Nucleotide Global Alignment

Description

Query:
TRCN0000473658
Subject:
NM_001161850.2
Aligned Length:
1350
Identities:
1132
Gaps:
72

Alignment

Query    1  ATGACGGTGAAAACTGAGGCTGCTAAGGGCACCCTCACT-------------------TACTCCAGG-------  48
            |||  ||.||     ||.||     |||||.|.||..||                   |.|||| ||       
Sbjct    1  ATG--GGCGA-----GATGC-----AGGGCGCGCTGGCTCGGGCTCGGCTCGAGTCCCTGCTCC-GGCCCCGCC  61

Query   49  ---ATGAG-GGGCATGGTGGC----AA-----------------TTCTCA------TCGCTTTCATGAAGCAGA  91
               |..|| ||||  ||.|||    ||                 |.||.|      |.|||||.|||||.||||
Sbjct   62  ACAAAAAGCGGGC--GGAGGCTCAGAAAAGGAGCGAGTCCGTCCTGCTGAGCGGACTGGCTTTTATGAAACAGA  133

Query   92  GGAGGATGGGTCTGAACGACTTTATTCAGAAGATTGCCAATAACTCCTATGCATGCAAACACCCTGAAGTTCAG  165
            |.||||||||.||||||||.|||||||||||||||||||..|||.|||||||||||||||||.|||||||||||
Sbjct  134  GAAGGATGGGCCTGAACGATTTTATTCAGAAGATTGCCAGCAACACCTATGCATGCAAACACGCTGAAGTTCAG  207

Query  166  TCCATCTTGAAGATCTCCCAACCTCAGGAGCCTGAGCTTATGAATGCCAACCCTTCTCCTCCACCAAGTCCTTC  239
            |||||.|||||.||.|||||.|||||||||||.|||||||||||.||.|||||.||||||||.||||||||.||
Sbjct  208  TCCATTTTGAAAATGTCCCATCCTCAGGAGCCGGAGCTTATGAACGCTAACCCCTCTCCTCCGCCAAGTCCCTC  281

Query  240  TCAGCAAATCAACCTTGGCCCGTCGTCCAATCCTCATGCTAAACCATCTGACTTTCACTTCTTGAAAGTGATCG  313
            |||.|||||||||||.||.|||||.|||||.|||||.||.|||||.||.|||||||||||||||||||||||||
Sbjct  282  TCAACAAATCAACCTGGGTCCGTCCTCCAACCCTCACGCCAAACCCTCCGACTTTCACTTCTTGAAAGTGATCG  355

Query  314  GAAAGGGCAGTTTTGGAAAGGTTCTTCTAGCAAGACACAAGGCAGAAGAAGTGTTCTATGCAGTCAAAGTTTTA  387
            ||||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||||||
Sbjct  356  GAAAGGGCAGTTTTGGAAAGGTTCTTCTGGCTAGGCACAAGGCAGAAGAAGTATTCTATGCAGTCAAAGTTTTA  429

Query  388  CAGAAGAAAGCAATCCTGAAAAAGAAAGAGGAGAAGCATATTATGTCGGAGCGGAATGTTCTGTTGAAGAATGT  461
            |||||||||||.||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  430  CAGAAGAAAGCCATCCTGAAGAAGAAAGAGGAGAAGCATATTATGTCAGAGCGGAATGTTCTGTTGAAGAATGT  503

Query  462  GAAGCACCCTTTCCTGGTGGGCCTTCACTTCTCTTTCCAGACTGCTGACAAATTGTACTTTGTCCTAGACTACA  535
            |||||||||||||||||||||||||||||||||.||||||||.||||||||..|.|||||||||||.|||||||
Sbjct  504  GAAGCACCCTTTCCTGGTGGGCCTTCACTTCTCATTCCAGACCGCTGACAAGCTCTACTTTGTCCTGGACTACA  577

Query  536  TTAATGGTGGAGAGTTGTTCTACCATCTCCAGAGGGAACGCTGCTTCCTGGAACCACGGGCTCGTTTCTATGCT  609
            ||||||||||||||.||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||.
Sbjct  578  TTAATGGTGGAGAGCTGTTCTACCATCTCCAGAGGGAGCGCTGCTTCCTGGAACCACGGGCTCGATTCTACGCA  651

