Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_002958751.1
- Aligned Length:
- 2237
- Identities:
- 161
- Gaps:
- 2055
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGGAAACAGAGCAAGATCGTATCTCAAAAAAAGAAGTACCTTCCTGAGCAGTATGAGGATTACATGAGATAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACAGAAACTGTTTTGCTTGGTGCAGAGTAAACACCAAGGGTTTCTTCCCATTAGTTTTAAAGGAGTTTTACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTCAGCATGTTAAGTGCCTTCTGCACTTCCGGCATTGGAGGAGAGAGAGTGACAAATAGAATTGTGTCCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTCTCAAAGCTTCCAAACTAGGGAGGAGAAACTAGTCTTTTAGAGTACATTTCCAGAGAGAAGGGGGTGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAATGATCTATTTCACAACAGACTAATTTTACAGGTGGGAAAACAAGCTCAGAGAGGTTCAGTGATTTGCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGGCACACAGCTAGTTTGCTAGAGGAACCTAACTGGAGTTAGAATTCTCCAGGGGAGGAGTTTCTCCAGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCTTGCCTGCCATGGTTTTCCAGATTCCAGGATCAAGGTGAGAACAGAAACGCATGAGAAGCTCAGGGAAGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCCACGTGTTTCTCAGCTCCACAGGGAAACCTTGAGCAGTGGAATTTAACCAATGGGTTTGGGTTAGGCGCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCCCTACCCTAGTCCAACCTGCAGCAAGGAAACCAAGGCTGATTCCAGCCCGGGCTTTTTTCTCCTGGGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCCTCCTTGGGTCTGGACAGGCTCGGAGGTGACCTGCCTAGAGGTGGGCGATCTAGCCGCACCTTTCTAGGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACAGAGCTTCAGTTTAACTTTGCAGGAGTTTGTTAGGAATGAACTAGACACGCACCCTCCGCCCAGCTCCGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCGCCTCCTGCAAGCCTGAACTCTTAGAATAATTAACCACTGACTGCAGGATCCTGGCCTCTGCCAGGGCCCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTACCCAACCTGTGTGTTCGAGGCAGGAACTTGCAACACTGAGCAACAAGAATGATGAAATTTTTATCCACTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCAAATATTTGCTCGGCGCCCCCTCTGTGTCAGGAACAGTTGGAAATGCGTTTCCCAACCTTGCCTAACCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCCCTGGAATGTTTTCCACTTCCTGGGTCATTGCCTCCAGAGATCAAAGCCCCCATCCACACAGTGGGCTGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATGGATCCATGCAGCGATCTGGTCCTGGTGCTGTGGAATCAGCTTTGCACAAGGCCCCAGAAGGTCTGCGTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGAGCCTTCCTGTTGGGGCCTCAGTCTTCTCATCTGAAAAATGGGAGCAAACTCAGTTCTGCCATGCCCAGTG 1258
Query 1 --------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCA 24
.||||.||||...|||||||||||
Sbjct 1259 TGGGTGTGATGTCACATCAGATGGAGTCTCGCTCTGTCACCCAGGCTGAAGTGCAATGGCAAGATCTCAGCTCA 1332
Query 25 CTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGT 98
||||||||||||.|||||||.|||||||||||||.|||||||.|||||..|||||||||||||||||| ||
Sbjct 1333 CTGCAACCTCCACCTCCCAGTTTCAAGCGATTCTTGTGCCTCAGCCTCTGGAGTAGCTGGGATTACAG----GT 1402
Query 99 G----CCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCT 168
| ||||.||||....||.||||||||||||||||.|||||||||||||||||.||||||.|||||||||||
Sbjct 1403 GCCCACCACCACACCTGGCTGATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCT 1476
Query 169 CGAACTCCTGACCTCAAG-------------------------------------------------------- 186
|.||||||||||||||||
Sbjct 1477 CAAACTCCTGACCTCAAGTGTTCTGCCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCCTGAGCCACTGTG 1550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1551 CCCGACCACCATGTTGTATTGTTACTGTTACTGCTCTCCTGTCCTGCACCTGCCCTGCCTGCCTCCCTTGGCTG 1624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1625 GGCTGTAAAACCTTGAGGGGTAACGTATCTTATTCATGTTTCTTGTCCTGGTACCAGCACAGCAACTGACATGG 1698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1699 ATGGGGGGTTAGGGGCTCAGAAAGCATTGCCCTAAAATATGGCGCTCTGACATGAAGCAGCCTCAAGGTCTATC 1772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1773 TGACCTCCCTGCCTCCTTCTCTGAATCCTCTGTCTCTCTCAAAGTGCAGGATGACGCTGTTCTCTGAAGTTTCT 1846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1847 TTATCTGCCTAGAAACGGGACCTGCCAAAGGGGAACACAATTACCTTCCCTGGAATATCATTAGCTAGAGGTTA 1920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1921 AAACTCATATCCTAGAGGATATGAGACTGAACATTAAACACCACACCTACAGCCCAGATAAACTTCATCCCAAA 1994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1995 CCATTATCTGCTCTCTTTCCCTTTCAATGTCCAAAGAAATTATTAATTATCATCTGGACGCTGGACTCATTCAT 2068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2069 TTCCCCCCTAAAAACCATTGACTGTCCTTCAAATTGCCACGTGTCCCCCATCTCTCCTTCCCCCGTGAAGAAGG 2142
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2143 GCGCATGCACCTGTACCCCACTGGGTTATTGGGTAACTTCTGTGATTCCCTCATGCTCTGCACGTTGAAATAAA 2216
Query 187 ----------------- 186
Sbjct 2217 TTTTGTCTTTTCTCCAA 2233
