Nucleotide Global Alignment
Description
- Query:
- TRCN0000473711
- Subject:
- XR_866008.2
- Aligned Length:
- 4791
- Identities:
- 515
- Gaps:
- 4221
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCGCCGGGCGATGAGTGGCGGCTCCGAGTCCACCCCTGGCGCGCCGGTGCGGGCGGGAGGCGGGGAGCGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCGGCGGCGGCGCAGCAGTAGCGAGCATGTGCTACGCAGCCCAGTAACCAGGGACGACCGCGGCAACCGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCGGCGGCTGCGGCTCTCAGCCCCGCGCAACTCCTCGCCGTGGCCGCTTGCACCGCCAAGGCCTGGCCCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGGTCCCCGAGGCCCCTTGAACCGTCAGCCGCGGTCGCGCAGCACGCCGGAGCCCCGCGCACGGGACGCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCACGGCCAGACAAAGGCGCGGCCCCGGCCCGGCCCAGCCCGGCCTGCCGGCCTCCGCGCACCCCGGCCCGAC 370
Query 1 ------------------------------------------------------------------ATGGGGAA 8
||||||||
Sbjct 371 CCAACCGCTCCCGCTGGGCGCCCCGAGCGGGTCCGGCCCGGGGAGCGGGGGCCGCGGCCGCCGAGCATGGGGAA 444
Query 9 ATCCAACAGCAAGTTGAAGCCCGAAGTTGTGGAGGAGCTGACCAGGAAGACCTACTTTACCGAGAAGGAGGTCC 82
|||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.||.|||||.||.||.|
Sbjct 445 ATCCAACAGCAAGTTGAAGCCTGAAGTTGTGGAGGAGCTGACCAGAAAAACCTACTTCACTGAGAAAGAAGTAC 518
Query 83 AGCAGTGGTACAAAGGCTTCATCAAGGACTGCCCCAGTGGGCAGCTGGATGCGGCAGGCTTCCAGAAGATCTAC 156
|||||||||||||.||||||||.||||||||||||||.||||||||||||||.||.||||||||||||||||||
Sbjct 519 AGCAGTGGTACAAGGGCTTCATTAAGGACTGCCCCAGCGGGCAGCTGGATGCCGCTGGCTTCCAGAAGATCTAC 592
Query 157 AAGCAATTCTTCCCGTTCGGAGACCCCACCAAGTTTGCCACATTTGTTTTCAACGTCTTTGATGAAAACAAGGA 230
|||||.||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||.||.||.||||||||
Sbjct 593 AAGCAGTTCTTCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGA 666
Query 231 CGGGCGAATTGAGTTCTCCGAGTTCATCCAGGCGCTGTCGGTGACCTCACGGGGAACCCTGGATGAGAAGCTAC 304
.||..|.||||||||||||||||||||||||||.|||||||||||||||.||||.|||||||||||.|||||.|
Sbjct 667 TGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATGAAAAGCTGC 740
Query 305 GGTGGGCCTTCAAGCTCTACGACTTGGACAATGATGGCTACATCACCAGGAATGAGATGCTGGACATTGTGGAT 378
|.||||||||||||||.||.||||||||.||.||||||||||||||||||||.||||||||.|||||.|||||.
