Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_946720.2
- Aligned Length:
- 3183
- Identities:
- 1558
- Gaps:
- 1624
Alignment
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 1 CTCGCCGCTTGTGTGGCTCGCTGGCTGCGTGGCTCGGTTCTTGTGAGCGAAGCTTTGTCCGGTTCGGCAATGGA 74
Query 6 CG------------------------GAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 55
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGTATGTAATCGGGCCGGCGAGAAGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 148
Query 56 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 222
Query 130 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 296
Query 204 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 370
Query 278 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 444
Query 352 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 518
Query 426 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 592
Query 500 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 666
Query 574 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 740
Query 648 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 814
Query 722 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 888
Query 796 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 962
Query 870 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTT---------------AGCTGTTCCAGGAGCTCTGAGTCCTT 928
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 963 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGGGCTTCCTGTTGCAGCTGTTCCAGGAGCTCTGAGTCCTT 1036
Query 929 TGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCT 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCT 1110
Query 1003 GGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTT 1076
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGA--------------------------------- 1151
Query 1077 CGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTG 1150
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 -GGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTG 1224
Query 1151 ATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACT 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 ATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACT 1298
Query 1225 CTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAA 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 CTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAA 1372
Query 1299 TTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTC 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTC 1446
Query 1373 ACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTG 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 ACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTG 1520
Query 1447 AAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCA 1520
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 AAAGCATTTAAGTTTTTTCA---AGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCA 1591
Query 1521 GGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAA 1594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1592 GGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAA 1665
Query 1595 TT------------------------------------------------------------------------ 1596
||
Sbjct 1666 TTTAAAAATGGGAAGATGAAGATTGGGGGTGAATCACATTGTTCAATGTCATCACCTATTTGACTGTTCAGAAA 1739
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1740 AGTGGGGACCAGAGTTTGATTTTTTTTGTTTTTGTTTTTTTGGGGTTTCTTTTTTTTTTCCATGCTGTTATCAT 1813
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1814 TCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGTTAACTGCTATATTTCATCTGTTCTATAGGG 1887
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1888 AAGCCATTTTGTCTGTTTAAAATTTCAGTTTAATTTTGCTTTTTTTTTTTTTTTTTTTTTCCTTTCAACTTAGT 1961
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1962 TGACATACGTGCCTTAAAAAGGAAAACTAGTGTTGCTATTGTGCATTTACTAGAAAAAAGGAATTGGTTGTTTA 2035
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2036 GGGCACACTGTTATATGGGAATTAAAATATGTTTAGGCAGGGGTGTGTAAAAAGGTTAAGTTTTTGTTTCTCCT 2109
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2110 GCTTGGAACTTATTTTGAATTACTGGCTTGTCACCTTTTTTTCTATTTAATCAAATAAGATACATGATATTGAA 2183
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2184 AGAATAAAGCAGCATTTTTAGTTTTTACTACCTTAGGCTTTATTGCTTTGAAAACAACATTGGCCTTTTGTATC 2257
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2258 TCACAATTCTGGTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTC 2331
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2332 TTAAGACAACAAAGTGATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAATCTTAACCTTTTCGTAC 2405
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2406 ACACTCTTGTGGGACGTATCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAG 2479
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2480 ATGTTTTTGAAGTTGACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGG 2553
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2554 AATATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAA 2627
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2628 GATAAAGAAAGTGTACTGCGAAAATATGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGT 2701
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2702 GGGACCAAAGTTTATGTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAA 2775
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2776 TATTTTGTATTTAGGAATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTAATTTGAAC 2849
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2850 AGTTCTTGTCAATCCGAATTGTTGATTCTGTTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAA 2923
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2924 GATTCATAGATTCTGTTATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTT 2997
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2998 AGAAATGTAAAATTCAGTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTGGGAGGTTTG 3071
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3072 ATGGTTGTTTAATTTCATTTTGTGTGTACTCTGCTTACCCCTGTAGCATGCTCAATAAACACTTCTGTAGCTCT 3145
Query 1597 - 1596
Sbjct 3146 A 3146
