Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_940700.3
- Aligned Length:
- 3707
- Identities:
- 159
- Gaps:
- 3526
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGAATTCTTCCCTTCCTCCTTCCTGCCGCAGTGGTGTACTGAGCACTTTCACGTAAGAGTATTCCTCCACTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAACCCCCCGGAGAAGTACTGGTGTCACTGCCACCTGCGAGAGTTTGCGGCTACCTCCCCAAGAGGCAGTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGTTATTGTGACCTATGATGTTTATTCAACTACTGTTGACGGGCTGCTGTGCACAGGGAACCTAGTAGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACCCCTGCCATCGTGCAGCTTACTGTCAGGTTGACACAGACCTTAAGAAAGAACAAAATTTTAAATAAATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAACGACACCTGTAATTTGAGAAGATGCTTGATATCAGAAGAGGAGAAGAGTGGAGAGGGGTGGAGTGGCAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGAGCCTCCAAACCAAAAGCCTGCGGCAGAGGCCCTAGGAGGCAAGCACTTAACCATGTTTCAGGACTAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGAAACATGTGACAAGACCTTTAAAAACAAATAGAATGGGATGGAATAAAGTTGGATGAGTAAGCAGGCATCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATCATTCAGAAACTTGTTGTCCAAGTTGAAGAATTTGTTTAGTATTGTATAATAAATGCAGAGGAAGCTATAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACTTATAATTTACATTTTTTAAAGGCCACGTTGTAGCTCAATCGGATAGTTTGTCTTTTGATGGGATGTAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATACAGTATCATCATGGTATATTCCAGGCAAAAATATTTAACTTGAATCTGTCAAGCCTTTGCATCTAACACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTATAAAAAATACAACAGATAGATGAACAAACTAAATGATGCCAGAGGAAGTAACTAGACAGATCCAGAAGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAACATTCTGCAGGATAACTGGCCCATCTCTTCAACAATTTGTCATGATAAAAGCAACTGCTTTATGAAAAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATTTAAGGGACATAACAGTTTGAATTGGATCCTGGTTTGAACAGACTGTCTATAAAATGCATTTTCAGGACCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAAAGAAATATGAATGTAGATGGACTGAGTATTGGATAAAATAGAACTGTATTGCCATGGAAAAGATCATTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGAAAAGAGCAAGTCACGAAATAGTATGTTACAGCATCTCATTTTGGTTTAAAAATGCACATATATGTATTTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTACAACTAAAAAAATAGTGGGCTTATACCCTAAGGTGTTAGTATTGGTAATCTTTGGAAGTGGAAATGTGTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTTTTTCTTTGTGTTTGCCTATCTTTTTCATTGTAACTTTTGCAGCACATAGACTACTTTCATTATAGTAAAA 1258
Query 1 -------------------------------------------------------------ATGCAGTGGCGCC 13
.|||||||||.|.
Sbjct 1259 GTTTATTTTACCACAATTTTTTTTTTTTTAGAAAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACA 1332
Query 14 ATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGAT 87
||||||||.||||||||||||||.|||||||||||||||.||||||.||||||.||||.||||||||||||||.
Sbjct 1333 ATCTCAGCCCACTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGAC 1406
Query 88 TACAGGCGTGTGC-CACTACA---CTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGC 157
||||| |||| |||.||| || ..||||||||||||||||||..||||||.||.||||.|..|||||||
Sbjct 1407 TACAG----GTGCACACCACATGCCT-GGCTAATTTTTGTATTTTTAATAGAGACTGGATTTCGCGATGTTGGC 1475
Query 158 CAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------------- 186
|.|||||||||||||||||||.|||||||
Sbjct 1476 CCGGCTGGTCTCGAACTCCTGGCCTCAAGTGATCCACCCGCTTTAGCCTCCCAAAGTGCTGGGATTACAGGCGT 1549
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1550 GAGCCACTGCACCCGGCCTATTTTACCACAATTTATAAAAATTTTTGTTTATTTTAATTAAGCTATTCTATGTT 1623
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1624 AAAATAAGTAGCCACCCTTGGCTGATGCATAAAGAAAAAATTAGAGGAAGGAAAGAATGGAGGCAAGGAGGCAA 1697
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1698 ATCATGAGACCATTTCAGAAATCAAGACGAAATCAGGAAAGCTAACATTAGCAAGAGTGAACCAAACTGATAAT 1771
