Nucleotide Global Alignment

Description

Query:
TRCN0000473808
Subject:
XM_011526840.2
Aligned Length:
3561
Identities:
1886
Gaps:
1671

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCAAGGACATCAACAGAGTGGGCAAGGTGTGGTCAGAGCTCTTCCACAGCTCCTACGTTTGGAACGTGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGGACTACTTACGTGAAGAGATATTTGCTCTCATCTGCCATTTGGTCACCCAGTGCTATACTTCATATAGGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGCAGGAGAAATACTTGATTCTTTCCCTTTATTTACCAGTTTTCAAGATAATGAATTGGTTCCCTATCCTCTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGGTGTATCCTGAGTTTGAAGACCAGAGAGCTTGTTTGCCATCAGGATCCTTTCTGACTTGTTCTTCAGACAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACCATTCGCTTCTGGAACTTGGACAGCAGCCCTGATTCTCACTGGCAGAAAAACATCTTCAGCAATACCCTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGAAGGTCGTGTACGTGGAGAATGACATCCAGCACCTGCAGGACATGTCACACTTCCCAGACCGGGGGAGCGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGGGACACCCATGGACGTGAAAGCCGGGGTGCGGGTCATGCAGGTCAGTCCTGACGGCCAGCATTTGGCTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGCGACCGAAGTGGAAATCTGAGGATCCACGAGCTGCACTTCATGGACGAGCTGGTCAAGGTGGAGGCCCATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATGCTGAGGTGCTGTGCCTGGAGTACTCCAAGCCAGAGACGGGGCTGACCTTGCTGGCCTCAGCCAGTCGGGAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGCTGATCCATGTGCTGAACGTGGAGAAGAACTACAACCTGGAGCAGACGCTGGATGACCACTCCTCCTCCAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CACCGCCATCAAGTTCGCTGGCAACAGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCATCTACTTTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCAGTGCCCAGCAGGGTTCGGATGGACTACACTTTGTCCGTACCCACCACGTAGCAGAGAAAACCACCTTGTAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GACATGGACATTGACATCACCCAGAAGTACGTGGCCGTGGCCTGCCAGGACCGCAATGTGAGAGTCTACAACAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGTGAACGGGAAGCAGAAGAAGTGCTACAAGGGCTCCCAGGGTGACGAAGGGTCCTTGCTGAAGGTCCATGTGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCCTCAGGCACCTTCCTGGCCACCAGCTGCTCTGACAAAAGCATCTCAGTGATTGACTTTTACTCGGGCGAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGCATTGCCAAGATGTTTGGCCATTCAGAAATTATTACCAGCATGAAGTTCACCTATGACTGTCATCACTTGAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CACAGTATCTGGAGACAGCTGCGTGTTCATCTGGCACCTGGGCCCGGAGATCACCAACTGCATGAAGCAGCACT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGCTGGAGATTGACCACCGGCAGCAGCAGCAGCACACAAATGACAAGAAGCGGAGTGGCCACCCCAGGCAGGAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACGTATGTGTCCACACCTAGTGAGATTCACTCCCTGAGCCCTGGAGAGCAAACAGAGGATGATCTGGAGGAAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTGTGAGCCAGAAGAGATGCTGAAGACACCATCCAAAGATAGCTTGGATCCAGATCCTCGTTGCCTGCTAACCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACGGCAAGCTGCCACTGTGGGCAAAGCGGCTGCTAGGGGACGATGATGTGGCAGATGGCTTGGCCTTCCACGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAGCGCAGCTACCAGCCCCACGGCCGCTGGGCAGAGCGGGCCGGCCAAGAGCCCCTCAAGACCATCCTGGATGC  1628

Query    1  ----------------------------ATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGC  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCAGGACCTGGATTGCTACTTTACCCCCATGAAGCCCGAGAGTCTGGAGAACTCCATTCTGGATTCACTGGAGC  1702

Query   47  CACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTG  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CACAGAGCCTGGCCAGCCTGCTGAGTGAGTCAGAGAGTCCCCAGGAAGCTGGCCGCGGGCACCCCTCCTTCCTG  1776

Query  121  CCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGG  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CCCCAGCAGAAGGAATCATCTGAGGCCAGTGAGCTCATCCTCTACTCTCTGGAGGCAGAAGTGACAGTCACAGG  1850

Query  195  GACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGG  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GACAGACAGCCAGTATTGCAGGAAGGAGGTGGAGGCCGGGCCTGGAGACCAGCAGGGCGACTCCTACCTCAGGG  1924

