Nucleotide Global Alignment
Description
- Query:
- TRCN0000473808
- Subject:
- XM_011526838.1
- Aligned Length:
- 4554
- Identities:
- 1652
- Gaps:
- 2898
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGTAGGGTCCGGAGGCTATGCGCGGAACGATGCAGGGGAGAAGCTGCCCTCTGTCATGGCGGGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGGCGCGGAGGGGCCAGTCCTCCCCGCCCCCCGCCCCACCAATCTGCCTACGGCGGCGGACGCGACTCTCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCTCCGAGGAGACGGTGCAGAACCGGGTGTCACTCGAGAAGGTGCTTGGCATCACAGCCCAGAACAGCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCTAACCTGTGACCCCGGCACAGGCCATGTGGCCTACCTGGCAGGCTGTGTGGTGGTGATTTTGGACCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGAACAAGCAGCAGCACATCTTTAACACCGCCAGGAAGTCTCTCAGTGCTCTGGCCTTCTCCCCTGATGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTACATAGTGACAGGGGAGAATGGGCATAGGCCTGCTGTGCGCATCTGGGATGTGGAGGAGAAGAATCAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGGAGATGCTAGGCCACAAGTATGGTGTGGCGTGTGTGGCCTTCTCACCCAATATGAAGCACATCGTGTCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTACCAACATGACATGGTGCTCAACGTCTGGGACTGGAAGAAAGACATCGTAGTGGCCTCCAACAAGGTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTGTAGAGTCATTGCCCTCTCCTTCTCAGAGGACAGCAGCTATTTTGTCACTGTTGGGAACCGCCATGTGAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCTGGTTCTTGGAAGTCTCCACTGAGACAAAGGTGACGAGCACAGTGCCCCTTGTAGGGCGCTCGGGCATCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCGAGCTGCACAACAACATCTTCTGTGGTGTGGCCTGCGGTCGGGGCCGGATGGCGGGCAGTACCTTCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCTACTCGGGCCTCCTCTGCCAGTTCAATGAGAAGAGGGTGCTGGAGAAGTGGATCAACCTGAAGGTCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGTCTTCCTGCCTCTGTGTCAGCCAGGAGCTCATCTTCTGTGGCTGCACAGATGGGATAGTCCGCATCTTCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCCCATAGCCTGCACTACCTCGCCAACCTGCCCAAGCCACACTACCTTGGGGTAGACGTGGCACAGGGCCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCCAGCTTCCTCTTCCACAGGAAGGCGGAAGCAGTCTACCCAGATACAGTGGCACTGACCTTCGACCCCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACCAGTGGCTGTCCTGCGTGTATAAGGACCACAGCATCTACATCTGGGATGTCAAGGACATCAACAGAGTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAAGGTGTGGTCAGAGCTCTTCCACAGCTCCTACGTTTGGAACGTGGAGGTGTATCCTGAGTTTGAAGACCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGCTTGTTTGCCATCAGGATCCTTTCTGACTTGTTCTTCAGACAACACCATTCGCTTCTGGAACTTGGACAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCCCTGATTCTCACTGGCAGAAAAACATCTTCAGCAATACCCTGCTGAAGGTCGTGTACGTGGAGAATGACAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGCACCTGCAGGACATGTCACACTTCCCAGACCGGGGGAGCGAGAATGGGACACCCATGGACGTGAAAGCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGTGCGGGTCATGCAGGTCAGTCCTGACGGCCAGCATTTGGCTTCAGGCGACCGAAGTGGAAATCTGAGGATC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGAGCTGCACTTCATGGACGAGCTGGTCAAGGTGGAGGCCCATGATGCTGAGGTGCTGTGCCTGGAGTACTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGCCAGAGACGGGGCTGACCTTGCTGGCCTCAGCCAGTCGGGACCGGCTGATCCATGTGCTGAACGTGGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAACTACAACCTGGAGCAGACGCTGGATGACCACTCCTCCTCCATCACCGCCATCAAGTTCGCTGGCAACAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCATCTACTTTCGCAGTGCCCAGCAGGGTTCGGATGGACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACACTTTGTCCGTACCCACCACGTAGCAGAGAAAACCACCTTGTATGACATGGACATTGACATCACCCAGAAGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGTGGCCGTGGCCTGCCAGGACCGCAATGTGAGAGTCTACAACACTGTGAACGGGAAGCAGAAGAAGTGCTAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAGGGCTCCCAGGGTGACGAAGGGTCCTTGCTGAAGGTCCATGTGGACCCCTCAGGCACCTTCCTGGCCACCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGCTCTGACAAAAGCATCTCAGTGATTGACTTTTACTCGGGCGAGTGCATTGCCAAGATGTTTGGCCATTCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAATTATTACCAGCATGAAGTTCACCTATGACTGTCATCACTTGATCACAGTATCTGGAGACAGCTGCGTGTTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATCTGGCACCTGGGCCCGGAGATCACCAACTGCATGAAGCAGCACTTGCTGGAGATTGACCACCGGCAGCAGCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCAGCACACAAATGACAAGAAGCGGAGTGGCCACCCCAGGCAGGATACGTATGTGTCCACACCTAGTGAGATTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTCCCTGAGCCCTGGAGAGCAAACAGAGGATGATCTGGAGGAAGAGTGTGAGCCAGAAGAGATGCTGAAGACA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCATCCAAAGATAGCTTGGATCCAGATCCTCGTTGCCTGCTAACCAACGGCAAGCTGCCACTGTGGGCAAAGCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCTGCTAGGGGACGATGATGTGGCAGATGGCTTGGCCTTCCACGCCAAGCGCAGCTACCAGCCCCACGGCCGCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGCAGAGCGGGCCGGCCAAGAGCCCCTCAAGACCATCCTGGATGCCCAGGACCTGGATTGCTACTTTACCCCC 2664
