Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_375550.2
- Aligned Length:
- 3613
- Identities:
- 1461
- Gaps:
- 2051
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTTGACCAGGGGGGTAAGCTCTTTGAGGATGAAGAATTTGTAAACGAGGTCTAGGATGCAGCTATAAAGTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTCTCTAGAGCTGAGAGGGCGAAGGGTGCCCGGGCCGGGCCTGGGATTGGTCCTTTGTGGTAATAATGCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAGGTTGGAAGGAAGAGTGGAAGCAGCCTGAGAGCAGCAGGGTTGCAGTCCGGGCTAGCCTGAGGCACACAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGCAGGCTGCAGGCTGTCCCACTCACACCGCCCACGGAAGAGAAAGAACCCAGGTCAGCCAGCCACTGCAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTCGTCTCCGAGGGCGGGAGGCAGTGCGCGCGCGGGCGGGCGGGCGGGCAAGCGGGCGGAGGCAGCCAACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGAGGCGCCCACTCCCCCGGTCCCTGTGCCCCGCCGCTCGTCTCCCGCCGCCGCCGGGCGCCCGCGCGCTCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTCTTTCCGCCGCCGCGCGCTGCCCCGTGCGCTCCGGCACCTTCGGCAATTTCCGTCGGGCCCTGGCCGCCAT 518
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 519 TTTCTCGCCGCTTGTGTGGCTCGCTGGCTGCGTGGCTCGGTTCTTGGGAGCGAAGCTTTGTCCGGTTCGGCAAT 592
Query 3 GGACGGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAACTACTCTCAGGCAGTGTTCTCA 76
|||||||||.||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||||||
Sbjct 593 GGACGGAATTGTCACTGAGGTTGCTGTTGGTGTGAAGAGAGGATCTGACGAGCTACTCTCAGGCAGTGTTCTCA 666
Query 77 GTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGATAGTAAAAAATTTAAAGGAGAA 150
|.||.||.||||||||||||||..|||||||||||||||||||.|||||.||||||||.|||||||||||||||
Sbjct 667 GCAGCCCCAACTCTAATATGAGTGGCATGGTAGTTACAGCCAACGGTAACGATAGTAAGAAATTTAAAGGAGAA 740
Query 151 GATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGGGGAAGTAACAGAAACTGAAGT 224
||||||||||||||.|||||.||||||||||||||.||||||||.||||||||.|||||.||.|||||.|||||
Sbjct 741 GATAAAATGGATGGGGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACCTGGTGAAGTGACTGAAACAGAAGT 814
Query 225 TATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAGGAAAAAATCAGGCATTTTTGG 298
||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||
Sbjct 815 TATTGCTTTAGGTTTACCTTTTGGTAAGGTGACTAACATCCTTATGCTGAAAGGAAAAAACCAGGCATTTTTGG 888
Query 299 AACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAA 372
||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACTGGCAACAGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTGACACCTCATCTTCGTAACCAA 962
Query 373 CCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCTCAGGCAGT 446
|||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|.|||
Sbjct 963 CCAATTTACATCCAGTACTCCAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCGCAAGTAGT 1036
Query 447 TCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCACAGTTAGCGAGAGTGCAGTGA 520
||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||.||||||||.||||
Sbjct 1037 TCTTCAAGCTGTGACAGCGGTCCAGACAGCAAATACACCTCTTAGTGGCACCACAGTCAGTGAGAGTGCGGTGA 1110
Query 521 CTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCTGTAACACTTGATGTTCTTCAC 594
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||
Sbjct 1111 CTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTACCCTGTAACACTTGATGTCCTTCAC 1184
Query 595 CAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAATAACCAGTTTCAAGCTTTGCT 668
|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||
Sbjct 1185 CAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAACAACCAGTTTCAGGCTTTGCT 1258
Query 669 CCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTCAGAATATTTATAATGCCTGCT 742
|||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||.||||||||||||||.||||
Sbjct 1259 CCAGTATGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGCCCTAGATGGTCAAAATATTTATAATGCTTGCT 1332
Query 743 GTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTAT 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAACAATGATAAAAGTAGGGATTAT 1406
Query 817 ACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTATTGCTGCAGCATTTGCCAAGGA 890
||||||||||||||.||||||||.||.||.||.|||||.||.||||||||.|||||||||||||||||||||||
Sbjct 1407 ACTCGACCTGATCTGCCATCTGGAGACGGCCAGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGA 1480
Query 891 GACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAG 964
|||||||||..|||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 1481 GACATCCCTACTAGCTGTTCCAGGGGCTCTCAGTCCTTTGGCTATTCCAAATGCTGCTGCAGCAGCTGCTGCCG 1554
Query 965 CTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAAT 1038
||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGCCGCTGGCCGAGTGGGCATGCCTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAAT 1628
Query 1039 GAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTT 1112
