Nucleotide Global Alignment
Description
- Query:
- TRCN0000473808
- Subject:
- XM_011526839.1
- Aligned Length:
- 4218
- Identities:
- 1886
- Gaps:
- 2328
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGTAGGGTCCGGAGGCTATGCGCGGAACGATGCAGGGGAGAAGCTGCCCTCTGTCATGGCGGGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGGCGCGGAGGGGCCAGTCCTCCCCGCCCCCCGCCCCACCAATCTGCCTACGGCGGCGGACGCGACTCTCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCTCCGAGGAGACGGTGCAGAACCGGGTGTCACTCGAGAAGGTGCTTGGCATCACAGCCCAGAACAGCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCTAACCTGTGACCCCGGCACAGGCCATGTGGCCTACCTGGCAGGCTGTGTGGTGGTGATTTTGGACCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGAACAAGCAGCAGCACATCTTTAACACCGCCAGGAAGTCTCTCAGTGCTCTGGCCTTCTCCCCTGATGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTACATAGTGACAGGGGAGAATGGGCATAGGCCTGCTGTGCGCATCTGGGATGTGGAGGAGAAGAATCAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGGAGATGCTAGGCCACAAGTATGGTGTGGCGTGTGTGGCCTTCTCACCCAATATGAAGCACATCGTGTCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTACCAACATGACATGGTGCTCAACGTCTGGGACTGGAAGAAAGACATCGTAGTGGCCTCCAACAAGGTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTGTAGAGTCATTGCCCTCTCCTTCTCAGAGGACAGCAGCTATTTTGTCACTGTTGGGAACCGCCATGTGAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCTGGTTCTTGGAAGTCTCCACTGAGACAAAGGTGACGAGCACAGTGCCCCTTGTAGGGCGCTCGGGCATCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCGAGCTGCACAACAACATCTTCTGTGGTGTGGCCTGCGGTCGGGGCCGGATGGCGGGCAGTACCTTCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCTACTCGGGCCTCCTCTGCCAGTTCAATGAGAAGAGGGTGCTGGAGAAGTGGATCAACCTGAAGGTGTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGAGTTTGAAGACCAGAGAGCTTGTTTGCCATCAGGATCCTTTCTGACTTGTTCTTCAGACAACACCATTCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCTGGAACTTGGACAGCAGCCCTGATTCTCACTGGCAGAAAAACATCTTCAGCAATACCCTGCTGAAGGTCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTACGTGGAGAATGACATCCAGCACCTGCAGGACATGTCACACTTCCCAGACCGGGGGAGCGAGAATGGGACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCATGGACGTGAAAGCCGGGGTGCGGGTCATGCAGGTCAGTCCTGACGGCCAGCATTTGGCTTCAGGCGACCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGTGGAAATCTGAGGATCCACGAGCTGCACTTCATGGACGAGCTGGTCAAGGTGGAGGCCCATGATGCTGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCTGTGCCTGGAGTACTCCAAGCCAGAGACGGGGCTGACCTTGCTGGCCTCAGCCAGTCGGGACCGGCTGATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATGTGCTGAACGTGGAGAAGAACTACAACCTGGAGCAGACGCTGGATGACCACTCCTCCTCCATCACCGCCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAGTTCGCTGGCAACAGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCATCTACTTTCGCAGTGCCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCAGGGTTCGGATGGACTACACTTTGTCCGTACCCACCACGTAGCAGAGAAAACCACCTTGTATGACATGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTGACATCACCCAGAAGTACGTGGCCGTGGCCTGCCAGGACCGCAATGTGAGAGTCTACAACACTGTGAACGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAGCAGAAGAAGTGCTACAAGGGCTCCCAGGGTGACGAAGGGTCCTTGCTGAAGGTCCATGTGGACCCCTCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCACCTTCCTGGCCACCAGCTGCTCTGACAAAAGCATCTCAGTGATTGACTTTTACTCGGGCGAGTGCATTGCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGATGTTTGGCCATTCAGAAATTATTACCAGCATGAAGTTCACCTATGACTGTCATCACTTGATCACAGTATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGAGACAGCTGCGTGTTCATCTGGCACCTGGGCCCGGAGATCACCAACTGCATGAAGCAGCACTTGCTGGAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGACCACCGGCAGCAGCAGCAGCACACAAATGACAAGAAGCGGAGTGGCCACCCCAGGCAGGATACGTATGTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCCACACCTAGTGAGATTCACTCCCTGAGCCCTGGAGAGCAAACAGAGGATGATCTGGAGGAAGAGTGTGAGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGAAGAGATGCTGAAGACACCATCCAAAGATAGCTTGGATCCAGATCCTCGTTGCCTGCTAACCAACGGCAAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCACTGTGGGCAAAGCGGCTGCTAGGGGACGATGATGTGGCAGATGGCTTGGCCTTCCACGCCAAGCGCAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TACCAGCCCCACGGCCGCTGGGCAGAGCGGGCCGGCCAAGAGCCCCTCAAGACCATCCTGGATGCCCAGGACCT 2294
Query 1 -------------------ATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCC 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGATTGCTACTTTACCCCCATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGCCACAGAGCC 2368
Query 56 TGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAG 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTGCCCCAGCAG 2442
Query 130 AAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAG 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGGGACAGACAG 2516
Query 204 CCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGGTGTCCTCCG 2590
Query 278 ACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCC 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGCTTCGCAGCC 2664
Query 352 ATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGC 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCCAGGATGCGC 2738
Query 426 AGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGG 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCCAGACTCCGG 2812
Query 500 AGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAG---------------AGCT 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2813 AGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAGAGAGCTCTTCCCCGCAGCT 2886
Query 559 CTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCT 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCT 2960
Query 633 CTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTC 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTGTGAAGTCTC 3034
Query 707 CAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCAGACAGGACC 3108
Query 781 CACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCT 854
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCTTACGAGCCT 3182
Query 855 GGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCC 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTGCACCCACCC 3256
Query 929 CAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGG 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCCCGTGCCAGG 3330
Query 1003 ATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCC 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 ATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCTCCGTAGGCC 3404
Query 1077 ATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 ATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACACCCAGTTTGG 3478
Query 1151 ACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTG 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 ACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGACTGACCCTG 3552
Query 1225 TCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTT 1298
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGCAGTGAGCTT 3626
Query 1299 CCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTC 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTCTCCCAGCTC 3700
Query 1373 CTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCAGC 1446
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 3701 CTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATCCCTGGCGGC 3774
Query 1447 ACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTCCAGGGCAGCCCTGCCCGCTGGAGTGAGCC 1520
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 3775 ACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTACAGGGCAGCCCTGCCCGCTGGAGTGAGCC 3848
Query 1521 CTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGC 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 CTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGCACAGGCTGC 3922
Query 1595 AGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAG 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 AGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACCGGGCAGCAG 3996
Query 1669 CAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGAC 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 CAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCTGGTGGGGAC 4070
Query 1743 TAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCC 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 TAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCCTGGCCAGCC 4144
Query 1817 CAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 CAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCACGGGGGCAC 4218
