Nucleotide Global Alignment
Description
- Query:
- TRCN0000474059
- Subject:
- NR_104455.2
- Aligned Length:
- 5367
- Identities:
- 1710
- Gaps:
- 3657
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGCCCGGCGCTTGATCTGGGCTGGGGGGAGGCGGTGGCGGCTGAGGGAAGGAGGAGGATAAGGAGGAGGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGCCAGCAGGAGGCAACGGCAGCGACGGGGCCGGGGTGATGGTGCAGGTGCCTGGGGTCGGTGCGGAGCTGC 148
Query 1 ---------------------------------------------------------------------ATGCT 5
|||||
Sbjct 149 CGGGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCGCCGCGTCGCTCCCGGGCGGGCGGGCGGGAAGATGCT 222
Query 6 GAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGACGACA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGACGACA 296
Query 80 GCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATCTGAAC 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATCTGAAC 370
Query 154 CTACTTGAGAAAGACTATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTTACAAA 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTACTTGAGAAAGACTATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTTACAAA 444
Query 228 GTCTGTGGTGAAACAATTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGCAGACC 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTCTGTGGTGAAACAATTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGCAGACC 518
Query 302 CTGCTGCTCTGAAAGAAGAAATAAC------------------------------------------------- 326
|||||||||||||||||||||||||
Sbjct 519 CTGCTGCTCTGAAAGAAGAAATAACCAGTGCAGTCGCAACAGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATA 592
Query 327 -------------------------------------------------------------------------- 326
Sbjct 593 CTACCTCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTTTTACCTATGAT 666
Query 327 -------------------------------------------------------------------------- 326
Sbjct 667 GTTGCCACTGTGGACATTTTTGGAGAGAGCTATGTTGCTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGGT 740
Query 327 -------------------------------------------------------------------------- 326
Sbjct 741 CTAATGGATATACTTGGAAAATGCCAAAGGCATAACACTGAAAGATAAGCTGGGAGATACTGAAGATTTAAAAT 814
Query 327 --------------------------------CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCA 368
||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAAATGGATAAACTCTGTGGTGCTGTTGGATCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCA 888
Query 369 TGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATT 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATT 962
Query 443 ATGACTCAGGGAAACACCCTGAAGGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATGACTCAGGGAAACACCCTGAAGGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAA 1036
Query 517 AGGAAAATTGCTGAGATTCACAAGACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAG 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGAAAATTGCTGAGATTCACAAGACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAG 1110
Query 591 AAAAGCACAGACATTGGAAACATATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTC 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAAAGCACAGACATTGGAAACATATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTC 1184
Query 665 TGGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTG 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTG 1258
Query 739 ACCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTAC 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTAC 1332
Query 813 ATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGC 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGC 1406
Query 887 TGGAGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAG- 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGG 1480
Query 960 ------------TGGCCGAGTTGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAA 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TAAATAGTGACATGGCCGAGTTGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAA 1554
Query 1022 TACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCC 1628
Query 1096 AGGACCCGCAGAAGAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCAC 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGGACCCGCAGAAGAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCAC 1702
Query 1170 ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGC 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGC 1776
Query 1244 GAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGC 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGC 1850
Query 1318 CTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGC 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGC 1924
Query 1392 CAGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGC 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGC 1998
Query 1466 CCGAGGAGGAACAGGTGAATAAGTTTGTTCTAAGTGTCCTCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTT 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCGAGGAGGAACAGGTGAATAAGTTTGTTCTAAGTGTCCTCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTT 2072
Query 1540 GTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGAC 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGAC 2146
Query 1614 CCCCGAGTTTGAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAG 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCCCGAGTTTGAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAG 2220
Query 1688 TGGTGAGCCTGCTCATTGACACC--------------------------------------------------- 1710
|||||||||||||||||||||||
Sbjct 2221 TGGTGAGCCTGCTCATTGACACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG 2294
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2295 GCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAA 2368
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2369 AGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGG 2442
