Nucleotide Global Alignment
Description
- Query:
- TRCN0000473926
- Subject:
- XM_006496821.3
- Aligned Length:
- 1458
- Identities:
- 733
- Gaps:
- 645
Alignment
Query 1 ATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT 444
|||.|
Sbjct 1 ------------------------------------------------------------------ATGGT--- 5
Query 445 GACTATTTGAAACTAC-TAGGTAAAGGCACTTTTGG------GAA--AGTTATTTTGGTTCGAGAGAAGGCAAG 509
||.| ||| ||.|||| ||| |.| ..||||||
Sbjct 6 ------------CTCCTTAG---------CTGTTGGCCCTCAGAAGCACT-------CGTCGAGA--------- 42
Query 510 TGGAAAATACTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAA 583
|..||.|||| .||||| .|.||.|.||..| ||||||.|||..
Sbjct 43 TCCAACATAC------------CTTCTG-------------GTGTTCCCAAACA--------CACACATTCTTC 83
Query 584 CTGAAAGCAGAGTATTAAAGAACACTAGACATCCCTTTT-TAACATCCTTGAAATATTCCTTCCAG-ACAAAAG 655
| |||| |||||| || .|.||||..||.| || ||| |||
Sbjct 84 C--AAAG--------------------------CCTTTTATA--GTACTTGCCATGT--CT--CAGCACA---- 119
Query 656 ACCGTTTGTGTTTTGTGATGGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTC 729
||||..|||..|| || |||||||||||||||||||||||||||.||||||
Sbjct 120 -------GTGTCATGTCCTG-----TG-------------GCTGTTTTTCCATTTGTCGAGAGAGCGAGTGTTC 168
Query 730 TCTGAGGACCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCGGAAAGATTGT 803
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 169 TCTGAGGACCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCTTTGGACTATCTACATTCTGGAAAGATTGT 242
Query 804 GTACCGTGATCTCAAGTTGGAGAATCTAATGCGGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTT 877
|||||||||||||||||||||||||.|.||||..||.||.||||||||.|||||||||||.||||||||.||||
Sbjct 243 GTACCGTGATCTCAAGTTGGAGAATTTGATGCTAGATAAGGATGGCCATATAAAAATTACGGATTTTGGGCTTT 316
Query 878 GCAAAGAAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTG 951
|||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.||.||||||||||||||.
Sbjct 317 GCAAAGAAGGGATCACAGATGCAGCTACCATGAAGACATTCTGTGGCACACCAGAGTACCTGGCACCAGAGGTA 390
Query 952 TTAGAAGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGG 1025
||||||||||||||||||||||||||.||.||||||||||||.||||.||||||||||||||||||||||||||
Sbjct 391 TTAGAAGATAATGACTATGGCCGAGCCGTGGACTGGTGGGGCTTAGGTGTTGTCATGTATGAAATGATGTGTGG 464
Query 1026 GAGGTTACCTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTC 1099
.|||||.|||||||||||||||||.|||||||||||.||||||||||||.|||||||||||||||||||.||.|
Sbjct 465 AAGGTTGCCTTTCTACAACCAGGATCATGAGAAACTCTTTGAATTAATACTAATGGAAGACATTAAATTCCCCC 538
Query 1100 GAACACTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGA 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 GAACACTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGA 612
Query 1174 GGACCAGATGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAA 1247
||.||||||||||||||||||||.|||||.||.|||||.||.|||||||||||||||||||||||||||||.||
Sbjct 613 GGGCCAGATGATGCAAAAGAAATCATGAGGCATAGTTTTTTTTCTGGAGTAAACTGGCAAGATGTATATGACAA 686
Query 1248 AAAGCTTGTACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAG 1321
|||||||||||||||||||||.|||||||||||||||||.|||||.||..||||||||||||||||||||||||
Sbjct 687 AAAGCTTGTACCTCCTTTTAAGCCTCAAGTAACATCTGAAACAGACACCCGATATTTTGATGAAGAATTTACAG 760
Query 1322 CTCAGACTATTACAATAACACCACCTGAAAA--ATGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGGAAAA 1393
||||||||||||||||||||||||||||||| |||.| ||....||||||...||.| ||||.||
Sbjct 761 CTCAGACTATTACAATAACACCACCTGAAAAGTATGAC--------GACGACGGCATGGACGGCA--TGGACAA 824
Query 1394 AA-------------------------------------------------- 1395
..
Sbjct 825 CGAGCGGCGGCCACACTTCCCTCAGTTCTCCTACTCTGCAAGCGGACGGGAA 876