Query  269  TGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGC  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TGTCCTCCGACAGCCCAAAGGACCAGAGCCCGCCTGAGGACTCGGGGGAGTCAGAGGCCGACCTGGAGTGCAGC  1998

Query  343  TTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCC  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTCGCAGCCATCCACTCCCCAGCTCCGCCTCCTGACCCTGCCCCTCGGTTTGCCACGTCGCTGCCCCATTTCCC  2072

Query  417  AGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCC  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGGATGCGCAGGTCCCACAGAAGATGAGCTGTCCCTGCCCGAGGGACCCAGCGTCCCCAGCAGCTCCCTACCCC  2146

Query  491  AGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAG----------  554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 2147  AGACTCCGGAGCAGGAGAAGTTCCTCCGCCACCACTTTGAGACACTGACTGAGTCCCCCTGCAGAGAGCTCTTC  2220

Query  555  -----AGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCAC  623
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CCCGCAGCTCTGGGAGACGTGGAGGCCTCTGAAGCTGAAGACCACTTCTTCAACCCACGCCTGAGTATCTCCAC  2294

Query  624  GCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTG  697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GCAGTTCCTCTCAAGCCTCCAGAAGGCATCCAGGTTCACCCATACCTTCCCTCCCCGGGCAACCCAGTGCCTTG  2368

Query  698  TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCA  771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGAGCAGGTACTGGCTACGCCTCCCCA  2442

Query  772  GACAGGACCCACGTCCTTGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCT  845
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GACAGGACCCACGTCCTCGCTGCAGGGAAGGCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACCTCCCTGCCT  2516

Query  846  TACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTG  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCCCACAGACAGGAATCTCCCAACGCCCACATCTG  2590

Query  920  CACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCC  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  CACCCACCCCAGGCCTGGCTCAGGGTGTCCATGCCCCCTCCACCTGTTCCTACATGGAGGCCACTGCCAGCTCC  2664

Query  994  CGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCT  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  CGTGCCAGGATATCACGCAGCATCTCCCTCGGTGACAGTGAGGGCCCTATCGTGGCCACACTGGCCCAGCCCCT  2738

Query 1068  CCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACAC  1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  CCGTAGGCCATCGTCCGTTGGGGAGCTGGCCTCCTTGGGCCAGGAGCTTCAGGCCATCACCACCGCGACAACAC  2812

Query 1142  CCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGA  1215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  CCAGTTTGGACAGTGAGGGCCAAGAGCCTGCCCTGCGTTCCTGGGGCAACCACGAGGCCCGGGCCAACCTGAGA  2886

Query 1216  CTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCTGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGC  1289
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CTGACCCTGTCAAGTGCCTGTGATGGGCTCCTGCAGCCCCCCGTGGATACCCAGCCTGGCGTCACCGTCCCTGC  2960

Query 1290  AGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTC  1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  AGTGAGCTTCCCAGCCCCTAGCCCTGTGGAAGAGAGCGCCCTGAGGCTCCACGGCTCTGCCTTTCGCCCAAGTC  3034

Query 1364  TCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATC  1437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  TCCCAGCTCCTGAGTCCCCTGGCCTTCCTGCCCACCCCAGTAACCCCCAGCTTCCAGAGGCCCGGCCTGGCATC  3108

Query 1438  CCTGGCAGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTCCAGGGCAGCCCTGCCCGCTG  1511
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 3109  CCTGGCGGCACTGCCTCCCTCCTGGAGCCCACCTCCGGTGCACTTGGTCTGTTACAGGGCAGCCCTGCCCGCTG  3182

Query 1512  GAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGC  1585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183  GAGTGAGCCCTGGGTGCCGGTTGAAGCCCTGCCCCCATCTCCCCTTGAGCTGAGCAGGGTGGGGAACATCTTGC  3256

Query 1586  ACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACC  1659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  ACAGGCTGCAGACCACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCCAGGTGGACACC  3330

Query 1660  GGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCT  1733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  GGGCAGCAGCAGGCACGGACTGAGCTGGTCTCCACCTTCCTGTGGATCCACAGCCAGCTGGAGGCTGAATGCCT  3404

Query 1734  GGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCC  1807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405  GGTGGGGACTAGTGTGGCCCCAGCCCAGGCTCTGCCCAGCCCAGGACCCCCGTCCCCACCGACGCTGTACCCCC  3478

Query 1808  TGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCA  1881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479  TGGCCAGCCCAGACCTGCAGGCCCTGCTGGAACACTACTCGGAGCTGCTGGTGCAGGCCGTGCGGAGGAAGGCA  3552

Query 1882  CGGGGGCAC  1890
            |||||||||
Sbjct 3553  CGGGGGCAC  3561

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