Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_001783719.1
- Aligned Length:
- 3523
- Identities:
- 1458
- Gaps:
- 1964
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTTGACCAGGGGGGTAAGCTCTTTGAGGATGAAGAATTTGTAAACGAGGTCTAGGATGCAGCTATAAAGTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTCTCTAGAGCTGAGAGGGCGAAGGGTGCCCGGGCCGGGCCTGGGATTGGTCCTTTGTGGTAATAATGCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAGGTTGGAAGGAAGAGTGGAAGCAGCCTGAGAGCAGCAGGGTTGCAGTCCGGGCTAGCCTGAGGCACACAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGCAGGCTGCAGGCTGTCCCACTCACACCGCCCACGGAAGAGAAAGAACCCAGGTCAGCCAGCCACTGCAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTCGTCTCCGAGGGCGGGAGGCAGTGCGCGCGCGGGCGGGCGGGCGGGCAAGCGGGCGGAGGCAGCCAACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGAGGCGCCCACTCCCCCGGTCCCTGTGCCCCGCCGCTCGTCTCCCGCCGCCGCCGGGCGCCCGCGCGCTCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTCTTTCCGCCGCCGCGCGCTGCCCCGTGCGCTCCGGCACCTTCGGCAATTTCCGTCGGGCCCTGGCCGCCAT 518
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 519 TTTCTCGCCGCTTGTGTGGCTCGCTGGCTGCGTGGCTCGGTTCTTGGGAGCGAAGCTTTGTCCGGTTCGGCAAT 592
Query 3 GGACGGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCA 76
|||||||||.||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||||||
Sbjct 593 GGACGGAATTGTCACTGAGGTTGCTGTTGGTGTGAAGAGAGGATCTGACGAGCTACTCTCAGGCAGTGTTCTCA 666
Query 77 GTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAA 150
|.||.||.||||||||||||||..|||||||||||||||||||.|||||.||||||||.|||||||||||||||
Sbjct 667 GCAGCCCCAACTCTAATATGAGTGGCATGGTAGTTACAGCCAACGGTAACGATAGTAAGAAATTTAAAGGAGAA 740
Query 151 GATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGT 224
||||||||||||||.|||||.||||||||||||||.||||||||.||||||||.|||||.||.|||||.|||||
Sbjct 741 GATAAAATGGATGGGGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACCTGGTGAAGTGACTGAAACAGAAGT 814
Query 225 TATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGG 298
||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||
Sbjct 815 TATTGCTTTAGGTTTACCTTTTGGTAAGGTGACTAACATCCTTATGCTGAAAGGAAAAAACCAGGCATTTTTGG 888
Query 299 AACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAA 372
||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACTGGCAACAGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAA 962
Query 373 CCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGT 446
|||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|.|||
Sbjct 963 CCAATTTACATCCAGTACTCCAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCGCAAGTAGT 1036
Query 447 TCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGA 520
||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||.||||||||.||||
Sbjct 1037 TCTTCAAGCTGTGACAGCGGTCCAGACAGCAAATACACCTCTTAGTGGCACCACAGTCAGTGAGAGTGCGGTGA 1110
Query 521 CTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCAC 594
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||
Sbjct 1111 CTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTACCCTGTAACACTTGATGTCCTTCAC 1184
Query 595 CAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCT 668
|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||
Sbjct 1185 CAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAACAACCAGTTTCAGGCTTTGCT 1258
Query 669 CCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCT 742
|||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||.||||||||||||||.||||
Sbjct 1259 CCAGTATGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGCCCTAGATGGTCAAAATATTTATAATGCTTGCT 1332
Query 743 GTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTAT 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTAT 1406
Query 817 ACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGA 890
||||||||||||||.||||||||.||.||.||.|||||.||.||||||||.|||||||||||||||||||||||
Sbjct 1407 ACTCGACCTGATCTGCCATCTGGAGACGGCCAGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGA 1480
Query 891 GACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAG 964
|||||||||..|||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 1481 GACATCCCTACTAGCTGTTCCAGGGGCTCTCAGTCCTTTGGCTATTCCAAATGCTGCTGCAGCAGCTGCTGCCG 1554
Query 965 CTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAAT 1038
||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGCCGCTGGCCGAGTGGGCATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAAT 1628
Query 1039 GAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTT 1112