Sbjct 741 GATGGGCCTTCAAGCTTTATGACTTGGATAACGATGGCTACATCACCAGGAACGAGATGCTCGACATAGTGGAC 814
Query 379 GCCATTTACCAGATGGTGGGGAATACCGTGGAGCTCCCAGAGGAGGAGAACACTCCTGAGAAGAGGGTGGACCG 452
|||||||||||||||||||||||.|||||||||||||||||.||.||||||||.||.|||||||||||||||||
Sbjct 815 GCCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACACCAGAGAAGAGGGTGGACCG 888
Query 453 GATCTTTGCCATGATGGATAAGAATGCCGACGGGAAGCTGACCCTGCAGGAGTTCCAGGAGGGGTCCAAGGCAG 526
||||||||||||||||||.||||||||.||.|||||||||||.||.||||||||||||||.||.||||||||.|
Sbjct 889 GATCTTTGCCATGATGGACAAGAATGCTGATGGGAAGCTGACTCTTCAGGAGTTCCAGGAAGGCTCCAAGGCTG 962
Query 527 ACCCGTCCATTGTGCAGGCGCTGTCCCTCTACGACGGGCTGGTA------------------------------ 570
|.||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 963 ATCCCTCCATTGTGCAGGCGCTGTCCCTCTACGATGGGCTGGTATAGTCCAGGCCCAGAGCTGTGGGTTCCCGG 1036
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1037 GAGTCTTCAAGTCAGGCACAACTCTGGGTAAGCCCAAATCCAGCCTCTGATGTGTGGGAACCACTAGCCTCTTT 1110
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1111 CTGTGCCATGAGGCCACCGCAGCCTGACACCGCCCCTGTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAGC 1184
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1185 CGCCCTTGAGCCTCCAGGCCCTGGTTCTCTTCCCCCCTGCCCTGCATCCACCTGCCGCCTGAAGCCACTGGTTC 1258
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1259 CAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACT 1332
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1333 GAGCGCCCGGCTGTCTCCCTCGGCAGCCACCCCATTCTTCCTGCTGTCCGGCCTGTGTGCTTTCTTTTTTTATT 1406
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1407 TCAAACGGACATTGTAAAAGAAAACAAACTACCTTCTGTTCTAAAGGATACTGACCATTGGGAGAAGGCCTCTG 1480
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1481 TCTCAGAGAACTCAGTCTCTGCCTGGTCCCCTGAAGTGGTGGTGACCAGGGCCAGTGAGGCTGCTGGCAGCAAG 1554
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1555 GGTGTTAGTGGCAGTGGCTCACGTGATAACAGTATTGTGCGTTTTGTGGAGAAACTGAGGGTTTTTTTTATACT 1628
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1629 CATATATAATCGAACCTTTTATTTATTGGTTGTTAACTCTTGCTGCTACCTTGTGTGTCTGAAACTCCCAGGAT 1702
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1703 GCTGGGCCTCCGTTTACATGTGCACACCCTCATCCACCTGCCTGCCTCACTTGGGAGGATGGTGGCCTGCAGCG 1776
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1777 GCCAAGAAGCCAAAAATCTTTTCCTCTTTTTTTTTTCTCAGATACTGTGCCCCATTTTTGGAGAGGGGAAGGTG 1850
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1851 GGCATTGCTAAATGGCTAATGTACTGTTCCCCCAGCTTCTGCCCTGGAGTCCCCACCCCTCGCCTCTGCTCTCC 1924
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1925 TTGGAATCCATAACACTTTTTTTCAAAAACAAACTTGAGGTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGCAA 1998
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1999 CTTTAAATTTGATGTTAACAGCAGAAAGAAAATGGAGAGCCTTGTTCTGAGAGTAGGAGCTAGGAGAGTGTGTC 2072
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2073 CGGCACACAGTAGAGAGCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAAGAGG 2146
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2147 CTGGGTAGGTGTGGCATGTGAATCCCTCTGCTCTCCTGCCCTGACTGCTTTTTGCAGTAGTCTTCTTCCCTACC 2220
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2221 AGGAGTCTGAGAAAGAAGGGGTAGGAGGATAACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGA 2294
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2295 GAGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTC 2368
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2369 TCGATCAGCAGGGCTGGAAGGCCTGGTGGTTGGCTTTGTTGATCTTGTGTGATTCTTAGCCCAGAGCTAGGGTT 2442
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2443 CCTGTGTTTGTGACACTGTTCTATGGCTGGGTTTTCTAGTCTGGAGGGCACAGGATCGTATGAATGACAGTACA 2516
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2517 ACCCTCATATAGTCTCTGGGCACAGCCTTGGTTGCCGGAGTGTGTGGTCTGCCTCAGAGGCTGACTGTGTCTGA 2590
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2591 TGGCACCCCCTTTAGCCCCTCTTTAGGATTTCCCAGACTCTTGAGTCCCTTTGGGCTCATCCTCACCCTGGGGA 2664
