATGCAGCTCT 3392
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3393 CCTAAACAAAAGAATAAGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTT 3466
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3467 TTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTT 3540
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3541 GTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCA 3614
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3615 GGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATGAGTGCCT 3688
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3689 TCACTGCCTCAATTGGTGACCCATTAAATCTCTCCAGTGCTGTCAGTGCGGTCATTCATGGACGGAACATGGGA 3762
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3763 GGTGTTGATCATGATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGGGAAAAA 3836
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3837 TGTGAACGAAGGAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACATCCAAAAAACAGTGGGACGGGG 3910
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3911 AGCAAAGCCCCAGAGGGGAGCGAAACAGGTGGAAGTACGAGGAATTTTTAGATCATCCAGGCCATATCCACAGT 3984
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3985 AGTCCTTGTCATGAAAGGCCCAACAATGTCTCTACACTGCCATTTCTGCCTGGGGAACAGCACCCAATACTGTT 4058
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4059 ACCACCAAGAAACTGTCCAGGGGATAAAATTCTAGAGGAAAATTTCAGGTATAATAACTACAAAAGAACTATGA 4132
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4133 TGAGTTTTAAGGAGAGACTAGAGAACACTGTGGAAAGATGTGCACACATAAATGGGAATAGACCTCGACAGAGT 4206
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4207 CGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAA 4280
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4281 TAGTTTGGAAAATTCTCTGGTCAAAGACTACATCCATTACAATGGAGACTTTAATGCCAAAAGCGTTAATGGGT 4354
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4355 GTGTGCCTAGCCCTTCAGATGCTAAAAGCATTAGTAGTGAAGATGACCTAAGGAACCCAGACTCCCCCTCTTCA 4428
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4429 AATGAATTGATACATTATAGACCAAGGACGTTCAATGTTGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGAC 4502
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4503 TTCCTGGCCTGGAAAATTAGTAAGAGAAGACGACGTTCACAATTCATGTCAACAAAGCCCCGAGGAAGGGAAGG 4576
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4577 TATACCAATCTTTATCCATTGTCAAATACTAACCTTTGTTCAGATATCAATTATTGCTTTTTGTTATCATCACT 4650
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4651 TTGGATTCTTTGGATTTGAAATTAGGATTCTTCATGACTCATTGAGGTCTCACAAGCTTCTGGAGCATAAAATG 4724
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4725 AAGAGGGGATGGTTATAGTCAACAAAATGTCGTATCAACAAGGGGTGGAGCCCGAGAAGTTGAAGACACTAACA 4798
Query 688 ------------------------------------------------------- 687
Sbjct 4799 GAAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC 4853
