Nucleotide Global Alignment
Description
- Query:
- TRCN0000473711
- Subject:
- XR_866007.2
- Aligned Length:
- 4769
- Identities:
- 515
- Gaps:
- 4199
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCGCCGGGCGATGAGTGGCGGCTCCGAGTCCACCCCTGGCGCGCCGGTGCGGGCGGGAGGCGGGGAGCGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCGGCGGCGGCGCAGCAGTAGCGAGCATGTGCTACGCAGCCCAGTAACCAGGGACGACCGCGGCAACCGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCGGCGGCTGCGGCTCTCAGCCCCGCGCAACTCCTCGCCGTGGCCGCTTGCACCGCCAAGGCCTGGCCCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGGTCCCCGAGGCCCCTTGAACCGTCAGCCGCGGTCGCGCAGCACGCCGGAGCCCCGCGCACGGGACGCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCACGGCCAGACAAAGGCGCGGCCCCGGCCCGGCCCAGCCCGGCCTGCCGGCCTCCGCGCACCCCGGCCCGAC 370
Query 1 ------------------------------------------------------------------ATGGGGAA 8
||||||||
Sbjct 371 CCAACCGCTCCCGCTGGGCGCCCCGAGCGGGTCCGGCCCGGGGAGCGGGGGCCGCGGCCGCCGAGCATGGGGAA 444
Query 9 ATCCAACAGCAAGTTGAAGCCCGAAGTTGTGGAGGAGCTGACCAGGAAGACCTACTTTACCGAGAAGGAGGTCC 82
|||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.||.|||||.||.||.|
Sbjct 445 ATCCAACAGCAAGTTGAAGCCTGAAGTTGTGGAGGAGCTGACCAGAAAAACCTACTTCACTGAGAAAGAAGTAC 518
Query 83 AGCAGTGGTACAAAGGCTTCATCAAGGACTGCCCCAGTGGGCAGCTGGATGCGGCAGGCTTCCAGAAGATCTAC 156
|||||||||||||.||||||||.||||||||||||||.||||||||||||||.||.||||||||||||||||||
Sbjct 519 AGCAGTGGTACAAGGGCTTCATTAAGGACTGCCCCAGCGGGCAGCTGGATGCCGCTGGCTTCCAGAAGATCTAC 592
Query 157 AAGCAATTCTTCCCGTTCGGAGACCCCACCAAGTTTGCCACATTTGTTTTCAACGTCTTTGATGAAAACAAGGA 230
|||||.||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||.||.||.||||||||
Sbjct 593 AAGCAGTTCTTCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGA 666
Query 231 CGGGCGAATTGAGTTCTCCGAGTTCATCCAGGCGCTGTCGGTGACCTCACGGGGAACCCTGGATGAGAAGCTAC 304
.||..|.||||||||||||||||||||||||||.|||||||||||||||.||||.|||||||||||.|||||.|
Sbjct 667 TGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATGAAAAGCTGC 740
Query 305 GGTGGGCCTTCAAGCTCTACGACTTGGACAATGATGGCTACATCACCAGGAATGAGATGCTGGACATTGTGGAT 378
|.||||||||||||||.||.||||||||.||.||||||||||||||||||||.||||||||.|||||.|||||.
