Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_049794.1
- Aligned Length:
- 4391
- Identities:
- 161
- Gaps:
- 4208
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCAACTCCATCTGTCACAAAAATTAAGGCTAAATCTCCTCTCCAGAAGCAGAGGGAGCCGGGGCTCCGACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCAGCGTCGGGCTGTCTGCCTCTCCCTAGAGGCCAAGTGAATTTGAAATGGCAAAAGTCACAGCCGGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGCACTAGGAGATTCCTCCGGCTGCGGGAAATCTTCCTGTACCTGCTGAAGCTGCTGCGTTCCTCAGAGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGGTCTGCCGTGGGAAGCTGCACCTCTGCAGTCCCCAAAACCAAAATCAAACCTTAAAAGAGCCAGACTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCCAGTCACCACGTAAGACATCTGGACCACCTTCAGACTCGCATGCTGTGAGGAAGCCCATGCTTACTATGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTAGAGGATACATGGAGAAGGAAAGAGATGCCTGGCCAGCTCCCTGCTGTTTCAGCCATGCAGAGGTGCTGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTAATTGGAGGGGATAGTATGAGCCTCCAAAGATTAGGGAAGAAAATTGCAGTTGAAGAAAACTTGCTTTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCAATGCAAAAATAATGGGATGAATGGCATGCTGAAATATCATATGACTTACGAAAATGATGAATGGTTTATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATCTACATATGTGGAACCCATGAATGGGAGTCGGAGAAGGGGGCAACTGTATACGCAAAAAGCTATCATAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCCAAAATAGTGATAACAATGTTGAAACACTACTGGGATTACTACTGTTAATGACTACCAGTGATCAAGCACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCCTGCCCCAGTGTTTGCCTGCCTTGTTTGAAGACACGAAAAAATGTACACAAAATGATTTAGAACTGTTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTTTTCAGAAAATAATTTAAAATCATCTACCTCATAACTAAAGGACACTGAATTGGAGCCAGCTGATGTAAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCTTACCTTGGTTGCCACCTTCTGGTCTCTGTTTGAGGAACAACTGCATGTGATTAAGGATGAAGAAACTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCCCAAGAATTTAAGTAATTTGTTCAAGGCAACACACTGCTATGTGGTAGAACTACAAATTGAGCCCAAATAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCAGCTTCAGATACTATGCAAAGGTATCCTAGGTGTGGGGGTGATAACCTGGTGACAATCCCTTCTCAGAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAACAGGTCCCATCTACAGAGGTGAAGCAGAGTGTGGAACTGAAAAACTCAATGGAAGAATGGCTATTAAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTAGGACGGCTGGGAAATAATAAAGTAATAATAATAATACTAGGTATTGACGTGTGCTACATGCCAGGCCTTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGACATTTGGATTGATTCCCATTTTCTTTACTTTTCAGCAGTGGGGTCTTTCACCTTTCAAGCTCTGCCTGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGTCAACATGGTGGCATTTGGCTAGGTTCTTTTAGGCAACCAATTGTTTTAACATGATTTGTTGAAAAGCCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCTCTCTTTCATTGAACTATAATGCTAGCTCTGTCATAAATCAAATTTTCATTTGATTTATGATATGAAAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATATGCATTTGATTGATATGCATTTTTTCTCCAATGATACTCAACTGTCTTAATTATATAATTTTGTAGTAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGGTATCTAATTAGGCAAATACCCACTCCCAACCCTGTTTCTTTTGTTTTTAAATCCAGGGGTGTTTTGGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTCTCGTTCATTTGTGCTTCCACCTACATTTTTCAGTTAACTTGTCAGGTACGAAAAAATAAAAGGCAAAATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTTATCCTTAAATCAATTTGGGCAAGTTTGCAGTTTTTTCTTGTATTGTAACTTCCAATCTATGAATATGATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATTTTTTCACCAATTTATGGCTTCTTCCAATAACATTTTATAATTGTCTTTTTAGAGGCCTTATCTTTTGTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGATTCATATCTAGGTATTTAATATTTTTGATGCTGTTATAAATGGTATTTTTAAAAATATATACATTTTTAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TATTTCACATAGAAAACTTTAATGGATTTTTAAAATGTAGATTTGTATTCAGTAAACCTGTTAAAATCTCTTAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATGTCTAAGAGTTTATTTATTCAATTTGATTTTCTTTTTTTTTTTTTCTCCTGGAGACGGAGTTTCGCTCTTG 2072
Query 1 --------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCG 60
.|||||||||...||||||||||||||||||||||..|||||.|||||||||.||||||.
