Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_138028.2
- Aligned Length:
- 5951
- Identities:
- 162
- Gaps:
- 5765
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGTTAGAGCCTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAGTTGGCACTACCCGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGAGGAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAGGCTGTATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGTTTAAAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTTCAGAGTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACTGCCTAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGTGATAACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCTGTTTGCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATACACAACCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACTCCACACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACAGGGGTACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGAATTTCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGCGGGAGGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGGCCTAATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCCAGCCACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATGCATCTGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GATGTCAGATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGATAACTAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACTCAGGGCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGAACTCCACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATTCTCTTATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCTCAGGGAGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACAAGGTCGGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCAGATCATACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCACATGCAGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GATCACACCTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CATGATTTTAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CACATGATTTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTC 3774
Query 1 ---------------------------------------------------------------ATGCAGTGGCG 11
.||||||||.|
Sbjct 3775 CAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGTGCAGTGGTG 3848
Query 12 CCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGG 85
|.|||||.||||||||.|||||||..||||..||||||||||||||||.||||||..|||||||||||||||||
Sbjct 3849 CTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGG 3922
Query 86 ATTACAGGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCC 158
|||||||||....|||||.||.|.||.|||| |||||||||||||||.|||||||||||||||||.||||||||
Sbjct 3923 ATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC 3996
Query 159 AGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------------- 186
|.||||||||||||||||||||||||.|
Sbjct 3997 AAGCTGGTCTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAG 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 CCACCGTGCCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGA 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 ACAACTCTAGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGA 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 AGTCCTTTCTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTG 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 TGTACCACGATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTG 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 GGGTGACTCCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCG 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 GTATGCACACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACC 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 TTAGTGTTGTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAAC 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 TGTGATAAGCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAG 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 CACCCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGA 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 TTCCCCGTTTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGC 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 TGACCACTGCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACA 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 GCTCCAGGCCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCA 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 AGTTTAATTTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAA 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 ATTAAATAAAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACA 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 CTTGCTTTTATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAG 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 GGGCAAGAGATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAA 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 ATTTGTGTGACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCA 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 GTGATACTCTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGG 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 AAAAGTTGTCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAG 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 TATAACTCAAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTG 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 TGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCC 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 ACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGT 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 TTCTAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGT 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 TCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGAC 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 ACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGT 5920
Query 187 ------------------------------- 186
Sbjct 5921 AACAGTAATGTATAAAGTGCCGATGATGTAA 5951
