Nucleotide Global Alignment
Description
- Query:
- TRCN0000473808
- Subject:
- XM_011526837.1
- Aligned Length:
- 4554
- Identities:
- 1886
- Gaps:
- 2664
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGTAGGGTCCGGAGGCTATGCGCGGAACGATGCAGGGGAGAAGCTGCCCTCTGTCATGGCGGGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGGCGCGGAGGGGCCAGTCCTCCCCGCCCCCCGCCCCACCAATCTGCCTACGGCGGCGGACGCGACTCTCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCTCCGAGGAGACGGTGCAGAACCGGGTGTCACTCGAGAAGGTGCTTGGCATCACAGCCCAGAACAGCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCTAACCTGTGACCCCGGCACAGGCCATGTGGCCTACCTGGCAGGCTGTGTGGTGGTGATTTTGGACCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGAACAAGCAGCAGCACATCTTTAACACCGCCAGGAAGTCTCTCAGTGCTCTGGCCTTCTCCCCTGATGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTACATAGTGACAGGGGAGAATGGGCATAGGCCTGCTGTGCGCATCTGGGATGTGGAGGAGAAGAATCAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGGAGATGCTAGGCCACAAGTATGGTGTGGCGTGTGTGGCCTTCTCACCCAATATGAAGCACATCGTGTCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTACCAACATGACATGGTGCTCAACGTCTGGGACTGGAAGAAAGACATCGTAGTGGCCTCCAACAAGGTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTGTAGAGTCATTGCCCTCTCCTTCTCAGAGGACAGCAGCTATTTTGTCACTGTTGGGAACCGCCATGTGAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCTGGTTCTTGGAAGTCTCCACTGAGACAAAGGTGACGAGCACAGTGCCCCTTGTAGGGCGCTCGGGCATCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCGAGCTGCACAACAACATCTTCTGTGGTGTGGCCTGCGGTCGGGGCCGGATGGCGGGCAGTACCTTCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCTACTCGGGCCTCCTCTGCCAGTTCAATGAGAAGAGGGTGCTGGAGAAGTGGATCAACCTGAAGGTCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGTCTTCCTGCCTCTGTGTCAGCCAGGAGCTCATCTTCTGTGGCTGCACAGATGGGATAGTCCGCATCTTCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCCCATAGCCTGCACTACCTCGCCAACCTGCCCAAGCCACACTACCTTGGGGTAGACGTGGCACAGGGCCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCCAGGAAGGCGGAAGCAGTCTACCCAGATACAGTGGCACTGACCTTCGACCCCATCCACCAGTGGCTGTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCGTGTATAAGGACCACAGCATCTACATCTGGGATGTCAAGGACATCAACAGAGTGGGCAAGGTGTGGTCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTCTTCCACAGCTCCTACGTTTGGAACGTGGAGGTGTATCCTGAGTTTGAAGACCAGAGAGCTTGTTTGCCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGGATCCTTTCTGACTTGTTCTTCAGACAACACCATTCGCTTCTGGAACTTGGACAGCAGCCCTGATTCTCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGCAGAAAAACATCTTCAGCAATACCCTGCTGAAGGTCGTGTACGTGGAGAATGACATCCAGCACCTGCAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATGTCACACTTCCCAGACCGGGGGAGCGAGAATGGGACACCCATGGACGTGAAAGCCGGGGTGCGGGTCATGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGTCAGTCCTGACGGCCAGCATTTGGCTTCAGGCGACCGAAGTGGAAATCTGAGGATCCACGAGCTGCACTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGGACGAGCTGGTCAAGGTGGAGGCCCATGATGCTGAGGTGCTGTGCCTGGAGTACTCCAAGCCAGAGACGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTGACCTTGCTGGCCTCAGCCAGTCGGGACCGGCTGATCCATGTGCTGAACGTGGAGAAGAACTACAACCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAGACGCTGGATGACCACTCCTCCTCCATCACCGCCATCAAGTTCGCTGGCAACAGAGACATCCAGATGATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGCTGTGGGGCTGACAAGAGCATCTACTTTCGCAGTGCCCAGCAGGGTTCGGATGGACTACACTTTGTCCGTAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCACCACGTAGCAGAGAAAACCACCTTGTATGACATGGACATTGACATCACCCAGAAGTACGTGGCCGTGGCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCAGGACCGCAATGTGAGAGTCTACAACACTGTGAACGGGAAGCAGAAGAAGTGCTACAAGGGCTCCCAGGGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GACGAAGGGTCCTTGCTGAAGGTCCATGTGGACCCCTCAGGCACCTTCCTGGCCACCAGCTGCTCTGACAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATCTCAGTGATTGACTTTTACTCGGGCGAGTGCATTGCCAAGATGTTTGGCCATTCAGAAATTATTACCAGCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGAAGTTCACCTATGACTGTCATCACTTGATCACAGTATCTGGAGACAGCTGCGTGTTCATCTGGCACCTGGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCGGAGATCACCAACTGCATGAAGCAGCACTTGCTGGAGATTGACCACCGGCAGCAGCAGCAGCACACAAATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAAGAAGCGGAGTGGCCACCCCAGGCAGGATACGTATGTGTCCACACCTAGTGAGATTCACTCCCTGAGCCCTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAGAGCAAACAGAGGATGATCTGGAGGAAGAGTGTGAGCCAGAAGAGATGCTGAAGACACCATCCAAAGATAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGGATCCAGATCCTCGTTGCCTGCTAACCAACGGCAAGCTGCCACTGTGGGCAAAGCGGCTGCTAGGGGACGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGATGTGGCAGATGGCTTGGCCTTCCACGCCAAGCGCAGCTACCAGCCCCACGGCCGCTGGGCAGAGCGGGCCG 2590
Query 1 -----------------------------------------------------------ATGAAGCCCGAGAGT 15
|||||||||||||||
Sbjct 2591 GCCAAGAGCCCCTCAAGACCATCCTGGATGCCCAGGACCTGGATTGCTACTTTACCCCCATGAAGCCCGAGAGT 2664
Query 16 CTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCA 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCA 2738
Query 90 GGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCT 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCT 2812
Query 164 ACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCT 2886
Query 238 GGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTC 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTC 2960
Query 312 GGGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCC 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GGGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCC 3034
Query 386 CTCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAG 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAG 3108
Query 460 GGACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGAC 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GGACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGAC 3182
Query 534 ACTGACTGAGTCCCCCTGCAG---------------AGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACC 592
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3183 ACTGACTGAGTCCCCCTGCAGAGAGCTCTTCCCCGCAGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACC 3256
Query 593 ACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCAT 3330
Query 667 ACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 ACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCA 3404
Query 741 GCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCC 814
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 3405 GCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCC 3478
Query 815 TGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCC 3552
Query 889 ACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCAC 3626
Query 963 CTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGG 3700
Query 1037 GCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 GCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAG 3774
Query 1111 GAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTG 3848
Query 1185 GGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCG 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 3849 GGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCG 3922
Query 1259 TGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 TGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTG 3996
Query 1333 AGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 AGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAA 4070
Query 1407 CCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCAGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCAC 1480
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 4071 CCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCGGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCAC 4144
Query 1481 TTGGTCTGTTCCAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCC 1554
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 TTGGTCTGTTACAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCC 4218
Query 1555 CTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 CTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCG 4292
Query 1629 TGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 TGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGT 4366
Query 1703 GGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 GGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCA 4440
Query 1777 GGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 GGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGA 4514
Query 1851 GCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 1890
||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 GCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 4554
