Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_946723.3
- Aligned Length:
- 3168
- Identities:
- 1561
- Gaps:
- 1606
Alignment
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 1 CTCGCCGCTTGTGTGGCTCGCTGGCTGCGTGGCTCGGTTCTTGTGAGCGAAGCTTTGTCCGGTTCGGCAATGGA 74
Query 6 CG------------------------GAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 55
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGTATGTAATCGGGCCGGCGAGAAGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 148
Query 56 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 222
Query 130 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 296
Query 204 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 370
Query 278 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 444
Query 352 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 518
Query 426 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 592
Query 500 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 666
Query 574 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 740
Query 648 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 814
Query 722 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 888
Query 796 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 962
Query 870 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATG 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGCTGTTCCAGGAGCTCTGAGTCCTTTGGCCATTCCAAATG 1036
Query 944 CTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTC 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCTGGTGGCAATACAGTC 1110
Query 1018 CTGTTGGTTAGCAATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTTCGGTGTTTATGGAGA 1091
|||||||||||||||||||||||||| ||||||||||||||
Sbjct 1111 CTGTTGGTTAGCAATTTAAATGAAGA----------------------------------GGTGTTTATGGAGA 1150
Query 1092 TGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCAC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 TGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTGATGGAAACCAATCAC 1224
Query 1166 AACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAG 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 AACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACTCTGTCTAAACATCAG 1298
Query 1240 ACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCG 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 ACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAATTCCCCATTGCATCG 1372
Query 1314 TTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCC 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTCACCTATCTAATATCC 1446
Query 1388 CTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTT 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 CTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTGAAAGCATTTAAGTTT 1520
Query 1462 TTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCT 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 TTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCAGGCCTTGATTGATCT 1594
Query 1536 TCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAATT------------- 1596
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1595 TCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAATTTAAAAATGGGAAG 1668
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1669 ATGAAGATTGGGGGTGAATCACATTGTTCAATGTCATCACCTATTTGACTGTTCAGAAAAGTGGGGACCAGAGT 1742
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1743 TTGATTTTTTTTGTTTTTGTTTTTTTGGGGTTTCTTTTTTTTTTCCATGCTGTTATCATTCCTTGGTTATAAAA 1816
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1817 TGAAATGGCATATGTAAAGGCAGAGTTGTTAACTGCTATATTTCATCTGTTCTATAGGGAAGCCATTTTGTCTG 1890
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1891 TTTAAAATTTCAGTTTAATTTTGCTTTTTTTTTTTTTTTTTTTTTCCTTTCAACTTAGTTGACATACGTGCCTT 1964
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1965 AAAAAGGAAAACTAGTGTTGCTATTGTGCATTTACTAGAAAAAAGGAATTGGTTGTTTAGGGCACACTGTTATA 2038
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2039 TGGGAATTAAAATATGTTTAGGCAGGGGTGTGTAAAAAGGTTAAGTTTTTGTTTCTCCTGCTTGGAACTTATTT 2112
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2113 TGAATTACTGGCTTGTCACCTTTTTTTCTATTTAATCAAATAAGATACATGATATTGAAAGAATAAAGCAGCAT 2186
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2187 TTTTAGTTTTTACTACCTTAGGCTTTATTGCTTTGAAAACAACATTGGCCTTTTGTATCTCACAATTCTGGTCT 2260
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2261 AGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTCTTAAGACAACAAAGT 2334
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2335 GATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAATCTTAACCTTTTCGTACACACTCTTGTGGGAC 2408
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2409 GTATCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAGATGTTTTTGAAGTTG 2482
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2483 ACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGGAATATGGTTGTGGAT 2556
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2557 TTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAAGATAAAGAAAGTGTA 2630
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2631 CTGCGAAAATATGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTTTAT 2704
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2705 GTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAATATTTTGTATTTAGG 2778
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2779 AATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTAATTTGAACAGTTCTTGTCAATCC 2852
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2853 GAATTGTTGATTCTGTTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAAGATTCATAGATTCTG 2926
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2927 TTATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTTAGAAATGTAAAATTC 3000
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3001 AGTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTGGGAGGTTTGATGGTTGTTTAATTT 3074
Query 1597 ------------------------------------------------------------ 1596
Sbjct 3075 CATTTTGTGTGTACTCTGCTTACCCCTGTAGCATGCTCAATAAACACTTCTGTAGCTCTA 3134
