Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_001737347.2
- Aligned Length:
- 3118
- Identities:
- 1558
- Gaps:
- 1559
Alignment
Query 1 -------------------------------------------ATGGACGGAATCGTCACTGAGGTTGCAGTTG 31
|||||||||||||||||||||||||||||||
Sbjct 1 GCGTGGCTCGGTTCTTGTGAGCGAAGCTTTGTCCGGTTCGGCAATGGACGGAATCGTCACTGAGGTTGCAGTTG 74
Query 32 GCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATG 148
Query 106 GTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGT 222
Query 180 ACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGG 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGG 296
Query 254 TGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACT 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACT 370
Query 328 ATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAA 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAA 444
Query 402 AGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAG 518
Query 476 CAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATA 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATA 592
Query 550 ATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATT 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATT 666
Query 624 GAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAAC 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAAC 740
Query 698 AAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTT 814
Query 772 GTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGG 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGG 888
Query 846 ACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTC 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTC 962
Query 920 TGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGA 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGA 1036
Query 994 GTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTT 1067
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGA------------------------ 1086
Query 1068 TACCCTCTTCGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATAC 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 ----------GGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATAC 1150
Query 1142 AGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATT 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 AGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATT 1224
Query 1216 CGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGA 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 CGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGA 1298
Query 1290 TTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTG 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 TTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTG 1372
Query 1364 CCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGG 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 CCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGG 1446
Query 1438 GGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGA 1511
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 GGCACTGTGAAAGCATTTAAGTTTTTTCA---AGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGA 1517
Query 1512 AGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCAA 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1518 AGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCCA 1591
Query 1586 AGTCAACAATT--------------------------------------------------------------- 1596
|||||||||||
Sbjct 1592 AGTCAACAATTTAAAAATGGGAAGATGAAGATTGGGGGTGAATCACATTGTTCAATGTCATCACCTATTTGACT 1665
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1666 GTTCAGAAAAGTGGGGACCAGAGTTTGATTTTTTTTGTTTTTGTTTTTTTGGGGTTTCTTTTTTTTTTCCATGC 1739
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1740 TGTTATCATTCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGTTAACTGCTATATTTCATCTGT 1813
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1814 TCTATAGGGAAGCCATTTTGTCTGTTTAAAATTTCAGTTTAATTTTGCTTTTTTTTTTTTTTTTTTTTTCCTTT 1887
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1888 CAACTTAGTTGACATACGTGCCTTAAAAAGGAAAACTAGTGTTGCTATTGTGCATTTACTAGAAAAAAGGAATT 1961
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1962 GGTTGTTTAGGGCACACTGTTATATGGGAATTAAAATATGTTTAGGCAGGGGTGTGTAAAAAGGTTAAGTTTTT 2035
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2036 GTTTCTCCTGCTTGGAACTTATTTTGAATTACTGGCTTGTCACCTTTTTTTCTATTTAATCAAATAAGATACAT 2109
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2110 GATATTGAAAGAATAAAGCAGCATTTTTAGTTTTTACTACCTTAGGCTTTATTGCTTTGAAAACAACATTGGCC 2183
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2184 TTTTGTATCTCACAATTCTGGTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGT 2257
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2258 ATTAATTTCTTAAGACAACAAAGTGATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAATCTTAACC 2331
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2332 TTTTCGTACACACTCTTGTGGGACGTATCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATAT 2405
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2406 TTTTCGTAGATGTTTTTGAAGTTGACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATT 2479
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2480 AAGATTTGGAATATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTA 2553
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2554 TTTTTCAAAGATAAAGAAAGTGTACTGCGAAAATATGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGA 2627
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2628 CAACCAGGTGGGACCAAAGTTTATGTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAA 2701
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2702 TCTTCAAAATATTTTGTATTTAGGAATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATT 2775
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2776 AATTTGAACAGTTCTTGTCAATCCGAATTGTTGATTCTGTTTAAATGACCAATACTTTTTGAAATTGATGTACT 2849
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2850 TAGTTTCAAGATTCATAGATTCTGTTATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTT 2923
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2924 TACATCTTTAGAAATGTAAAATTCAGTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTG 2997
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2998 GGAGGTTTGATGGTTGTTTAATTTCATTTTGTGTGTACTCTGCTTACCCCTGTAGCATGCTCAATAAACACTTC 3071
Query 1597 ---------- 1596
Sbjct 3072 TGTAGCTCTA 3081
