Nucleotide Global Alignment

Description

Query:
TRCN0000473767
Subject:
XM_017319693.1
Aligned Length:
1002
Identities:
427
Gaps:
513

Alignment

Query    1  ATGGGACGTCGGTCATCAGATACTGAAGAAGAAAGCAGAAGCAAGAGAAAAAAGAAACACCGTAGACGGTCCTC  74
            ||||||||.|||||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.||.||.||
Sbjct    1  ATGGGACGCCGGTCTTCAGACACTGAAGAGGAAAGCAGAAGCAAGAGGAAAAAGAAACACCGGAGGCGCTCGTC  74

Query   75  CTCGAGCAGTTCTTCAGATAGTAGAACATACAGCCGAAAGAAAGGAGGAAGGAAATCAAGATCAAAGTCAAGAT  148
            .||.|||||.||||||||.||.||.|||||||||||.|||||.||.||.||||...|.||.||..|.|||||.|
Sbjct   75  TTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACTCAAGGT  148

Query  149  CTTGGTCCAGAGATCTTCAGCCTCGTTCACATTCTTATGATAGAAGACGCAGGCATCGATCAAGCAGTAGCTCT  222
            |.|||||.|||||.|..||||.|||.||.|||||||||||.|||||||||||||...||||||||||.||||||
Sbjct  149  CCTGGTCTAGAGACCGCCAGCTTCGCTCGCATTCTTATGAGAGAAGACGCAGGCGCAGATCAAGCAGCAGCTCT  222

Query  223  TCTTATGGCTCCAGAAGGAAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCTATAGAGTTCAGAGGTC  296
            |||||||||||||||||||||.|||||||.||||||||.|||||.|||||||||.|||||||||||||.|||||
Sbjct  223  TCTTATGGCTCCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCCGAGGGAAACCCTATAGAGTTCAAAGGTC  296

Query  297  TAGGTCAAAAAGCAGAACAAGAA---------------------------------------------------  319
            |.||||||||||||||||.||||                                                   
Sbjct  297  TCGGTCAAAAAGCAGAACCAGAAGGTCCAGGTCAAGGCCTCGTCCACGCTCACATAGTAGAAGCAGTGAAAGAT  370

Query  320  --------------------------------------------------------------------------  319
                                                                                      
Sbjct  371  CCAGTCACAGAAGAACCCGTAGCAGGTCCAGGGACAGAGACAGACGTAAAGTCCGGGACAAAGAGAAAAGAGAA  444

Query  320  -------------------------------------------------GGGAATCTGGAAACATCAAAGCTGG  344
                                                             ||||.||||||||||||||||||||
Sbjct  445  AAGGAGAAGGATAAAGGCAAAGACAAAGAAGTGCACAGCATCAAACGCGGGGATTCTGGAAACATCAAAGCTGG  518

Query  345  ATTAGAACATCTGCCACCAGCTGAACAGGCCAAAGCCAGACTACAGCTGGTTCTTGAAGCTGCTGCAAAAGCTG  418
            |||||||||||||||.||||||||.|||||||||||||||||.||..||||.||||||||||||||||||||||
Sbjct  519  ATTAGAACATCTGCCTCCAGCTGAGCAGGCCAAAGCCAGACTGCAATTGGTCCTTGAAGCTGCTGCAAAAGCTG  592

Query  419  ATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTG  492
            ||||||||||.||||||||||||||.|.||||||||||||||||||||||||.||.||||              
Sbjct  593  ATGAAGCATTAAAAGCCAAAGAAAGGAGTGAGGAAGAAGCAAAGAGAAGAAAAGAAGAAG--------------  652

Query  493  GTAGAACAAGTAAAAAGAGTAAAAGAAATTGAAGCTATTGAAAGTGATTCTTTTGTTCAGCAGACATTCAGATC  566
                     |||||||             ||.|                                         
Sbjct  653  ---------GTAAAAA-------------TGCA-----------------------------------------  663

Query  567  AAGTAAAGAAGTCAAAAAGTCAGTGGAACCTAGTGAAGTGAAACAAGCAACTTCAACATCAGGACCAGCATCAG  640
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  641  CAGTTGCTGATCCACCCAGTACTGAAAAAGAAATAGATCCTACCAGCATCCCTACTGCTATCAAGTACCAAGAT  714
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  715  GACAATTCCCTGGCCCATCCAAATTTATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAAT  788
                                                                                      
Sbjct  664  --------------------------------------------------------------------------  663

Query  789  TGCTCTCCGACAAGAAAGACTAATGGGCAGTCCTGTGGCC  828
                                                    
Sbjct  664  ----------------------------------------  663