Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- NR_125356.1
- Aligned Length:
- 3409
- Identities:
- 1556
- Gaps:
- 1852
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACATGGGCAAAGGCCAACAGCAATGGCAGAAACAAGAGCAGATAGTCAACAAAGGGCTATCTCTTTAGCTACTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTCAGTTTCTGGAAAAACGACTATAAAAACCCAGAACCATGCTGCATCTTTGCGAACCTGAGTCAAGACGGA 148
Query 1 ATG------GACGGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAG 68
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGCTGAGTGA--GAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAG 220
Query 69 TGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 TGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTA 294
Query 143 AAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAA 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 AAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAA 368
Query 217 ACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGC 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 ACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGC 442
Query 291 ATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTC 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 ATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTC 516
Query 365 GTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCT 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 GTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCT 590
Query 439 CAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAG 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 CAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAG 664
Query 513 TGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCTGTAACACTTGATG 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 TGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCTGTAACACTTGATG 738
Query 587 TTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAATAACCAGTTTCAA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 TTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAATAACCAGTTTCAA 812
Query 661 GCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAA 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 GCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAA 886
Query 735 TGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTA 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTA 960
Query 809 GGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTT 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTT 1034
Query 883 GCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGC 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGC 1108
Query 957 TGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCA 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 TGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCA 1182
Query 1031 ATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGATGTGCAGCGTGTG 1104
||||||||||||| |||||||||||||||||||||||||||
Sbjct 1183 ATTTAAATGAAGA----------------------------------GGTGTTTATGGAGATGTGCAGCGTGTG 1222
Query 1105 AAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAA 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 AAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAA 1296
Query 1179 TCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTAC 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 TCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTAC 1370
Query 1253 CTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCT 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371 CTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCT 1444
Query 1327 GGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 GGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGC 1518
Query 1401 AGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATC 1474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1519 AGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCA---AGATC 1589
Query 1475 ACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAAC 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1590 ACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAAC 1663
Query 1549 CTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAATT-------------------------- 1596
|||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1664 CTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAATTTAAAAATGGGAAGATGAAGATTGGGG 1737
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1738 GTGAATCACATTGTTCAATGTCATCACCTATTTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTTTTTTTG 1811
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1812 TTTTTGTTTTTTTGGGGTTTCTTTTTTTTTTCCATGCTGTTATCATTCCTTGGTTATAAAATGAAATGGCATAT 1885
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1886 GTAAAGGCAGAGTTGTTAACTGCTATATTTCATCTGTTCTATAGGGAAGCCATTTTGTCTGTTTAAAATTTCAG 1959
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1960 TTTAATTTTGCTTTTTTTTTTTTTTTTTTTTTCCTTTCAACTTAGTTGACATACGTGCCTTAAAAAGGAAAACT 2033
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2034 AGTGTTGCTATTGTGCATTTACTAGAAAAAAGGAATTGGTTGTTTAGGGCACACTGTTATATGGGAATTAAAAT 2107
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2108 ATGTTTAGGCAGGGGTGTGTAAAAAGGTTAAGTTTTTGTTTCTCCTGCTTGGAACTTATTTTGAATTACTGGCT 2181
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2182 TGTCACCTTTTTTTCTATTTAATCAAATAAGATACATGATATTGAAAGAATAAAGCAGCATTTTTAGTTTTTAC 2255
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2256 TACCTTAGGCTTTATTGCTTTGAAAACAACATTGGCCTTTTGTATCTCACAATTCTGGTCTAGATTCAGTTATG 2329
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2330 AATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTCTTAAGACAACAAAGTGATTTCTGTAAGT 2403
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2404 TTGAGCCCTATGTGGAAAGCATTGTGGAATCTTAACCTTTTCGTACACACTCTTGTGGGACGTATCATATAAAT 2477
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2478 GTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAGATGTTTTTGAAGTTGACATGACTTACGT 2551
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2552 GCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGGAATATGGTTGTGGATTTCTGAGCATGTG 2625
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2626 CAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAAGATAAAGAAAGTGTACTGCGAAAATATG 2699
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2700 CAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTTTATGTGCCTTTAGTCT 2773
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2774 TAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAATATTTTGTATTTAGGAATAGATCTGACT 2847
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2848 TTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTAATTTGAACAGTTCTTGTCAATCCGAATTGTTGATTC 2921
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2922 TGTTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAAGATTCATAGATTCTGTTATCTATGTAGA 2995
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2996 CAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTTAGAAATGTAAAATTCAGTATAGTTTGAA 3069
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3070 AGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTGGGAGGTTTGATGGTTGTTTAATTTCATTTTGTGTGTA 3143
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3144 CTCTGCTTACCCCTGTAGCATGCTCAATAAACACTTCTGTAGCTCTATATTCACCTTTTCTGTCTTTCTCTGCT 3217
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3218 GCCTTTTCTCTCTCCTCTTCTTTGTTTTCACTCCACTGTGCTTCTGAATTCATGTTTATTCTCTGCCAGGGTGG 3291
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3292 GAAAGGAGTAATAATATTACAATTCTATGGCTTTATACCATAAATAAATCTAGATGCTGTGAAAATAAAAAAAA 3365
Query 1597 ----- 1596
Sbjct 3366 AAAAA 3370