Sbjct 741 GATGGGCCTTCAAGCTTTATGACTTGGATAACGATGGCTACATCACCAGGAACGAGATGCTCGACATAGTGGAC 814
Query 379 GCCATTTACCAGATGGTGGGGAATACCGTGGAGCTCCCAGAGGAGGAGAACACTCCTGAGAAGAGGGTGGACCG 452
|||||||||||||||||||||||.|||||||||||||||||.||.||||||||.||.|||||||||||||||||
Sbjct 815 GCCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACACCAGAGAAGAGGGTGGACCG 888
Query 453 GATCTTTGCCATGATGGATAAGAATGCCGACGGGAAGCTGACCCTGCAGGAGTTCCAGGAGGGGTCCAAGGCAG 526
||||||||||||||||||.||||||||.||.|||||||||||.||.||||||||||||||.||.||||||||.|
Sbjct 889 GATCTTTGCCATGATGGACAAGAATGCTGATGGGAAGCTGACTCTTCAGGAGTTCCAGGAAGGCTCCAAGGCTG 962
Query 527 ACCCGTCCATTGTGCAGGCGCTGTCCCTCTACGACGGGCTGGTA------------------------------ 570
|.||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 963 ATCCCTCCATTGTGCAGGCGCTGTCCCTCTACGATGGGCTGGTATAGTCCAGGCCCAGAGCTGTGGGTTCCCGG 1036
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1037 GAGTCTTCAAGTCAGGCACAACTCTGGATGTGTGGGAACCACTAGCCTCTTTCTGTGCCATGAGGCCACCGCAG 1110
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1111 CCTGACACCGCCCCTGTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAGCCGCCCTTGAGCCTCCAGGCCCT 1184
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1185 GGTTCTCTTCCCCCCTGCCCTGCATCCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTT 1258
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1259 GTCCAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCG 1332
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1333 GCAGCCACCCCATTCTTCCTGCTGTCCGGCCTGTGTGCTTTCTTTTTTTATTTCAAACGGACATTGTAAAAGAA 1406
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1407 AACAAACTACCTTCTGTTCTAAAGGATACTGACCATTGGGAGAAGGCCTCTGTCTCAGAGAACTCAGTCTCTGC 1480
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1481 CTGGTCCCCTGAAGTGGTGGTGACCAGGGCCAGTGAGGCTGCTGGCAGCAAGGGTGTTAGTGGCAGTGGCTCAC 1554
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1555 GTGATAACAGTATTGTGCGTTTTGTGGAGAAACTGAGGGTTTTTTTTATACTCATATATAATCGAACCTTTTAT 1628
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1629 TTATTGGTTGTTAACTCTTGCTGCTACCTTGTGTGTCTGAAACTCCCAGGATGCTGGGCCTCCGTTTACATGTG 1702
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1703 CACACCCTCATCCACCTGCCTGCCTCACTTGGGAGGATGGTGGCCTGCAGCGGCCAAGAAGCCAAAAATCTTTT 1776
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1777 CCTCTTTTTTTTTTCTCAGATACTGTGCCCCATTTTTGGAGAGGGGAAGGTGGGCATTGCTAAATGGCTAATGT 1850
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1851 ACTGTTCCCCCAGCTTCTGCCCTGGAGTCCCCACCCCTCGCCTCTGCTCTCCTTGGAATCCATAACACTTTTTT 1924
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1925 TCAAAAACAAACTTGAGGTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGCAACTTTAAATTTGATGTTAACAGC 1998
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1999 AGAAAGAAAATGGAGAGCCTTGTTCTGAGAGTAGGAGCTAGGAGAGTGTGTCCGGCACACAGTAGAGAGCGTAT 2072
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2073 GAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAAGAGGCTGGGTAGGTGTGGCATGTGAA 2146
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2147 TCCCTCTGCTCTCCTGCCCTGACTGCTTTTTGCAGTAGTCTTCTTCCCTACCAGGAGTCTGAGAAAGAAGGGGT 2220
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2221 AGGAGGATAACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCCATACTTGTCAC 2294
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2295 CAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAGCAGGGCTGGAAGGC 2368
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2369 CTGGTGGTTGGCTTTGTTGATCTTGTGTGATTCTTAGCCCAGAGCTAGGGTTCCTGTGTTTGTGACACTGTTCT 2442
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2443 ATGGCTGGGTTTTCTAGTCTGGAGGGCACAGGATCGTATGAATGACAGTACAACCCTCATATAGTCTCTGGGCA 2516
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2517 CAGCCTTGGTTGCCGGAGTGTGTGGTCTGCCTCAGAGGCTGACTGTGTCTGATGGCACCCCCTTTAGCCCCTCT 2590
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2591 TTAGGATTTCCCAGACTCTTGAGTCCCTTTGGGCTCATCCTCACCCTGGGGAGCTTTCCGGGGTGAGCCTCTCA 2664