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1772 ATCTTTGAGTTTAAAACTGAAGAATTTACCAATGAACTGCATAGGAAAGTAAAGAAAAGAGAGTGGTCAAGATA 1845
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1846 GGTCCTGGTTTTGGGGCCTGAACATCTGAGTGGTTAGTAGAATCATTACCAGTTGATAACCCATGGAAGAGGGT 1919
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1920 GGGGGATGGGTGGTGTCTTGTAGGTTGGTTGACAGGACTGACCCATTGGGAAGATAACGAAGAAGCAAAGTATA 1993
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1994 TGAAAAGAGGAGAAAGGGTAACCAGAGGAGGGAGGATACAAAGGGAGTGATTAGCCATCAGAAAGATGAGGGAC 2067
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2068 ATGACATTTGTTGAGGCAGATGGCGGAGAAAAGAAAGTTAACATAGATGTGGTTAGTTTTGTGGCATTGACCAA 2141
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2142 AGGAAGATTAAGGTGATACTATCTGATGGCTTGGAATGAAAACCAAACTCCCTGCCACAACATGATGATCTTTC 2215
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2216 TCTGCAACTTCATATTTTGCCTCTTGTTCCTCATTTGTTACCACTGAGTCACAATGGTCTTTTTAGTTTCTCAA 2289
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2290 ACACACCAAGATCTTTCTTGCCTCATGTGACCTAGAATGTTTTCTCCCTTTCTTCATATCTCAGTTGAAAGGTC 2363
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2364 TCCTCTCCTCATCATCATACTATCTAAAGTAGATTCCCTCCCTTGTTAACCTCTAGCGCAGCCATTAGTTCCTT 2437
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2438 CATAACACTTACCCTAACTTGCAAGTATTTTGTTTGTTGATATAATTTTTATCTGACTTCCCCACTAAAATGTA 2511
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2512 AGCTCCATGAGGGCAAAAATTGTGTGTTTTGTATACTGATGCATCTCTAGCACTTGGTATAGCAGGCATTCAAT 2585
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2586 AAATATCATTAAATAAGTTTCACCCTTGTAAAAAAAAAAAATATATATATATAAAATATATTCTCTACTTCCAA 2659
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2660 AATAACACACTTTCACCAACAACAAGCACTCCAGCTAATTAGGCAATAGGCCAATAAGCAAAGAATTATGGTAT 2733
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2734 ATTAGTCAAGATTGGCTAGCTTATGTTCTGACAATAAACAATTTCAAAATCTCAGTTTCAATTTTAAACTCAAA 2807
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2808 GATACTAATAAACATTTGTTCTTTGCTCACACAAAGTCTAATATGGAACAGGCTTAGAGTTGTCCTCCAACCAG 2881
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2882 TGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGCCATCCCAACATGAGATTCCACTTTCACTGCAGAA 2955
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2956 GAGGAAATCTGTAGCATCATGCAGCAGCTTGTCACTACCTCAGCCCTCCTACTTCCACTTGCATTTCACTAGCT 3029
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3030 AGAACCTTTCACATGGCTCCACCAAACTGCAATGGGACTGGGAAGGGAGAATCAGATATTAGGGAGCATTTATA 3103
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3104 ATGCCTTCCAAGGGTGTGTTTCACTGCTTCCAAACTTGCTTATGATGATGTTTTTCATTTATGTAATGAAATGC 3177
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3178 CATATGTTCTTAGTGTGTATTCTCAGCATAACGAGTACATTTGGAGAATATTAAGTCAGTGGACTTTCCTTCTT 3251
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3252 GAAAATTCCTGGTTCTGGGCCTATCATTAACCCCACTGATTGAACCAGTGGAAATAGTTGCCTCTTCGAATGGA 3325
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3326 GAGAACCCTGCTGAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACATGGAGACGATAGCCTGAAA 3399
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3400 GTAAGCACTTATGATTTTTGGAGGAGTCTTTGTTATTAAGGAGAAAAGAGGCTTACAGAAGTCAGATTCAGAAG 3473
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3474 ACTGTAGTATTTTTACAATAAATGAGAGTAAACAGTATAAGGATTTGATGTAAGGGAAGTTCCTGCAGTGCAAG 3547
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3548 AAAGAAAGTCCTTTTGGTGCTGAGCGGAACAGTCTAAGAGAGAAAAGGTGAAGAACAAAAGGAAAATGTAAATG 3621
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3622 TGGTATTCACACTTCCCTACTCCACACTCAGGATAAACCTAGAGTATGAGGTAGAGGCGGGAATCTAGAGGGGA 3695
Query 187 ------- 186
Sbjct 3696 GGAAGCA 3702
