Nucleotide Global Alignment

Description

Query:
TRCN0000473708
Subject:
XR_940700.3
Aligned Length:
3707
Identities:
159
Gaps:
3526

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGAATTCTTCCCTTCCTCCTTCCTGCCGCAGTGGTGTACTGAGCACTTTCACGTAAGAGTATTCCTCCACTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACAACCCCCCGGAGAAGTACTGGTGTCACTGCCACCTGCGAGAGTTTGCGGCTACCTCCCCAAGAGGCAGTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGGTTATTGTGACCTATGATGTTTATTCAACTACTGTTGACGGGCTGCTGTGCACAGGGAACCTAGTAGGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGACCCCTGCCATCGTGCAGCTTACTGTCAGGTTGACACAGACCTTAAGAAAGAACAAAATTTTAAATAAATTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAACGACACCTGTAATTTGAGAAGATGCTTGATATCAGAAGAGGAGAAGAGTGGAGAGGGGTGGAGTGGCAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGAGAGCCTCCAAACCAAAAGCCTGCGGCAGAGGCCCTAGGAGGCAAGCACTTAACCATGTTTCAGGACTAGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACGAAACATGTGACAAGACCTTTAAAAACAAATAGAATGGGATGGAATAAAGTTGGATGAGTAAGCAGGCATCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATCATTCAGAAACTTGTTGTCCAAGTTGAAGAATTTGTTTAGTATTGTATAATAAATGCAGAGGAAGCTATAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACACTTATAATTTACATTTTTTAAAGGCCACGTTGTAGCTCAATCGGATAGTTTGTCTTTTGATGGGATGTAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATACAGTATCATCATGGTATATTCCAGGCAAAAATATTTAACTTGAATCTGTCAAGCCTTTGCATCTAACACAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTATAAAAAATACAACAGATAGATGAACAAACTAAATGATGCCAGAGGAAGTAACTAGACAGATCCAGAAGGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAAACATTCTGCAGGATAACTGGCCCATCTCTTCAACAATTTGTCATGATAAAAGCAACTGCTTTATGAAAAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATTTAAGGGACATAACAGTTTGAATTGGATCCTGGTTTGAACAGACTGTCTATAAAATGCATTTTCAGGACCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTAAAGAAATATGAATGTAGATGGACTGAGTATTGGATAAAATAGAACTGTATTGCCATGGAAAAGATCATTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTGAAAAGAGCAAGTCACGAAATAGTATGTTACAGCATCTCATTTTGGTTTAAAAATGCACATATATGTATTTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGTACAACTAAAAAAATAGTGGGCTTATACCCTAAGGTGTTAGTATTGGTAATCTTTGGAAGTGGAAATGTGTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTTTTTCTTTGTGTTTGCCTATCTTTTTCATTGTAACTTTTGCAGCACATAGACTACTTTCATTATAGTAAAA  1258

Query    1  -------------------------------------------------------------ATGCAGTGGCGCC  13
                                                                         .|||||||||.|.
Sbjct 1259  GTTTATTTTACCACAATTTTTTTTTTTTTAGAAAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACA  1332

Query   14  ATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGAT  87
            ||||||||.||||||||||||||.|||||||||||||||.||||||.||||||.||||.||||||||||||||.
Sbjct 1333  ATCTCAGCCCACTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGAC  1406

Query   88  TACAGGCGTGTGC-CACTACA---CTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGC  157
            |||||    |||| |||.|||   || ..||||||||||||||||||..||||||.||.||||.|..|||||||
Sbjct 1407  TACAG----GTGCACACCACATGCCT-GGCTAATTTTTGTATTTTTAATAGAGACTGGATTTCGCGATGTTGGC  1475

Query  158  CAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------------  186
            |.|||||||||||||||||||.|||||||                                             
Sbjct 1476  CCGGCTGGTCTCGAACTCCTGGCCTCAAGTGATCCACCCGCTTTAGCCTCCCAAAGTGCTGGGATTACAGGCGT  1549

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1550  GAGCCACTGCACCCGGCCTATTTTACCACAATTTATAAAAATTTTTGTTTATTTTAATTAAGCTATTCTATGTT  1623

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1624  AAAATAAGTAGCCACCCTTGGCTGATGCATAAAGAAAAAATTAGAGGAAGGAAAGAATGGAGGCAAGGAGGCAA  1697

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1698  ATCATGAGACCATTTCAGAAATCAAGACGAAATCAGGAAAGCTAACATTAGCAAGAGTGAACCAAACTGATAAT  1771