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2665 GCTGCAGAGGCAGACCTAAGCTCACAGTTCTTGCTTCTAGTTTGTGTAACCTCTCTGCCCACCATTGAGAGGGG 2738
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2739 GAAATTGGTTCCCGGATTTTTCTTCTGCTCTGACTCTCCTGTAATCTCCAGCATACTTCTGGGAGACCAAAATC 2812
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2813 TTCCTTGCTAATGACCTGTGGATGAGCAGCTGTCCCCTGGAGGATTGATGTCCCCCATCAATAGGTGGCTTTGG 2886
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2887 CTGCCTGTCCATCCCTGTGGTGGGAATGCTTAGCTAGTCCATGCACACTCCCTCTTCCTGGGTAGACCCTTTGC 2960
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2961 TCATGCTGTGCCCATTGCTAGCCCACCAGATCCCACAGGGAAATTTTCTTTGAGACCTCTTTGGGTCATCTTCC 3034
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3035 TGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGGTTGAGAGGCCCTCTCTCTGGTCTCTGGA 3108
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3109 GACTCAGCTGTCCCTCTGTCAGTGGACATTTTTGGTGGCATCAAGACCCAGTGATTCCAAGCTGAGGAGAGGCT 3182
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3183 CCTCAGCTAAGGTGTTCACTTTTTTCTGTGGGTCCAGGCTTCCTCTCAGGATCTCGGCTTTTTGGTTTGTAGCC 3256
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3257 TTCAGTGTGGCTTTTGGTCTTCACAGTTTATGTCCTTGGGTCCAAGCCTCGGACTTTGAGACAGCCCTGGGCTG 3330
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3331 CCTTTTCCTGGCAGGGTGTGGGACACTGTTTTTGTTCAAGGACGCGTGCTGACTGATGTCTGTCTCTCTTTCAC 3404
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3405 CAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGGACCTCTC 3478
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3479 CAAGTTCATTTCCACAGAGGCCCCACCCCATCTGATGCTGCTTTCTTTAGGGGTGTGGTCCAGCCAGTGAGGCC 3552
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3553 AGGCCCCTGGTACCTCGGCAGACCCTCCTTTCTAGGGCCAGGAATGCTGTGACCCCCTCTTCCCAGCATCTGCT 3626
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3627 GCCCACCTTGTGTCGACGGTGACTTGGGAGCCTATCACGACTTTTCAGTATCTAGCCAGGTTTAAAATAACAAG 3700
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3701 GCAAATGTATGCAGCATTGACATCTCTTTCTTTAAATGGTCTACAGTTTGACAGGCCATTTCCTAGGAAGCTGT 3774
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3775 GTTTCCTTTGCACTTTGGGGGACCTTGTCTCTTCTAGGAGATAGTGGGGTGTGCAGTCCCTGGGGATCCCTGGC 3848
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3849 ATCTCTCCTGAGAAAGCCCCCACTGCTGGCCAAGCAGAAAGCCTCCAAGATTCTTTCCAGTGTGTTTCTGCATT 3922
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3923 TACATGATCTAAAGATGCATGGGGACGCCCCCTGGTGGTGATGAGCCGCAGTGGCACCCGGGGATGCAGTGGTC 3996
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3997 CAGCCAGAGGTGAGGCTAGAGGTGGGAAGGCCAAGGTGGGGGCTGTGATTTCCGAGGTCCTGGGCCCCCAGCCC 4070
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4071 TACATATCTGGCAGCATGCCTCCCACCCACACCTCTGCTAGGTCAGCTGGGACTGGCAAGGTAGTTGGCATAAG 4144
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4145 GGCACAGTGGGAAGCTTTGCCCTCCCAACTTTAATTTTTTAAAAAAATATCTGCAGAATAAATCCAATGGTTAA 4218
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4219 TTTTTGAATGAATAAAAGGCTTTTGTTGAATAAACAGTTGGTCCCATCTTCTGTGTTGGCATTAGGTTCAGGTT 4292
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4293 TTGTCTGCTTCCTAGGGTGGGGGCCCCACCCAACACCCTTTACCTCTGCATTCCCGGACCAAGTCTCCAGATTC 4366
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4367 CTTCAGGACGTTGGAGGAGTCACGTTACTCATTGGATCTGTTTCTCCATGCCTCAGAAAGAGGTCAGCCACCTT 4440
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4441 GCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCCTAGGGGTTCCTACAGCTCCCGACGGATTTTTAGGT 4514
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4515 GACTTAAAAACCAAATCTAGAGAAGGTGATGTTTTCACTCTGGTTGTTTGCATCCTTCCCTGCTTGTGTTCCCA 4588
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4589 GCACCCTCGGTGTCTCTTTTTGGGGTGCCGTCCTGTCTATGTCTTGGGGGACATAGGGAGGCCCTCGCCTGGTG 4662
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4663 GTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCCCTGCTCCCGATGTATGTCGTCTGTGTC 4736
Query 571 --------------------------------- 570
Sbjct 4737 TGGCCGATTAAACATGCTTCCTGGACCTCCCCA 4769