Query  610  GCTGAAATAGCCAGTGCCTTGGGCTACCTGCATTCACTGAACATCGTTTATAGAGACTTAAAACCAGAGAATAT  683
            ||||||||||||||||||.|||||||.|||||.||.||.||||||||||||||||||||||||||.||||||||
Sbjct  652  GCTGAAATAGCCAGTGCCCTGGGCTATCTGCACTCCCTAAACATCGTTTATAGAGACTTAAAACCTGAGAATAT  725

Query  684  TTTGCTAGATTCACAGGGACACATTGTCCTTACTGACTTCGGACTCTGCAAGGAGAACATTGAACACAACAGCA  757
            |.|.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||.|||||.|||||.||.|||.|.|
Sbjct  726  TCTCCTAGACTCCCAGGGGCACATCGTCCTCACTGACTTTGGGCTCTGCAAAGAGAATATTGAGCATAACGGGA  799

Query  758  CAACATCCACCTTCTGTGGCACGCCGGAGTATCTCGCACCTGAGGTGCTTCATAAGCAGCCTTATGACAGGACT  831
            |||||||.|||||||||||||||||.||||||||.||.||||||||.||.|||||||||||.||||||.||||.
Sbjct  800  CAACATCTACCTTCTGTGGCACGCCTGAGTATCTGGCTCCTGAGGTCCTCCATAAGCAGCCGTATGACCGGACG  873

Query  832  GTGGACTGGTGGTGCCTGGGAGCTGTCTTGTATGAGATGCTGTATGGCCTGCCGCCTTTTTATAGCCGAAACAC  905
            ||||||||||||||.||.||.||||||.|||||||||||||.||.||||||||.||.|||||||||||.|||||
Sbjct  874  GTGGACTGGTGGTGTCTTGGGGCTGTCCTGTATGAGATGCTCTACGGCCTGCCCCCGTTTTATAGCCGGAACAC  947

Query  906  AGCTGAAATGTACGACAACATTCTGAACAAGCCTCTCCAGCTGAAACCAAATATTACAAATTCCGCAAGACACC  979
            .|||||.|||||||||||.|||||||||||||||||||||.|||||||||||||||||||.||.|||||.||||
Sbjct  948  GGCTGAGATGTACGACAATATTCTGAACAAGCCTCTCCAGTTGAAACCAAATATTACAAACTCGGCAAGGCACC  1021

Query  980  TCCTGGAGGGCCTCCTGCAGAAGGACAGGACAAAGCGGCTCGGGGCCAAGGATGACTTCATGGAGATTAAGAGT  1053
            |||||||.||||||||||||||||||.||||.|||.||||.||.||||||||||||||.|||||||||||||||
Sbjct 1022  TCCTGGAAGGCCTCCTGCAGAAGGACCGGACCAAGAGGCTGGGTGCCAAGGATGACTTTATGGAGATTAAGAGT  1095

Query 1054  CATGTCTTCTTCTCCTTAATTAACTGGGATGATCTCATTAATAAGAAGATTACTCCCCCTTTTAACCCAAATGT  1127
            |||.|.||||||||.|||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||
Sbjct 1096  CATATTTTCTTCTCTTTAATTAACTGGGATGATCTCATCAATAAGAAGATTACACCCCCATTTAACCCAAATGT  1169

Query 1128  GAGTGGGCCCAACGACCTACGGCACTTTGACCCCGAGTTTACCGAAGAGCCTGTCCCCAACTCCATTGGCAAGT  1201
            |||||||||||..|||||.||||||||.||.||||||||||||||.|||||.|||||||.||||||.||||.||
Sbjct 1170  GAGTGGGCCCAGTGACCTTCGGCACTTCGATCCCGAGTTTACCGAGGAGCCGGTCCCCAGCTCCATCGGCAGGT  1243

Query 1202  CCCCTGACAGCGTCCTCGTCACAGCCAGCGTCAAGGAAGCTGCCGAGGCTTTCCTAGGCTTTTCCTATGCGCCT  1275
            |||||||||||.||||.|||||.|||||.||.||||||||.||.||.||.|||||.|||||.||||||||.|||
Sbjct 1244  CCCCTGACAGCATCCTTGTCACGGCCAGTGTGAAGGAAGCAGCAGAAGCCTTCCTCGGCTTCTCCTATGCACCT  1317

Query 1276  CCCACGGACTCTTTACTC  1293
            ||...|||.||.||.|||
Sbjct 1318  CCTGTGGATTCCTTCCTC  1335

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