Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_001737346.2
- Aligned Length:
- 3133
- Identities:
- 1558
- Gaps:
- 1574
Alignment
Query 1 -------------------------------------------ATGGACGGAATCGTCACTGAGGTTGCAGTTG 31
|||||||||||||||||||||||||||||||
Sbjct 1 GCGTGGCTCGGTTCTTGTGAGCGAAGCTTTGTCCGGTTCGGCAATGGACGGAATCGTCACTGAGGTTGCAGTTG 74
Query 32 GCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATG 148
Query 106 GTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGT 222
Query 180 ACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGG 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGG 296
Query 254 TGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACT 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACT 370
Query 328 ATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAA 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAA 444
Query 402 AGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAG 518
Query 476 CAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATA 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATA 592
Query 550 ATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATT 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATT 666
Query 624 GAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAAC 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAAC 740
Query 698 AAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTT 814
Query 772 GTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGG 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGG 888
Query 846 ACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGAGACATCCCTCTT---------------AG 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 889 ACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGGGCTTCCTGTTGCAG 962
Query 905 CTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGA 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGA 1036
Query 979 GTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGAGATGGTTAC 1052
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGA--------- 1101
Query 1053 GCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAG 1126
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 -------------------------GGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAG 1150
Query 1127 ACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 ACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATG 1224
Query 1201 TATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCA 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 TATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCA 1298
Query 1275 AGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACA 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 AGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACA 1372
Query 1349 TTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTG 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTG 1446
Query 1423 TTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATGGCTCTTCTTCAGAT 1496
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1447 TTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCA---AGATCACAAAATGGCTCTTCTTCAGAT 1517
Query 1497 GGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGA 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1518 GGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGA 1591
Query 1571 GAGTGTCTTTCTCAAAGTCAACAATT------------------------------------------------ 1596
|||||||||||||.||||||||||||
Sbjct 1592 GAGTGTCTTTCTCCAAGTCAACAATTTAAAAATGGGAAGATGAAGATTGGGGGTGAATCACATTGTTCAATGTC 1665
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1666 ATCACCTATTTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTTTTTTTGTTTTTGTTTTTTTGGGGTTTCT 1739
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1740 TTTTTTTTTCCATGCTGTTATCATTCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGTTAACTG 1813
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1814 CTATATTTCATCTGTTCTATAGGGAAGCCATTTTGTCTGTTTAAAATTTCAGTTTAATTTTGCTTTTTTTTTTT 1887
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1888 TTTTTTTTTTCCTTTCAACTTAGTTGACATACGTGCCTTAAAAAGGAAAACTAGTGTTGCTATTGTGCATTTAC 1961
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1962 TAGAAAAAAGGAATTGGTTGTTTAGGGCACACTGTTATATGGGAATTAAAATATGTTTAGGCAGGGGTGTGTAA 2035
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2036 AAAGGTTAAGTTTTTGTTTCTCCTGCTTGGAACTTATTTTGAATTACTGGCTTGTCACCTTTTTTTCTATTTAA 2109
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2110 TCAAATAAGATACATGATATTGAAAGAATAAAGCAGCATTTTTAGTTTTTACTACCTTAGGCTTTATTGCTTTG 2183
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2184 AAAACAACATTGGCCTTTTGTATCTCACAATTCTGGTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATT 2257
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2258 AACAAGATGCAGAGTATTAATTTCTTAAGACAACAAAGTGATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCAT 2331
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2332 TGTGGAATCTTAACCTTTTCGTACACACTCTTGTGGGACGTATCATATAAATGTCAGCACTAAGTAATGTCTTG 2405
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2406 TTTGTGGCTGAATATTTTTCGTAGATGTTTTTGAAGTTGACATGACTTACGTGCATTTAAATATATATTGCCAT 2479
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2480 CCTTAGTTTGTAATTAAGATTTGGAATATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAG 2553
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2554 GAACTGGTGCATGTATTTTTCAAAGATAAAGAAAGTGTACTGCGAAAATATGCAGGAAGATTAATTTTGTGGCA 2627
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2628 GTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTTTATGTGCCTTTAGTCTTAATTTACCTTGCATTGTAATA 2701
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2702 TTCAGTTTTAATAAATCTTCAAAATATTTTGTATTTAGGAATAGATCTGACTTTAATAAAAACATGGCTCAGAA 2775
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2776 TCTACAGGTCAAATTAATTTGAACAGTTCTTGTCAATCCGAATTGTTGATTCTGTTTAAATGACCAATACTTTT 2849
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2850 TGAAATTGATGTACTTAGTTTCAAGATTCATAGATTCTGTTATCTATGTAGACAGAATGGTCATGTATATTTTC 2923
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2924 TATTAGTTGAGTTTTTACATCTTTAGAAATGTAAAATTCAGTATAGTTTGAAAGCGGCACAATTAAAAATTAAT 2997
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2998 TTTCTAACAAAGTTGGGAGGTTTGATGGTTGTTTAATTTCATTTTGTGTGTACTCTGCTTACCCCTGTAGCATG 3071
Query 1597 ------------------------- 1596
Sbjct 3072 CTCAATAAACACTTCTGTAGCTCTA 3096