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2665 GCTTTCCGGGGTGAGCCTCTCAGCTGCAGAGGCAGACCTAAGCTCACAGTTCTTGCTTCTAGTTTGTGTAACCT 2738
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2739 CTCTGCCCACCATTGAGAGGGGGAAATTGGTTCCCGGATTTTTCTTCTGCTCTGACTCTCCTGTAATCTCCAGC 2812
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2813 ATACTTCTGGGAGACCAAAATCTTCCTTGCTAATGACCTGTGGATGAGCAGCTGTCCCCTGGAGGATTGATGTC 2886
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2887 CCCCATCAATAGGTGGCTTTGGCTGCCTGTCCATCCCTGTGGTGGGAATGCTTAGCTAGTCCATGCACACTCCC 2960
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2961 TCTTCCTGGGTAGACCCTTTGCTCATGCTGTGCCCATTGCTAGCCCACCAGATCCCACAGGGAAATTTTCTTTG 3034
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3035 AGACCTCTTTGGGTCATCTTCCTGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGGTTGAGA 3108
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3109 GGCCCTCTCTCTGGTCTCTGGAGACTCAGCTGTCCCTCTGTCAGTGGACATTTTTGGTGGCATCAAGACCCAGT 3182
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3183 GATTCCAAGCTGAGGAGAGGCTCCTCAGCTAAGGTGTTCACTTTTTTCTGTGGGTCCAGGCTTCCTCTCAGGAT 3256
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3257 CTCGGCTTTTTGGTTTGTAGCCTTCAGTGTGGCTTTTGGTCTTCACAGTTTATGTCCTTGGGTCCAAGCCTCGG 3330
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3331 ACTTTGAGACAGCCCTGGGCTGCCTTTTCCTGGCAGGGTGTGGGACACTGTTTTTGTTCAAGGACGCGTGCTGA 3404
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3405 CTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTT 3478
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3479 CTGTGCAGCCTGAGGACCTCTCCAAGTTCATTTCCACAGAGGCCCCACCCCATCTGATGCTGCTTTCTTTAGGG 3552
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3553 GTGTGGTCCAGCCAGTGAGGCCAGGCCCCTGGTACCTCGGCAGACCCTCCTTTCTAGGGCCAGGAATGCTGTGA 3626
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3627 CCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAGCCTATCACGACTTTTCAGTATC 3700
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3701 TAGCCAGGTTTAAAATAACAAGGCAAATGTATGCAGCATTGACATCTCTTTCTTTAAATGGTCTACAGTTTGAC 3774
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3775 AGGCCATTTCCTAGGAAGCTGTGTTTCCTTTGCACTTTGGGGGACCTTGTCTCTTCTAGGAGATAGTGGGGTGT 3848
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3849 GCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTGGCCAAGCAGAAAGCCTCCAAGATT 3922
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3923 CTTTCCAGTGTGTTTCTGCATTTACATGATCTAAAGATGCATGGGGACGCCCCCTGGTGGTGATGAGCCGCAGT 3996
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3997 GGCACCCGGGGATGCAGTGGTCCAGCCAGAGGTGAGGCTAGAGGTGGGAAGGCCAAGGTGGGGGCTGTGATTTC 4070
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4071 CGAGGTCCTGGGCCCCCAGCCCTACATATCTGGCAGCATGCCTCCCACCCACACCTCTGCTAGGTCAGCTGGGA 4144
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4145 CTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAACTTTAATTTTTTAAAAAAATATCT 4218
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4219 GCAGAATAAATCCAATGGTTAATTTTTGAATGAATAAAAGGCTTTTGTTGAATAAACAGTTGGTCCCATCTTCT 4292
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4293 GTGTTGGCATTAGGTTCAGGTTTTGTCTGCTTCCTAGGGTGGGGGCCCCACCCAACACCCTTTACCTCTGCATT 4366
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4367 CCCGGACCAAGTCTCCAGATTCCTTCAGGACGTTGGAGGAGTCACGTTACTCATTGGATCTGTTTCTCCATGCC 4440
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4441 TCAGAAAGAGGTCAGCCACCTTGCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCCTAGGGGTTCCTAC 4514
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4515 AGCTCCCGACGGATTTTTAGGTGACTTAAAAACCAAATCTAGAGAAGGTGATGTTTTCACTCTGGTTGTTTGCA 4588
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4589 TCCTTCCCTGCTTGTGTTCCCAGCACCCTCGGTGTCTCTTTTTGGGGTGCCGTCCTGTCTATGTCTTGGGGGAC 4662
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4663 ATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCCCTGCT 4736
Query 571 ------------------------------------------------------- 570
Sbjct 4737 CCCGATGTATGTCGTCTGTGTCTGGCCGATTAAACATGCTTCCTGGACCTCCCCA 4791