Sbjct 2073 TTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCGGCTCCCGGGTTCAAGCAATTCTCC 2146
Query 61 TGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTAC---ACTCAACTAATTTTT-GTATTTTTA 130
||.|||.||||||||||||||||||||||||||| |.||||.|| .|.||.||||||||| |||||||||
Sbjct 2147 TGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGC---TCCCACCACCATGCCCAGCTAATTTTTGGTATTTTTA 2217
Query 131 GGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------ 186
|.||||||.|.||||||||.|||||||||||||||||||.||||||||||||||.|
Sbjct 2218 GTAGAGACAGAGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGACTGCTTTGGC 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 TTCCCAAACTGCTGGCATTACAGGCGTGAGCCACTGCGCCCTGGCCTATTCTACTGGATTTTCTATGCAATTGT 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 GTTATAACTCATCATAAAGATAATTTTATTTCTTTTCCACAATCTTTACAGGTTTAATTTTTTTCTATGCCTTG 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 CTGCACTCTCTATGATTTCCAGTATTGGCACTACTCTGGCCTTTGGTCTTTGCTCTTGCATCAGCCTTTCATAA 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 TTGGGTATGTTTGTTGTAAGTTTTCTGTAGAGAGTCTTTATGAGGTTAAGAGATTTGTTTCATTTCTAGTTTAT 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 TAAGAGATTTTATTATAGATCAATGTTAAATTTTATCAAAATTTCTCCATTGCATTTCTATTGAGATGATCACA 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 TGATTATTAAAAATTAGTATAAAGATTTATTATTTTGATATTTTAAAATCAGGTTTATTGAGGCATAATTTATA 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 TATAATAAAATTTACCCTATTAGAGTATCCAGTCCAGTAAGTTTTGGTAAATGTATGCGAATAACACAATAAAC 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 AGGTTTAGAACTTTTCCATCACCACAAAAAGTTTATCAGGCCCCTTTGCAGTTAATACTCACCTTCTCTCCAGC 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 CCCAGTAAACCATGGATCTGCTTTTTGTTACTGTAGTTTTTCCTTTACTTTGATTTTTTTGAGTGTTAAGCCAG 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 CCTTACATTTCTGAGTTAACTTGGTCATGATATCTTCTACAAACATTAATGAATTTAGTATGATTGGCTGATGC 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 CTTTGCTTTCCTATACTGTCCTTGCCTGGTTGGTACAAGGATTATATAATACTTATAAAGTGAGTTGAAGACAG 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 TTTCCTCTTTTCACCAGCTGGAATAATTTATGTATTATTGAAATTAATTGCTCCTTAAATACTTGGCAGAATTC 3179
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3180 ACTACAAAGGCACTTAATTCTAGACCTTTTGGAGGAAGATAAAATACTGATTTTTTAAATCATTATTTTATTTT 3253
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3254 TGTAATACAGCTTATTTTTCCAGAAACTTCTACTTTTCGTTTACATCTTCAAGTCAGATTAAAGTTGTATTAAT 3327
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3328 AACCCCTTATTATTTAAATCTCAGCAGAATGTGAAGTTATGTTCCCCCTTTGTATCCATTTTTTTCTCTAGATA 3401
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3402 TTTTTCTGTTACCTGTTTTAAATTTAATTCCATTGTGGTCAGAGATAATACTTTGTATGACTTGCATTCTTTTA 3475
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3476 TGTATATTGAGACTTGTTATAAGGCACAGAGTATGGTTTATCTTGGTAATCATTCGTGGCACACTTAAAAATCA 3549
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3550 TGTGTTTTCTGCTATTGTTGAGTGGGATGTTCTGTAACTGTGAATTAGGTCAAGTTAGTTGACAGTGTTGTTCA 3623
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3624 AGTCTTTTATATTATTACTGACTTTCTTTCTACTCACTCTATCAATTAGTGAAAGGTGTCAATATTTCCAGTTA 3697
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3698 TAATCATGGATTTGTCTATTATTACTTTCAGTTAGAAATTTCTAGCTGAAATTATCTATTTCTACTTTCAGTTA 3771
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3772 GTGTTAGCTTGCTATATCTTTTTTCCATCCTTCTTCTTTTAACCCAATGTATCTTTATATTGACATTACATATA 3845
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3846 TGATTTATATTATATTATGTTACTATATCTTGTATGCAGCATATATTTGGATCTTTTTTATCCAATCTGATGAT 3919
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3920 CTTTGCTTTTTAATTAATGTATTTAGATCATTTACATTTACTGTGATTATTAATATGTATTAAGTTCAAATCTA 3993
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3994 CCACTTTGGTATTGAATATCTAATTGTCCCATTTGTTCTTTGTTTCAAAAAAACTCTTTTTTTGCCTTTTTTTA 4067
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4068 TATCAAGTATTTTAAAATTCTATTTCATCTTCTTTGTTTGCTTATTAGCTATAACTTTATTTTGCTAATTTAGT 4141
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4142 GGTTGCTTTAGGGTTTATAGTAAACATCTTCAACTTATCACATTCTATGTTCTAGTCATATTATATTATTTAAC 4215
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4216 ACATAGTATAAAAACTTTATTGTAGTATACTTTCATTTTCCTCCAGTAATTGTGCGATTCTTGTCATCTATTTT 4289
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4290 GCTTCTACATGTTATAAACTCTACATGATTTTGTAATATTTTTGTTTAAACAATATTTATTTAGACTTAATAAT 4363
Query 187 ------------------------- 186
Sbjct 4364 AAATAATAAAAATATATGCTAACCA 4388
