Construct: ORF TRCN0000473808

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013328.1_s317c1
Derived from:
ccsbBroadEn_16147
DNA Barcode:
ATTACGGCGATGCACCGGATTGTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WDR62 (284403)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473808
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 284403 WDR62 WD repeat domain 62 XM_011526843.1 81.4% 81.2% (many diffs)
2 human 284403 WDR62 WD repeat domain 62 XM_011526844.2 81.4% 81.2% (many diffs)
3 human 284403 WDR62 WD repeat domain 62 XM_011526842.1 62.8% 62.7% (many diffs)
4 human 284403 WDR62 WD repeat domain 62 XM_011526841.2 59.9% 59.7% (many diffs)
5 human 284403 WDR62 WD repeat domain 62 XM_011526840.2 52.9% 52.8% (many diffs)
6 human 284403 WDR62 WD repeat domain 62 XM_011526839.1 44.7% 44.5% (many diffs)
7 human 284403 WDR62 WD repeat domain 62 NM_173636.5 41.4% 41.3% (many diffs)
8 human 284403 WDR62 WD repeat domain 62 XM_011526837.1 41.4% 41.3% (many diffs)
9 human 284403 WDR62 WD repeat domain 62 NM_001083961.2 41.2% 41.1% (many diffs)
10 human 284403 WDR62 WD repeat domain 62 XM_017026665.1 41.2% 41.1% (many diffs)
11 human 284403 WDR62 WD repeat domain 62 XM_005258809.2 38.8% 38.7% (many diffs)
12 human 284403 WDR62 WD repeat domain 62 XM_011526838.1 36.2% 35.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1956
ORF length:
1890
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa gcccgagagt ctggagaact ccattctgga ttcactggag ccacagagcc
121tggccagcct gctgagtgag tcagagagtc cccaggaagc tggccgcggg cacccctcct
181tcctgcccca gcagaaggaa tcatctgagg ccagtgagct catcctctac tctctggagg
241cagaagtgac agtcacaggg acagacagcc agtattgcag gaaggaggtg gaggccgggc
301ctggagacca gcagggcgac tcctacctca gggtgtcctc cgacagccca aaggaccaga
361gcccgcctga ggactcgggg gagtcagagg ccgacctgga gtgcagcttc gcagccatcc
421actccccagc tccgcctcct gaccctgccc ctcggtttgc cacgtcgctg ccccatttcc
481caggatgcgc aggtcccaca gaagatgagc tgtccctgcc cgagggaccc agcgtcccca
541gcagctccct accccagact ccggagcagg agaagttcct ccgccaccac tttgagacac
601tgactgagtc cccctgcaga gctctgggag acgtggaggc ctctgaagct gaagaccact
661tcttcaaccc acgcctgagt atctccacgc agttcctctc aagcctccag aaggcatcca
721ggttcaccca taccttccct ccccgggcaa cccagtgcct tgtgaagtct ccagaggtca
781agctcatgga ccgaggcgga agccagccca gagcaggtac tggctacgcc tccccagaca
841ggacccacgt ccttgctgca gggaaggctg aagagaccct ggaggcctgg cgcccaccac
901ctccctgcct tacgagcctg gcgtcctgtg tccctgcttc ctccgtgctg cccacagaca
961ggaatctccc aacgcccaca tctgcaccca ccccaggcct ggctcagggt gtccatgccc
1021cctccacctg ttcctacatg gaggccactg ccagctcccg tgccaggata tcacgcagca
1081tctccctcgg tgacagtgag ggccctatcg tggccacact ggcccagccc ctccgtaggc
1141catcgtccgt tggggagctg gcctccttgg gccaggagct tcaggccatc accaccgcga
1201caacacccag tttggacagt gagggccaag agcctgccct gcgttcctgg ggcaaccacg
1261aggcccgggc caacctgaga ctgaccctgt caagtgcctg tgatgggctc ctgctgcccc
1321ccgtggatac ccagcctggc gtcaccgtcc ctgcagtgag cttcccagcc cctagccctg
1381tggaagagag cgccctgagg ctccacggct ctgcctttcg cccaagtctc ccagctcctg
1441agtcccctgg ccttcctgcc caccccagta acccccagct tccagaggcc cggcctggca
1501tccctggcag cactgcctcc ctcctggagc ccacctccgg tgcacttggt ctgttccagg
1561gcagccctgc ccgctggagt gagccctggg tgccggttga agccctgccc ccatctcccc
1621ttgagctgag cagggtgggg aacatcttgc acaggctgca gaccaccttc caagaagccc
1681tcgaccttta ccgtgtgttg gtctccagtg gccaggtgga caccgggcag cagcaggcac
1741ggactgagct ggtctccacc ttcctgtgga tCCACAGCCA GCTGGAGGCT GAATGCCTGG
1801TGGGGACTAG TGTGGCCCCA GCCCAGGCTC TGCCCAGCCC AGGACCCCCG TCCCCACCGA
1861CGCTGTACCC CCTGGCCAGC CCAGACCTGC AGGCCCTGCT GGAACACTAC TCGGAGCTGC
1921TGGTGCAGGC CGTGCGGAGG AAGGCACGGG GGCACTGCCC AACTTTCTTG TACAAAGTGG
1981TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2041CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2101AATTACGGCG ATGCACCGGA TTGTAACGCG TTAAGTCgac aatcaacctc tggattacaa
2161aatttgtgaa agatt

Download FASTA (ORF) (Full)