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2443 GAAAACTCATTTTCTTCAGAAGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTCATCTTTCCAATTTGCAGG 2516
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2517 ATAATTTTTGGTTTTGAATTTTGATTTTTCATAGATGTATATTATTTTGAAGTATCAAATAAAAATAATTTATT 2590
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2591 TTACTATTACTGATTATTGCAGTAGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCC 2664
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2665 TCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATCACTGCAGCCTCAGCAGGG 2738
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2739 CAGGCCAGGGATCTGGACAATGGGGACTGTTTAGTTTTTTGTTTGTTTTTTTTGCCAGCCAGAACTTTTAAAAA 2812
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2813 AGTAAACATCCATGTAGAATGATTAAATGGAAAGTTGCTTCTTATGATGGTCTGAGTTGGATTTTCTTTTCCTT 2886
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2887 TTGTTTTTTCAAATCTGAGCAGAGTGGGCATCTGAAGGGACCACCGCTACAGCAACAGCAGCATCAGGGGTGGG 2960
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2961 GTAAGTCTGTCCCCTTAGTCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATAATGAAACTAGACTTAACGTG 3034
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3035 ATTTTTTTTTTCCGAAGAACCTCAAGACTTTTATAGTGCTCCAGGGGCGTTAAACGAATTCAGTGGTACCAGAG 3108
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3109 ATAGATAGTTCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGAAAGCAGAGTTAAGTTACCTGAGAGACTGT 3182
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3183 TGAGATTTGGATAGCAGTGCTTATTTTATATACACCCCCTTGACCCAAAGACTATTTCAATTTATATTTTAACA 3256
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3257 ACGAAATGTTATTTTCTTAACAATTCATATTTTGTTTTTACTTTATGGATTAAGAAAATAGAGCCTGATGAACT 3330
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3331 AAACGATGCAAGAAAGAAACTGATCCTGAGAATGAAAAGCTTCAGAAAATAGAATTCCAAGATCAACAGCCTTA 3404
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3405 GAAGGGACCAGGAAAAGAATCTTTTAAAATAGATTTCTAAGAGATGCCTACAAAACACAGAATGTGACCGTGGC 3478
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3479 AGAGACCAACACTTAGATGTAGAAATGCTGCCCCCTAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACC 3552
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3553 ATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAG 3626
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3627 CTCTTCAACTCTAAAACCAATCACACACAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAAGTCATCTGGGG 3700
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3701 CTTGAGGGCTTATTTAAGGGTGGTCAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACC 3774
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3775 CTAATTGGACAGCCCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTCCCCCGAG 3848
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3849 ATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTGGGGTTCTTAGGGAGAGATTTGCATA 3922
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3923 ATTTTAAAGACATCCTTTCATCTGGACCAGAGGTCAATCAACTTATGTCAAGTGCTACACAGTAAATATTTTGG 3996
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3997 TTTAGCACGCCATACTGTGTCACAACTGCTCAATTCTGCCATCACAGCACAAAAACAGCCACAGATAATTTGTA 4070
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4071 AATGAAGGAACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCTACAGGCCATAAT 4144
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4145 ACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTT 4218
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4219 TCCATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTGTTTAAAGGGTG 4292
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4293 CTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAG 4366
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4367 CTGGAATCTAAGAAGGGAAGAGGGCTTCTCTGACCATTTTCATACCAGCAACAATTTAGGCAGAATTATAAACA 4440
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4441 TCTATTTATCGAGTGACAATACAAACCGAAGGAGATCCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAGCC 4514
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4515 ACTGCCACTTGTCATCTACATAGCAAAGGCTTTATTTAGCACAGGACTAACGTGAAAAGTAGACCCAGAGATGA 4588
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4589 AAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCTGGTATCTACTGTCTTATGCAACATAGAAGATTACCTTT 4662
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4663 TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTCAACTCTGACCT 4736
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4737 TTCATATTCACATTAGAGACAGATGCAGTATTCCATATCCTAGTATGTTCCTTGTGTCTAGAGTTCTAACAGTA 4810
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4811 CAGTAGTCTATGCCATTTCTAACAGCTAAATTTTGCTCTGTAAACAGAAACTTTAGGGTTGTTTTTTTCCAGGG 4884
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4885 CTCATCCCAGAAAATATGGATAGAAAAGTTTCCTTCAGTTTGCTTTTCAAATAGTGCTTGAATAATAAACCTCC 4958
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4959 TTTGATTGGTGACTAGTCTTTTTTGGTATATCTCCACCTTTAAAAATTGTTCAAGTTTTTAACCTGGTTATACT 5032
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 5033 GTGTTCTAACATGTCTCTCATTTTCTCTCAAAATTAGTTTATCTCATTGTAGAAAAAGCAATGGTTTTCATAGC 5106
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 5107 TTCATCTATCAGGAAATAAAACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACC 5180
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 5181 TGCAAATGTGAATTTCTTAGATACATTTAAAAATATATAGTTGTTAACCTTCTGTGTGCCAAAAACTCTTAAGT 5254
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 5255 TACATTTTCCTTCAAAGCAATGTACTTTTTTCTACATATGCAGTATGTAGTTAGCATAAAATCATTGGTGCCAT 5328
Query 1711 --------------------------------------- 1710
Sbjct 5329 GAAGATTATTTTTAAACTTAAATAAATATTTAAATATCA 5367
