Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_073443.1
- Aligned Length:
- 6562
- Identities:
- 162
- Gaps:
- 6376
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTCCCGGCCCGGCACAGTTAGAACGAGACCCTCTTCCTGGCGCAGCCCCCGCGGTTCCTGCGGGCGGGAATCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGGCCCGCCCGTCTTGTCTCCTGCCTCTCCCCCTTCGGCCGTGCAGTCCGCAGCCTCGAAGGTGGCCGCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGGACGGCGCCGGCCTACCCCGCCTTGGTGGTGGCGGCGGCGAAGGGGGCGGCCCATTCTCTCCCTTCTCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCACCATTCGTGGCAACGCAGGTGATATTGGAAATTATTATTATGGACAGGGTCATCCCATGAAGCCTCATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAATCCGCATGACCCATAACTTGCTGTTAAATTATGGCTTATACAGAAAAATGGAAATATATAGGCCCCATAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCACTGCCGAAGAAATGACAAAATATCACAGTGATGAGTATATCAAATTTCTACGGTCAATAAGACCAGATAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGAGAAGATTGTCCAGTGTTTGATGGACTCTTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTTTTGTCAGCTCTCAACTGGCGGTTCAGTTGCTGGAGCTGTGAAGTTAAACCGACAACAGACTGATATGGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTAATTGGGCTGGAGGATTACATCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTACGTTAATGATATTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTTGCCATCCTTGAATTACTAAAGTATCATCAGAGAGTCTTATATATTGATATAGATATTCATCATGGTGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGTTGAAGAAGCTTTTTATACAACAGATCGTGTAATGACGGTATCATTCCATAAATATGGGGAATACTTTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCACAGGAGACTTGAGGGATATTGGTGCTGGAAAAGGCAAATACTATGCTGTCAATTTTCCAATGAGAGATGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATAGATGATGAGTCATATGGGCAGATATTTAAGCCTATTATCTCAAAGGTGATGGAGATGTATCAACCTAGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGTGGTATTACAGTGTGGTGCAGACTCATTATCTGGTGATAGACTGGGTTGTTTCAATCTAACAGTCAAAGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGCTAAATGTGTAGAAGTTGTAAAAACTTTTAACTTACCATTACTGATGCTTGGAGGAGGTGGCTACACAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCGTAATGTTGCTCGATGTTGGACATATGAGACTGCAGTTGCCCTTGATTGTGAGATTCCCAATGAGTTGCCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATAATGATTACTTTGAGTATTTTGGACCAGACTTCAAACTGCATATTAGTCCTTCAAACATGACAAACCAGAAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTCCAGAATATATGGAAAAGATAAAACAGCGTTTGTTTGAAAATTTGCGCATGTTACCTCATGCACCTGGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAGATGCAAGCTATTCCAGAAGATGCTGTTCATGAAGACAGTGGAGATGAAGATGGAGAAGATCCAGACAAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAATTTCTATTCGAGCATCAGACAAGCGGATAGCTTGTGATGAAGAATTCTCAGATTCTGAGGATGAAGGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAGGTCGAAGAAATGTGGCTGATCATAAGAAAGGAGCAAAGAAAGCTAGAATTGAAGAAGATAAGAAAGAAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGGACAAAAAAACAGACGTTAAGGAAGAAGATAAATCCAAGGACAACAGTGGTGAAAAAACAGATACCAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACCAAATCAGAACAGCTCAGCAACCCCTGAATTTGACAGTCTCACCAATTTCAGAAAATCATTAAAAAGAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATTGAAAGGAAAATGTTTTCTTTTTGAAGACTTCTGGCTTCATTTTATACTACTTTGGCATGGACTGTATTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTTTCAAATGGCTTTTTCGTTTTTGTTTTTCTTGGCAAGTTTTATTGTGAGTTTTTCTAATTATGAAGCAAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTCTTTTCTCCACCATGCTTTATGTGATAGTATTTAAAATTGATGTGAGTTATTATGTCAAAAAAACTGATCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTAAAGAAGTAATTGGCCTTTCTGAGCTGATTTTTCCATCTTTTGTAATTATCTTTATTAAAAAATTGTACTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGATTATCTTTTGTCTGTTTATTACTACAATATGAAGTCTTGTTTCAGTGGCTAATGACATCATTTCTGTAGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTACAATACACTCTAGGTGAAAGATAATGATTACAGCTTGAAAGATAACTATTTGCTGTTTCTTTGGGAAGAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTTATAGTAATTATTACTTATCTTTGCAATAGAAATTCTACCACCTTGCCCTCTATAGCTTAGCCAGTTAGTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCAGTGAAGATTAACATCCCATTACAATTTATGAAATAATACAGACTCTGCAATTGAGATGTAGGAGTTCTTTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGTTGACCCAAAGATTCTCAAAATTGAAATGGAAATTCTGAATTGAAAGAAGAAACTGACCAGAACTTGTATTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCAGACTTGCCTATAGTATATTGCTGGTTTAAAATGGAACCTGCAGACAAAACCTGTTTCTTTTACTGCATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACATGGCATCCAGGTTCCATTATTATTTACGTGACATCCAGGTTTCTAACTCAAGGAAATAAACACAACTGATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TATCATTCAGCAACTACTTATTGTGTGTCTGCCCATTTTAAGACTGTAGGAGTGTAACTGAATATAATGGAAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGCTTTCACTCAGAGCTTACACTCAGAGCTTACATTCTAGTAGCAGGAAGCAGACAAATGGGGGTAACTCCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTACTAAGATGTGCAAAGAAGACAAAACATTTTAGGAACTTGCCAAAATCAGTGAAATCTCCCTTTTTGTCAGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCACATTGATTCTTTTGAGATTAAAAATTACAGAATGCCAGAAGATAATTCAGTCAAAAGTATTTCTCTTCAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCAGTAAAATATTAAAAGAAAAAATATTTCTCTACAAGCCTCTTAAATGTTTCAGACATTCACAATAGCACCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGACTTTTGTAATGAACAGCTGTGCACCCACCCCGACTTAACAAATATTTTACTTTTGCTATATTTGCTTCGGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTTTTTTTCTTAAAATACACCGAAATTGAAGCTCTCTTTGTGTACTTTGTCGTTTGTAATCCTCCCTCCCTCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGCCTTAAGAAGTAATCACCATTGTGATTATTTTATCCATGTTTTTGTGAATATTTTACCCATGTTTTTGTACT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTGCTACATATTTGTTATCAATCTGTAAACCTTTATGACATTAGGAACTAAGAAACTTAGTCCCTTCGTTAGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGGATAATGAAATGTATTTAGTGTTTGTGAAACATAGATGGTATGTATTTGGACAATTCTGTAACTTTGCTTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTTATTTTTATTTTTCCATAGCTTATTGGGGAACAGGTGGTGTTTGGTTACATGATTAAGTTCTTTAGTGGTGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTGTGGGATTTTGGTGGACCCATCACCCAAGCAGTGTACACTGCACCCTATTTGTAATCTTTTATCCCTCGCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCCCTCCCACCATGCCTCCCGTCTACCATGATGATCCTGTTTTAAATAAGAAAATACCATTTCGCAGGCTCCAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATGTTCTGGCATCCTCCCTGTGGATTTCCCAGTGCCTGCAGCTCACAGGACAACAGGGGCTGTGGTAGAGTCAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTATGAGATCCTGGAGTAGTGGATGGAGGAGATGGAACAGTGAAGACGGAAACTGAGCTCAGTATCCGGGTGCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGGAGACAAAGGCCCTTTGCTTTTTTTCATTTAATATTCTGATCTACCCCTGTTGACACATGTTAAGTATAGTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CATTTTGACTGCTATGTATTATGTTCCATTGTGTGAACATACTGAAATTGTACACTTCAATACTATACTGGATC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TCCTTGGGTGTATTTAAGAGGTTTTGTTTTTCTAAGTAGTTGGTTATATACAACTAAAACCTCAAGAGAACTAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTAAAGCAATTTCAGCAAGGTGATTTGGTACAGCATTAATAAACAGAAATCAGTAACACTTAGTGACCAAGTCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GTTGGAAGAACAAAGACCCCCATTTGTAATAACAAAATTTTTAGAAATAATATGTAAAGAAGCTATGGTTCTTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGTCTAGTAAGGTCAATGTAACATAGTAAGATGTCAGAATACCCTAATACTTTAAAAAATTCATATAGGATAAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AATGATATTTGAAATTGGCAAGGAAAGACATTATTTTGTAAGTGGAATTGGGACAACAACTGGTAACCAAATGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AAAACCCAGTTTTCTGCCCTCCACTAGAAGATTTAAATAGGAAAAGATAAAACTACCAAAAACCTAAACTCTTA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGCAAATGGATTGAAGAAGGCCTAAGTGTGACACCAAACTCAACTATAAAAGATATATTTGATAACAAAAAAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAATTAGTTCAGTGGACCAACAAAAACTTAGAAGACAAGTCAAGAAAAATGACAAAAGACAGAGTGGGAGGCAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 ATTTGTAACTCATCCAGGTCAAAAGGCTCATATCTAAAGATAGTAGAGGAACAAAATGTATAAGGATGTGAACT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GGGAAACAAATACATATAAATAGTTTGTAAATATGAAAAGATCTTTAACCTCAGTAAATAAAAAGCTATAGAGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GACTTATTTTTTAACTTAGTTTTTTAAACCTATTATGTTTATTTATTTTTTCTTTTTTTGAGACGGAGTCTCGC 4588
