Nucleotide Global Alignment
Description
- Query:
- TRCN0000473960
- Subject:
- XM_006499906.3
- Aligned Length:
- 1955
- Identities:
- 1115
- Gaps:
- 691
Alignment
Query 1 ATGATGGGTATTGGTAAGAATACCACATCCAAATCAATGGAGGCTGGAAGTTCAACAGAAGGCAAATACGAAGA 74
|||||||||||.||.|||||.||..|||||||.|||.||||||||||..|.||.||.|||||||||||.|||||
Sbjct 1 ATGATGGGTATCGGCAAGAACACGGCATCCAAGTCAGTGGAGGCTGGGGGCTCCACGGAAGGCAAATATGAAGA 74
Query 75 CGAGGCAAAGCACCCAGCTTTCTTCACTCTTCCGGTGGTGATAAATGGAGGCGCCACCTCCAGCGGTGAGCAGG 148
.|||||.||||||.|...||||||.|||||.|||||||||||.|||||.||.|||||.||||||||.|||||||
Sbjct 75 GGAGGCGAAGCACTCGAATTTCTTTACTCTCCCGGTGGTGATCAATGGTGGGGCCACATCCAGCGGAGAGCAGG 148
Query 149 ACAATGAGGACACTGAGCTCATGGCGATCTACACTACGGAAAACGGCATTGCAGAAAAGAGCTCTCTCGCTGAG 222
||||.||||||||.|||||||||||.||||||||.||.||.||||||||||||||.|||||||||||.||.|||
Sbjct 149 ACAACGAGGACACGGAGCTCATGGCAATCTACACCACAGAGAACGGCATTGCAGAGAAGAGCTCTCTTGCAGAG 222
Query 223 ACCCTGGATAGCACTGGCAGTCTGGACCCCCAGCGATCAGACATGATTTATACCATAGAAGATGTTCCTCCCTG 296
||||||||.||||||||.||.|||||.||||||.|.||.||.|||||.||.||.||||||||||||||||||||
Sbjct 223 ACCCTGGACAGCACTGGGAGCCTGGATCCCCAGAGGTCGGATATGATCTACACTATAGAAGATGTTCCTCCCTG 296
Query 297 GTACCTGTGTATATTTCTGGGGCTACAGCACTACCTGACATGCTTCAGCGGCACGATCGCAGTGCCCTTCCTGT 370
||||.||||.|||||.|||||..|.||||||||||||||.||.|||||.|||||||||||.||||||||..||.
Sbjct 297 GTACTTGTGCATATTCCTGGGATTGCAGCACTACCTGACGTGTTTCAGTGGCACGATCGCGGTGCCCTTTTTGC 370
Query 371 TGGCCGATGCCATGTGTGTGGGGTACGACCAGTGGGCCACCAGCCAGCTCATTGGGACCATTTTCTTCTGTGTG 444
||||.|||||||||||.||||||.|.||||||||||||||||||||||||||.|||||||||||||||||.|||
Sbjct 371 TGGCTGATGCCATGTGCGTGGGGGATGACCAGTGGGCCACCAGCCAGCTCATCGGGACCATTTTCTTCTGCGTG 444
Query 445 GGAATCACTACTTTGCTACAGACAACGTTTGGATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGCATTTTT 518
|||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGAATCACTACATTGCTGCAGACAACATTTGGATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGCATTTTT 518
Query 519 GGCCCCTGCTCGAGCCATCCTGTCTTTAGATAAATGGAAATGTAACACCACAGATGTTTCAGTTGCCAATGGAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||..||.|||||||||||||||
Sbjct 519 GGCCCCTGCTCGAGCCATCCTGTCTTTAGATAAATGGAAATGTAACACCACAGAGATTACAGTTGCCAATGGAA 592
Query 593 CAGCAGAGCTGTTGCACACAGAACACATCTGGTATCCCCGGATCCGAGAGATCCAGGGGGCCATCATCATGTCC 666
|.|||||||||||| ||||||||||||.|||||||.||||.|||||||||||||||.||||||||||||
Sbjct 593 CGGCAGAGCTGTTG------GAACACATCTGGCATCCCCGAATCCAAGAGATCCAGGGGGCTATCATCATGTCC 660
Query 667 TCACTGATAGAAGTAGTCATCGGCCTCCTCGGCCTGCCTGGGGCTCTACTGAAGTACATCGGTCCCTTGACCAT 740
||||||||||||||.|||||.||||||||.|||||||||||||||||.||||.|||.||.||.|||||||||||
Sbjct 661 TCACTGATAGAAGTGGTCATTGGCCTCCTTGGCCTGCCTGGGGCTCTGCTGAGGTATATTGGACCCTTGACCAT 734
Query 741 TACACCCACGGTGGCCCTAATTGGCCTCTCTGGTTTCCAGGCAGCGGGGGAGAGAGCCGGGAAGCACTGGGGCA 814
.||||||||.||||||||.||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||
Sbjct 735 CACACCCACCGTGGCCCTCATTGGCCTCTCTGGTTTCCAGGCAGCAGGAGAGAGAGCCGGAAAGCACTGGGGCA 808
