Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_135911.2
- Aligned Length:
- 3802
- Identities:
- 160
- Gaps:
- 3619
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA 666
Query 1 -------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCA 49
.|||||.|||||.|||||.||.|||||||.|||||..|||||.||||||
Sbjct 667 GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA 740
Query 50 AGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTT 121
|||.||||||.||||||.|||.|||||||||||||||||||| |||||..|||| |||.|.| |||||||||
Sbjct 741 AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACA-GCGTGCACCAC--CACGCCAGGCTAATTTTT 811
Query 122 GTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------- 186
|||||.||||.|||||||||||||..||.||||||||||||||||||||||||||||||||||.|
Sbjct 812 GTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCC 885
Query 187 -------------------------------------------------------------------------- 186
Sbjct 886 CGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGA 959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 960 ATATACTAACAAACTGCAAGGTGATGCGGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTG 1033
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1034 GAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGT 1107
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1108 GCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTTCCTCTTTAGAGAGCAAAG 1181
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1182 ACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTC 1255
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1256 TGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAA 1329
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1330 ACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCC 1403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1404 TAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTC 1477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1478 TATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAA 1551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1552 GCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTC 1625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1626 ATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACT 1699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1700 ACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAA 1773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1774 GCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAA 1847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1848 TTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTG 1921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1922 CGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT 1995
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1996 AAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGAT 2069
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2070 AGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAA 2143
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2144 TGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATT 2217
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2218 CATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTT 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 CAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTC 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 TCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATC 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 ACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATA 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 ACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAG 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 CCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCT 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 CCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACT 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 CCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATA 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 TTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAA 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 TATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGT 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 AACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAG 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 GGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGC 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 TAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAAT 3179
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3180 GCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAA 3253
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3254 GCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTT 3327
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3328 GTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTG 3401
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3402 GCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACAC 3475
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3476 ACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGC 3549
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3550 AATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAA 3623
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3624 CAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGT 3697
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3698 ACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAAT 3771
Query 187 ---------------------------- 186
Sbjct 3772 TATCCATTAAACAAACAAAACTGTGCCA 3799