||||| |||||||||||||||||||||||.|||||||||.|
Sbjct 1629 GAAGA----------------------------------GGTGTTTATGGAGATGTGCAGCGCGTGAAGATTCT 1668
Query 1113 ATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTA 1186
.|||||||||||||||||.|||||.|||||||||||||||||.|||||.||.||.||.||||||||||||||||
Sbjct 1669 GTACAATAAGAAAGACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATCATCTTA 1742
Query 1187 ATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAG 1260
||||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct 1743 ATGGGCAGAAGATGTATGGAAAAATTATTCGTGTTACTCTCTCTAAACATCAGACTGTGCAACTACCTCGAGAG 1816
Query 1261 GGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAA 1334
|||||||||||||||||||||||||||||||||||.|||||.|||.||||.||||||||.|||||.||||||||
Sbjct 1817 GGACTTGATGATCAAGGGCTAACAAAAGATTTTGGGAATTCACCACTGCACCGTTTTAAAAAACCGGGATCCAA 1890
Query 1335 AAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGG 1408
|||.|||||.||||||||.|||||||||||.|||||||||||.|||||.|||||.||.||.|||||||||||||
Sbjct 1891 AAACTTTCAGAACATTTTCCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCCCCCTTCTGTAGCAGAAGAGG 1964
Query 1409 ATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATG 1482
||||.|||||.|||||.||.|||||.|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1965 ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCATTTAAGTTTTTTCA---AGATCACAAAATG 2035
Query 1483 GCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGA 1556
||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2036 GCTCTTCTTCAGATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTTGGAGA 2109
Query 1557 AAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAATT---------------------------------- 1596
|||||||||||||||||||||||||||.|||||||||||.
Sbjct 2110 AAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAATCTAAGCACGGGAGATGAAGATGGCGGGCAGATCCC 2183
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2184 ATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTTTTTTCATGCTGTTATCA 2257
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2258 TTCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGCTAACTGCTGTGTTTCATCTGTTCAATAGG 2331
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2332 GAAGCCATTTTTGTCTGTTTAAATTTTTAGTTTAATTTTGCTTTTTTTTTTTTTTCCAACTTAGTTGACATACG 2405
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2406 TGCCTTACAAAGGAAAACTAGTGTTGCTATTCTGCATTTACTAGGAAAAAGGAATTGGTTGTTTAGGGCACATC 2479
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2480 GTTATGTGGGAATTAAAATATGTTTGGGCAGGGGTGTGTCAAAAGGTTAAGTTTTTATTTCTCCTGCTTGGAAC 2553
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2554 TTTCTTTGAATTATTGGCTTATCACATTTCTTTCTATTTAATCTAATAAGATACTTGATACTGAGAGTATAAAA 2627
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2628 CAGCATTTTTAGTTTTTACTATCTTAGGCTTTATTGCTTTTGAAAACATTGGCCTTTTGTATCTCACAAATCTG 2701
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2702 GTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTCTTAAGACAAGT 2775
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2776 GATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAACCTTAACCTTTTTGTACACACTCTTGTGGGAC 2849
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2850 GTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAGATGTTTTTGAAGTTG 2923
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2924 ACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGGAAAATGGTTGTGGAT 2997
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2998 TTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAAGACAAAGAAAGTGTA 3071
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3072 CTGCGAAAACTTGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTTTAT 3145
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3146 GTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAATATTTTGTATTTAGG 3219
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3220 AATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTTATTTGAACAGTTCTTGTCAATCT 3293
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3294 GAATTGTTGATTCTGTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAAGATTCATAGATTCTGT 3367
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3368 TATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTTAGAAATGTAAAATTCA 3441
Query 1597 --------------------------------------------- 1596
Sbjct 3442 GTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAA 3486