Query 815 TTGCCATGCTGACAATATTCCTAGTATTACTGTTTTCTCAATACGCCAGAAATGTTAAATTTCCTCTCCCGATT 888
|||||||||||||.||.||||||||.|||||.||.||.||.||.||||||||||||||||||||||||||.|||
Sbjct 809 TTGCCATGCTGACGATTTTCCTAGTGTTACTCTTCTCACAGTATGCCAGAAATGTTAAATTTCCTCTCCCAATT 882
Query 889 TATAAATCCAAGAAAGGATGGACTGCGTACAAGTTACAGCTGTTCAAAATGTTCCCTATCATCCTGGCCATCCT 962
||.||||||||||||||||||||.||.||||||||.|||||.|||||||||||.|||||.||||||||.|||||
Sbjct 883 TACAAATCCAAGAAAGGATGGACGGCATACAAGTTCCAGCTTTTCAAAATGTTTCCTATAATCCTGGCTATCCT 956
Query 963 GGTATCCTGGCTGCTCTGCTTCATCTTCACGGTGACAGACGTCTTCCCTCCCGACAGCACAAAGTATGGCTTCT 1036
.||.|||||||||||.||||||||||||||||||||.||.|||||||||.||.|||||||..|.|||||||.||
Sbjct 957 CGTGTCCTGGCTGCTGTGCTTCATCTTCACGGTGACTGATGTCTTCCCTTCCAACAGCACCGACTATGGCTACT 1030
Query 1037 ATGCTCGCACAGATGCCAGGCAAGGCGTGCTTCTGGTAGCCCCGTGGTTTAAGGTTCCATACCCATTTCAGTGG 1110
||||.|||||||||||||||.|.||.||.||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1031 ATGCACGCACAGATGCCAGGAAGGGTGTACTTCTGGTAGCCCCATGGTTTAAGGTTCCATACCCATTTCAGTGG 1104
Query 1111 GGACTGCCCACCGTGTCTGCGGCCGGTGTCATCGGCATGCTCAGTGCCGTGGTCGCCAGCATCATCGAGTCTAT 1184
||..||||||||||.|||||.||.||.|||||.|||||||||||||||||.||.|||||.|||||.|||||.||
Sbjct 1105 GGGATGCCCACCGTCTCTGCAGCTGGCGTCATTGGCATGCTCAGTGCCGTCGTAGCCAGTATCATTGAGTCCAT 1178
Query 1185 TGGTGACTACTACGCCTGTGCACGGCTGTCCTGTGCCCCACCCCCCCCCATCCACGCAATAAACA--GGTACGT 1256
.||||||||||||||||||||..||||.|||||||||||.||.||.||.|||||.|||||||||| ||||..|
Sbjct 1179 CGGTGACTACTACGCCTGTGCCAGGCTCTCCTGTGCCCCGCCGCCGCCTATCCATGCAATAAACAGGGGTATTT 1252
Query 1257 TCCTGAGAAGACAAG---TTCC---------------------------------------------------- 1275
||.|| ||.| | ||||
Sbjct 1253 TCGTG-GAGG----GTCTTTCCTGTGTTCTTGATGGCATATTTGGTACCGGGAATGGCTCTACCTCCTCCAGTC 1321
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1322 CCAATATTGGAGTTTTGGGAATTACAAAGGTCGGCAGCCGCCGGGTGATCCAGTACGGTGCAGCTCTCATGCTG 1395
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1396 GGCTTGGGCATGGTTGGCAAGTTCAGCGCCCTCTTCGCCTCCCTCCCAGACCCTGTGCTCGGAGCCCTCTTCTG 1469
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1470 CACACTCTTTGGAATGATCACGGCGGTCGGCCTCTCGAACCTGCAGTTCATTGACTTGAATTCTTCCCGGAACC 1543
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1544 TGTTTGTGCTTGGATTCTCCATCTTCTTTGGCCTTGTTCTTCCAAGTTACCTCCGACAAAACCCTCTGGTTACA 1617
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1618 GGAATAACAGGAATCGACCAAATCCTGAATGTCCTTCTCACCACCGCTATGTTTGTAGGAGGCTGTGTGGCTTT 1691
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1692 CATTTTGGACAACACCATCCCAGGTACCCCAGAGGAAAGAGGAATCAAGAAATGGAAGAAGGGTGTGAGCAAAG 1765
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1766 GAAGCAAGTCTCTGGACGGCATGGAGTCCTACAATCTGCCATTTGGCATGAACATTATTAAAAAGTACCGATGC 1839
Query 1276 -------------------------------------------------------------------------- 1275
Sbjct 1840 TTCAGCTACCTGCCCATCAGCCCCACCTTTGCAGGCTACACTTGGAAAGGCTTTGGGAAGAGTGAGAACAGCCG 1913
Query 1276 ------------------------------- 1275
Sbjct 1914 GAGTTCAGACAAAGATTCCCAGGCCACAGTA 1944