Query 1 ----------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCT 58
.||||.||||||.|||||.||||||||||||||||..||||||||||.||||.|||||
Sbjct 4589 TGTTGCCCAGGCTGGTGTGCAATGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTGAAGCCATTCT 4662
Query 59 CGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATT-TTTGTATTTTTAG 131
|.||||||.||||||||||||||||||||||||||||..||.|||.||.|.||.|||||| ||.|.||||||||
Sbjct 4663 CCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGTCACCACGCCCAGCTAATTGTTCGCATTTTTAG 4736
Query 132 GAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------- 186
.||||||||||||||||..|||||||||||||||.||||||||||||||||||.|
Sbjct 4737 TAGAGACGGGGTTTCACTATGTTGGCCAGGCTGGCCTCGAACTCCTGACCTCATGATCCACCCACCTTGGCCTT 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 CCAAAGTGCTGGGATTACAGGTGTGAGCTGCCGCACCTGGCTGTTTATCTCTTTTTTTTAGAGAAAGGATCTCG 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 GTCACCCAGGATGGAGTGTGGTAGCCTGATCATATCTCACTACATCTTAGAACTTCTAGGCTTAGGGTATTCTC 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 CCACCTCAGCCTCCCAAGTAGCTGGGACTACAAGTGTGCACCATCACACCTAGCTGATTTTTACATTTTTATTT 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 TGGAGAGATGGTGTCTCCCTGTGTTGCCCAGGCTGGTCACAAACTCCTAGGCTCAAGCGATTCTCCTGACTCAG 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 GCATGAGCCACCGTACCCGGCCTAAACCTATCATGTTACAGACTTAGAAAGCAACTATTGTCAAGTGTTTGAGG 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 AAACTCAGGTCAGGTTTGGTAAACTAAGATATTAACTCAAGTAAAGCTCTTTAATTCATTTAATGAAGGTGCCA 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 CATTGTCTCAGTTCTCTATGGCATGGGTGAATGCTGTTCTAAGTCAGCATTGGTACTCTAAGCTAGTTACATCA 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 TATCTAAGCTTTGCCCTTCTACCAGAGCTGCTAGCATTCTGTCAATGGGCAATTATTTGAAGTTCTTACATTGA 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 AGTTAGTCACCTACATCTTCTGTTTTTTATGGTTTTGATGTAGTAATACTGCTGAAGTTTTTTTGATAACTGCG 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 ATTCATAATATTTGTTATTCATATTGTGATATAAATGATAAGGGCTTTTGAAAACAAGTAGTAATCATTTCAAT 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 AGCTTAGGATCTCCACCATAATCTTAGGAAAATTACTAACCTCTGTGCCTCAGTTGCTTCATCATTTAAAATGA 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 GGAAAATAATAGTCCCTACTTAATAGGTTTGTTGTGAGGATTGAGTTAATAACATAGTTAATGCTCAGTAAGGG 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 TTAGCTGCTATTTTTTTTTCTTTTTTTTTTGAAAGAGTCTCACTCTGTTGCCCAGGTTGGAGTGCAGTGGCATG 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 ATCTTGGCTCACTGCATCCTCTGCTTCCTAGGTTCAGGTGATTCTCATGCTTCAGCCTCCCAAGCAGCTGGGAG 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 TACAGGTGTGCACCACCACACCTGGCTAATTTTTGTATATTTAGTAGAGACGGGTTCTCACCATATTGTCCAGG 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 CTGGTCTTGAACTCCTTACCTCAAATGATCCACCCGCCTGGGCCTCCCAAAGTGCTGGGATTACAAGCATGAGC 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 CACCGCGCCTGGCTTGCTATTGTTATGAGGTAAAGGTAGATAGATGGGTGAGAGTGGTGCCAGGGGAAGTGTTA 6068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6069 AATTTTTGAGTGTTCCTTTAGATGCCAGATGGGTTGTATCTGAGCCTTTTATTGCAGTTTGATGCCTACTAGTG 6142
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6143 TGAAGACTACTAGGTCATAGTGGATAGAGAAGCAATCTTTTGGAGACCTGATTTTAGCAAGGATACGAATAATA 6216
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6217 TTTGACAACTTTGGGGGGATCTTGATGCCTCTGTAATTTACTCAAGGATAATCTCAAGAAAAATGGCATTAAGT 6290
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6291 AGATTACAGAAAAAATAGAACTATCATATTGTTATTATTGGCTATTTACATGAGCAATGCGGAGAAATGTTTAG 6364
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6365 GATTACAGCATTTAGAAGCTTCTCAATTGCTGCATTTCCTCACTGTACCACAAGATGGCAGATACTGCATTTAA 6438
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6439 AATTTTTTTTTCTGTGTGTTTTCTCTTATAGTCACTTGGTGGCCATGTAACAAGCAGAGCAACATGTATTAACA 6512
Query 187 -------------------------------------------------- 186
Sbjct 6513 GATTCTTTTTGAATGCAATATTGGATTAAAAACTTTGAATTAAACTACAA 6562