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1772  ATCTTTGAGTTTAAAACTGAAGAATTTACCAATGAACTGCATAGGAAAGTAAAGAAAAGAGAGTGGTCAAGATA  1845

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1846  GGTCCTGGTTTTGGGGCCTGAACATCTGAGTGGTTAGTAGAATCATTACCAGTTGATAACCCATGGAAGAGGGT  1919

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1920  GGGGGATGGGTGGTGTCTTGTAGGTTGGTTGACAGGACTGACCCATTGGGAAGATAACGAAGAAGCAAAGTATA  1993

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1994  TGAAAAGAGGAGAAAGGGTAACCAGAGGAGGGAGGATACAAAGGGAGTGATTAGCCATCAGAAAGATGAGGGAC  2067

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2068  ATGACATTTGTTGAGGCAGATGGCGGAGAAAAGAAAGTTAACATAGATGTGGTTAGTTTTGTGGCATTGACCAA  2141

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2142  AGGAAGATTAAGGTGATACTATCTGATGGCTTGGAATGAAAACCAAACTCCCTGCCACAACATGATGATCTTTC  2215

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2216  TCTGCAACTTCATATTTTGCCTCTTGTTCCTCATTTGTTACCACTGAGTCACAATGGTCTTTTTAGTTTCTCAA  2289

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2290  ACACACCAAGATCTTTCTTGCCTCATGTGACCTAGAATGTTTTCTCCCTTTCTTCATATCTCAGTTGAAAGGTC  2363

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2364  TCCTCTCCTCATCATCATACTATCTAAAGTAGATTCCCTCCCTTGTTAACCTCTAGCGCAGCCATTAGTTCCTT  2437

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2438  CATAACACTTACCCTAACTTGCAAGTATTTTGTTTGTTGATATAATTTTTATCTGACTTCCCCACTAAAATGTA  2511

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2512  AGCTCCATGAGGGCAAAAATTGTGTGTTTTGTATACTGATGCATCTCTAGCACTTGGTATAGCAGGCATTCAAT  2585

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2586  AAATATCATTAAATAAGTTTCACCCTTGTAAAAAAAAAAAATATATATATATAAAATATATTCTCTACTTCCAA  2659

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2660  AATAACACACTTTCACCAACAACAAGCACTCCAGCTAATTAGGCAATAGGCCAATAAGCAAAGAATTATGGTAT  2733

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2734  ATTAGTCAAGATTGGCTAGCTTATGTTCTGACAATAAACAATTTCAAAATCTCAGTTTCAATTTTAAACTCAAA  2807

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2808  GATACTAATAAACATTTGTTCTTTGCTCACACAAAGTCTAATATGGAACAGGCTTAGAGTTGTCCTCCAACCAG  2881

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2882  TGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGCCATCCCAACATGAGATTCCACTTTCACTGCAGAA  2955

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2956  GAGGAAATCTGTAGCATCATGCAGCAGCTTGTCACTACCTCAGCCCTCCTACTTCCACTTGCATTTCACTAGCT  3029

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3030  AGAACCTTTCACATGGCTCCACCAAACTGCAATGGGACTGGGAAGGGAGAATCAGATATTAGGGAGCATTTATA  3103

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3104  ATGCCTTCCAAGGGTGTGTTTCACTGCTTCCAAACTTGCTTATGATGATGTTTTTCATTTATGTAATGAAATGC  3177

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3178  CATATGTTCTTAGTGTGTATTCTCAGCATAACGAGTACATTTGGAGAATATTAAGTCAGTGGACTTTCCTTCTT  3251

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3252  GAAAATTCCTGGTTCTGGGCCTATCATTAACCCCACTGATTGAACCAGTGGAAATAGTTGCCTCTTCGAATGGA  3325

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3326  GAGAACCCTGCTGAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACATGGAGACGATAGCCTGAAA  3399

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3400  GTAAGCACTTATGATTTTTGGAGGAGTCTTTGTTATTAAGGAGAAAAGAGGCTTACAGAAGTCAGATTCAGAAG  3473

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3474  ACTGTAGTATTTTTACAATAAATGAGAGTAAACAGTATAAGGATTTGATGTAAGGGAAGTTCCTGCAGTGCAAG  3547

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3548  AAAGAAAGTCCTTTTGGTGCTGAGCGGAACAGTCTAAGAGAGAAAAGGTGAAGAACAAAAGGAAAATGTAAATG  3621

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3622  TGGTATTCACACTTCCCTACTCCACACTCAGGATAAACCTAGAGTATGAGGTAGAGGCGGGAATCTAGAGGGGA  3695

Query  187  -------  186
                   
Sbjct 3696  GGAAGCA  3702

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