Query 1 ATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCCTGGCCAGCCTGCTGAGTGA 2738
Query 75 GTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAGAAGGAATCATCTGAGGCCA 2812
Query 149 GTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAGCCAGTATTGCAGGAAGGAG 2886
Query 223 GTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCGACAGCCCAAAGGACCAGAG 2960
Query 297 CCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCCATCCACTCCCCAGCTCCGC 370
||||||||||| |||||
Sbjct 2961 CCCGCCTGAGG-------------------------------------------------------AGCTC--- 2976
Query 371 CTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGCAGGTCCCACAGAAGATGAG 444
||||| |||
Sbjct 2977 -----------------------------------------TTCCC------CGC------------------- 2984
Query 445 CTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGGAGCAGGAGAAGTTCCTCCG 518
Sbjct 2985 -------------------------------------------------------------------------- 2984
Query 519 CCACCACTTTGAGACACTGACTGAGTCCCCCTGCAGAGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACC 592
||||||||||||||||||||||||||||||||||||||
Sbjct 2985 ------------------------------------AGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACC 3022
Query 593 ACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3023 ACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCAT 3096
Query 667 ACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3097 ACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCA 3170
Query 741 GCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCC 814
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 3171 GCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACCCACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCC 3244
Query 815 TGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3245 TGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCC 3318
Query 889 ACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3319 ACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCAC 3392
Query 963 CTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3393 CTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGG 3466
Query 1037 GCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3467 GCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAG 3540
Query 1111 GAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3541 GAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTG 3614
Query 1185 GGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCG 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 3615 GGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCG 3688
Query 1259 TGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3689 TGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTG 3762
Query 1333 AGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3763 AGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAA 3836
Query 1407 CCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCAGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCAC 1480
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 3837 CCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCGGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCAC 3910
Query 1481 TTGGTCTGTTCCAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCC 1554
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3911 TTGGTCTGTTACAGGGCAGCCCTGCCCGCTGGAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCC 3984
Query 1555 CTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3985 CTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCG 4058
Query 1629 TGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4059 TGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGT 4132
Query 1703 GGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4133 GGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCA 4206
Query 1777 GGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4207 GGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGA 4280
Query 1851 GCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 1890
||||||||||||||||||||||||||||||||||||||||
Sbjct 4281 GCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 4320