||||| |||||||||||||||||||||||.|||||||||.|
Sbjct 1629 GAAGA----------------------------------GGTGTTTATGGAGATGTGCAGCGCGTGAAGATTCT 1668
Query 1113 ATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCACAACTTGCCATGAATCATCTTA 1186
.|||||||||||||||||.|||||.|||||||||||||||||.|||||.||.||.||.||||||||||||||||
Sbjct 1669 GTACAATAAGAAAGACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATCATCTTA 1742
Query 1187 ATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAGACTGTACAGCTACCTCGAGAG 1260
||||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct 1743 ATGGGCAGAAGATGTATGGAAAAATTATTCGTGTTACTCTCTCTAAACATCAGACTGTGCAACTACCTCGAGAG 1816
Query 1261 GGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAA 1334
|||||||||||||||||||||||||||||||||||.|||||.|||.||||.||||||||.|||||.||||||||
Sbjct 1817 GGACTTGATGATCAAGGGCTAACAAAAGATTTTGGGAATTCACCACTGCACCGTTTTAAAAAACCGGGATCCAA 1890
Query 1335 AAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGG 1408
|||.|||||.||||||||.|||||||||||.|||||||||||.|||||.|||||.||.||.|||||||||||||
Sbjct 1891 AAACTTTCAGAACATTTTCCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCCCCCTTCTGTAGCAGAAGAGG 1964
Query 1409 ATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATG 1482
||||.|||||.|||||.||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1965 ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATG 2038
Query 1483 GCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCTTCATAATTATAACCTTGGAGA 1556
||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2039 GCTCTTCTTCAGATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTTGGAGA 2112
Query 1557 AAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAATT---------------------------------- 1596
|||||||||||||||||||||||||||.|||||||||||.
Sbjct 2113 AAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAATCTAAGCACGGGAGATGAAGATGGCGGGCAGATCCC 2186
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2187 ATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTTTTTTCATGCTGTTATCA 2260
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2261 TTCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGCTAACTGCTGTGTTTCATCTGTTCAATAGG 2334
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2335 GAAGCCATTTTTGTCTGTTTAAATTTTTAGTTTAATTTTGCTTTTTTTTTTTTTTCCAACTTAGTTGACATACG 2408
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2409 TGCCTTACAAAGGAAAACTAGTGTTGCTATTCTGCATTTACTAGGAAAAAGGAATTGGTTGTTTAGGGCACATC 2482
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2483 GTTATGTGGGAATTAAAATATGTTTGGGCAGGGGTGTGTCAAAAGGTTAAGTTTTTATTTCTCCTGCTTGGAAC 2556
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2557 TTTCTTTGAATTATTGGCTTATCACATTTCTTTCTATTTAATCTAATAAGATACTTGATACTGAGAGTATAAAA 2630
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2631 CAGCATTTTTAGTTTTTACTATCTTAGGCTTTATTGCTTTTGAAAACATTGGCCTTTTGTATCTCACAAATCTG 2704
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2705 GTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTCTTAAGACAAGT 2778
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2779 GATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAACCTTAACCTTTTTGTACACACTCTTGTGGGAC 2852
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2853 GTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAGATGTTTTTGAAGTTG 2926
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2927 ACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGGAAAATGGTTGTGGAT 3000
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3001 TTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAAGACAAAGAAAGTGTA 3074
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3075 CTGCGAAAACTTGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTTTAT 3148
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3149 GTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAATATTTTGTATTTAGG 3222
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3223 AATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTTATTTGAACAGTTCTTGTCAATCT 3296
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3297 GAATTGTTGATTCTGTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAAGATTCATAGATTCTGT 3370
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3371 TATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTTAGAAATGTAAAATTCA 3444
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3445 GTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTGGGAGGTTTGATGGTTGTTTAATTTC 3518
Query 1597 ------------------------------------------------------------- 1596
Sbjct 3519 ACTTTGTGTGTACTCTGCTTACCTCTGTAGCATGCTCAATAAACACTTCTGTAGCTCTGTA 3579
