Nucleotide Global Alignment

Description

Query:
TRCN0000473926
Subject:
XM_017320418.1
Aligned Length:
1447
Identities:
1123
Gaps:
245

Alignment

Query    1  ATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC  222
                                               ||||||||||||||||||||||||||.||||||||.|||
Sbjct    1  -----------------------------------ATGAAAACAGAACGACCAAAGCCAAATACATTTATTATC  39

Query  223  AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC  296
            ||||||||.||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||
Sbjct   40  AGATGTCTTCAGTGGACCACTGTTATAGAGAGAACATTTCATGTAGATACACCAGAGGAAAGAGAAGAGTGGAC  113

Query  297  AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC  370
            .|||||||||||.||.|||||.|||.||.|||||||||||||.||||||||.|||||||||||.|||||.||||
Sbjct  114  GGAAGCTATCCAAGCCGTAGCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGATGAATTGTAGCCCAACCTCAC  187

Query  371  AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT  444
            |.|||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||.||||||||||||
Sbjct  188  AGATTGATAATATAGGAGAAGAAGAGATGGATGCGTCTACAACCCATCATAAAAGAAAGACGATGAATGATTTT  261

Query  445  GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  262  GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA  335

Query  519  CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTGAAAGCA  592
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  336  CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTTACTGAAAGCA  409

Query  593  GAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTTGTGT  666
            |||||.||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  410  GAGTACTAAAGAACACCAGACATCCATTTTTAACATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTTGTGT  483

Query  667  TTTGTGATGGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCG  740
            |||||||||||||||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  484  TTTGTGATGGAATATGTTAATGGCGGAGAGCTGTTTTTCCATTTGTCGAGAGAGCGAGTGTTCTCTGAGGACCG  557

Query  741  CACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCGGAAAGATTGTGTACCGTGATC  814
            |||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||
Sbjct  558  CACACGTTTCTATGGTGCAGAAATTGTCTCTGCTTTGGACTATCTACATTCTGGAAAGATTGTGTACCGTGATC  631

Query  815  TCAAGTTGGAGAATCTAATGCGGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAAGAAGGG  888
            ||||||||||||||.|.||||..||.||.||||||||.|||||||||||.||||||||.|||||||||||||||
Sbjct  632  TCAAGTTGGAGAATTTGATGCTAGATAAGGATGGCCATATAAAAATTACGGATTTTGGGCTTTGCAAAGAAGGG  705

Query  889  ATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTGTTAGAAGATAA  962
            ||||||||||||||.|||||||||||||||||||||||.|||||.||.||||||||||||||.|||||||||||
Sbjct  706  ATCACAGATGCAGCTACCATGAAGACATTCTGTGGCACACCAGAGTACCTGGCACCAGAGGTATTAGAAGATAA  779

Query  963  TGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAGGTTACCTT  1036
            |||||||||||||||.||.||||||||||||.||||.||||||||||||||||||||||||||.|||||.||||
Sbjct  780  TGACTATGGCCGAGCCGTGGACTGGTGGGGCTTAGGTGTTGTCATGTATGAAATGATGTGTGGAAGGTTGCCTT  853

Query 1037  TCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAACACTCTCT  1110
            |||||||||||||.|||||||||||.||||||||||||.|||||||||||||||||||.||.||||||||||||
Sbjct  854  TCTACAACCAGGATCATGAGAAACTCTTTGAATTAATACTAATGGAAGACATTAAATTCCCCCGAACACTCTCT  927

Query 1111  TCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACCAGATGA  1184
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  928  TCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGGCCAGATGA  1001

Query 1185  TGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAAGCTTGTAC  1258
            ||||||||||||.|||||.||.|||||.||.|||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1002  TGCAAAAGAAATCATGAGGCATAGTTTTTTTTCTGGAGTAAACTGGCAAGATGTATATGACAAAAAGCTTGTAC  1075

Query 1259  CTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTCAGACTATT  1332
            ||||||||||.|||||||||||||||||.|||||.||..|||||||||||||||||||||||||||||||||||
Sbjct 1076  CTCCTTTTAAGCCTCAAGTAACATCTGAAACAGACACCCGATATTTTGATGAAGAATTTACAGCTCAGACTATT  1149

Query 1333  ACAATAACACCACCTGAAAA--ATGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGGAAAAAA---------  1395
            ||||||||||||||||||||  |||.|        ||....||||||...||.|  ||||.||..         
Sbjct 1150  ACAATAACACCACCTGAAAAGTATGAC--------GACGACGGCATGGACGGCA--TGGACAACGAGCGGCGGC  1213

Query 1396  -----------------------------------------  1395
                                                     
Sbjct 1214  CACACTTCCCTCAGTTCTCCTACTCTGCAAGCGGACGGGAA  1254

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