Nucleotide Global Alignment
Description
- Query:
- TRCN0000474059
- Subject:
- XR_931927.3
- Aligned Length:
- 4685
- Identities:
- 1710
- Gaps:
- 2975
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTGGGCTGGGGGGAGGCGGTGGCGGCTGAGGGAAGGAGGAGGATAAGGAGGAGGAACGAGGCCAGCAGGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACGGCAGCGACGGGGCCGGGGTGATGGTGCAGGTGCCTGGGGTCGGTGCGGAGCTGCCGGGCTGAGGGACGCC 148
Query 1 -----------------------------------------------------ATGCTGAGCAGGTTGATGAGC 21
|||||||||||||||||||||
Sbjct 149 TGGTCCAGGGTCCGCAGCGCCGCCGCGTCGCTCCCGGGCGGGCGGGCGGGAAGATGCTGAGCAGGTTGATGAGC 222
Query 22 GGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGACGACAGCGAGTACACCTGCAC 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGACGACAGCGAGTACACCTGCAC 296
Query 96 CATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATCTGAACCTACTTGAGAAAGACT 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATCTGAACCTACTTGAGAAAGACT 370
Query 170 ATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTTACAAAGTCTGTGGTGAAACAA 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTTACAAAGTCTGTGGTGAAACAA 444
Query 244 TTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTGAAAGA 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTGAAAGA 518
Query 318 AGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACAT 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACAT 592
Query 392 CGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACCCTGAA 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACCCTGAA 666
Query 466 GGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGGAAAATTGCTGAGATTCACAA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGGAAAATTGCTGAGATTCACAA 740
Query 540 GACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAGAAAAGCACAGACATTGGAAACAT 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAGAAAAGCACAGACATTGGAAACAT 814
Query 614 ATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTT 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTT 888
Query 688 GTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAA 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAA 962
Query 762 GACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTACATATTTTGCTCCAACTCCTGAAG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAAAATTATTCTTACATATTTTGCTCCAACTCCTGAAG 1036
Query 836 CGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGC 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGC 1110
Query 910 ACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGTGGCCGAGTTGCAAAGGAAGTCAT 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGGTTCCGATACAGTGGCCGAGTTGCAAAGGAAGTCAT 1184
Query 984 GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTC 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTC 1258
Query 1058 CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATG 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATG 1332
Query 1132 GAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT 1406
Query 1206 GCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTG 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTG 1480
Query 1280 CAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGA 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGA 1554
Query 1354 GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGG 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGG 1628
Query 1428 GGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAGGTGAATAAGTTTGTTCTAAGTG 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAGGTGAATAAGTTTGTTCTAAGTG 1702
Query 1502 TCCTCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTGTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCT 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCTCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTGTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCT 1776
Query 1576 GACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGAACAATTCCACTATCAATACTTTTG 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGAACAATTCCACTATCAATACTTTTG 1850
Query 1650 TCCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACC------------- 1710
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATGA 1924
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 1925 CTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAAC 1998
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 1999 CATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAGA 2072
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2073 AGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACTCATTTTCTTCAGAAGTTATTTCAAGAAAG 2146
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2147 GCTCAGCGACTCTGTTTCTCATCTTTCCAATTTGCAGGATAATTTTTGGTTTTGAATTTTGATTTTTCATAGAT 2220
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2221 GTATATTATTTTGAAGTATCAAATAAAAATAATTTATTTTACTATTACTGATTATTGCAGTAGTATCACCTAGC 2294
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2295 AGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCAC 2368
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2369 TGGGTTCCAGTAGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGGGATCTGGACAATGGGGACTGTTTAGTT 2442
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2443 TTTTGTTTGTTTTTTTTGCCAGCCAGAACTTTTAAAAAAGTAAACATCCATGTAGAATGATTAAATGGAAAGTT 2516
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2517 GCTTCTTATGATGGTCTGAGTTGGATTTTCTTTTCCTTTTGTTTTTTCAAATCTGAGCAGAGTGGGCATCTGAA 2590
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2591 GGGACCACCGCTACAGCAACAGCAGCATCAGGGGTGGGAAAATAGAGCCTGATGAACTAAACGATGCAAGAAAG 2664
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2665 AAACTGATCCTGAGAATGAAAAGCTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAA 2738
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2739 GAATCTTTTAAAATAGATTTCTAAGAGATGCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAG 2812
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2813 ATGTAGAAATGCTGCCCCCTAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGAA 2886
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2887 GTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCTAAAA 2960
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2961 CCAATCACACACAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGGCTTATTTA 3034
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3035 AGGGTGGTCAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCC 3108
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3109 AAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTCCCCCGAGATGGTAGAACCATGTC 3182
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3183 CATGTTTACAATATGACAACTGTGGAATAATTGGGGTTCTTAGGGAGAGATTTGCATAATTTTAAAGACATCCT 3256
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3257 TTCATCTGGACCAGAGGTCAATCAACTTATGTCAAGTGCTACACAGTAAATATTTTGGTTTAGCACGCCATACT 3330
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3331 GTGTCACAACTGCTCAATTCTGCCATCACAGCACAAAAACAGCCACAGATAATTTGTAAATGAAGGAACATGGC 3404
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3405 TGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCTACAGGCCATAATACGCCAATCCTGCTCT 3478
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3479 AGACAATAAAACTGATCCTTACCAGTATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCCATGCCTGACATGT 3552
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3553 ATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTGTTTAAAGGGTGCTTGAACAACTAACCA 3626
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3627 GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCTGGAATCTAAGAAGG 3700
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3701 GAAGAGGGCTTCTCTGACCATTTTCATACCAGCAACAATTTAGGCAGAATTATAAACATCTATTTATCGAGTGA 3774
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3775 CAATACAAACCGAAGGAGATCCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAGCCACTGCCACTTGTCATC 3848
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3849 TACATAGCAAAGGCTTTATTTAGCACAGGACTAACGTGAAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGA 3922
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3923 CAGGGGGCTGGTGTCCACCTGGTATCTACTGTCTTATGCAACATAGAAGATTACCTTTTAGTGTAGTGCTCCTA 3996
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 3997 CCTCAGTTTGTAGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCATATTCACATTAG 4070
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4071 AGACAGATGCAGTATTCCATATCCTAGTATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCAT 4144
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4145 TTCTAACAGCTAAATTTTGCTCTGTAAACAGAAACTTTAGGGTTGTTTTTTTCCAGGGCTCATCCCAGAAAATA 4218
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4219 TGGATAGAAAAGTTTCCTTCAGTTTGCTTTTCAAATAGTGCTTGAATAATAAACCTCCTTTGATTGGTGACTAG 4292
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4293 TCTTTTTTGGTATATCTCCACCTTTAAAAATTGTTCAAGTTTTTAACCTGGTTATACTGTGTTCTAACATGTCT 4366
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4367 CTCATTTTCTCTCAAAATTAGTTTATCTCATTGTAGAAAAAGCAATGGTTTTCATAGCTTCATCTATCAGGAAA 4440
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4441 TAAAACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATGTGAATTTC 4514
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4515 TTAGATACATTTAAAAATATATAGTTGTTAACCTTCTGTGTGCCAAAAACTCTTAAGTTACATTTTCCTTCAAA 4588
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 4589 GCAATGTACTTTTTTCTACATATGCAGTATGTAGTTAGCATAAAATCATTGGTGCCATGAAGATTATTTTTAAA 4662
Query 1711 ----------------------- 1710
Sbjct 4663 CTTAAATAAATATTTAAATATCA 4685
