Nucleotide Global Alignment

Description

Query:
TRCN0000474083
Subject:
NR_135756.2
Aligned Length:
5733
Identities:
220
Gaps:
5492

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACTGCAATTCCTACCTCCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATT  1850

Query    1  ----------------------------------------------------------------ATG-----GG  5
                                                                            |||     ||
Sbjct 1851  TGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGG  1924

Query    6  GGGCGGAGTGAGCGGTGAACACAC--TGAACAGAA----------------TCTGA---------GAT----TT  48
            |||.|.|          |||||||  |||| |.||                |.|||         |||    ||
Sbjct 1925  GGGAGAA----------AACACACATTGAA-ATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTT  1987

Query   49  AATAAGCC--------AAA--------TCAACAATGTGGGAAG--TTC-----------------GTTTTGTTT  87
            .|||   |        |||        |||  .|||| |.|||  |||                 |||||.|||
Sbjct 1988  TATA---CTGACTTTGAAATATTTTTGTCA--CATGT-GAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTT  2055

Query   88  T-TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAG  160
            | ||.||.|||||||||||||||||||||||.|||||||||.||||||.||||..|||||||||||||||||||
Sbjct 2056  TGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAG  2129

Query  161  CTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCA  234
            |||||||||.|.||||||||||||||||||||||||||||.||.||||||||||||.|||||||||||||||||
Sbjct 2130  CTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCA  2203

Query  235  TGCCCGGCTAATTTTTTGTATTTT--------------------------------------------------  258
            .|||||||||||||||||||||||                                                  
Sbjct 2204  CGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTG  2277

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2278  ACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTA  2351

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2352  CTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTT  2425

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2426  CATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTC  2499

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2500  CAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACT  2573

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2574  CTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTT  2647

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2648  CATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTG  2721

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2722  AATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGA  2795

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2796  GGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTG  2869

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2870  ACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGG  2943

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2944  CAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCT  3017

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3018  ATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCAT  3091

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3092  CCTTTGGAATAATTGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACT  3165

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3166  TCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTC  3239

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3240  TATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCAT  3313

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3314  TGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCT  3387

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3388  CTACCTATTATGAACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCT  3461

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3462  TAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATT  3535

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3536  ATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGA  3609

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3610  GAAAATTTGCCTACATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATA  3683

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3684  TATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTG  3757

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3758  AGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTT  3831

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3832  TAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTA  3905

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3906  CCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGA  3979

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3980  AATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCA  4053

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4054  AAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACC  4127

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4128  CTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTC  4201

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4202  CAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAG  4275

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4276  TCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAA  4349

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4350  CTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTG  4423

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4424  AATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAA  4497

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4498  CATTTTTATTAAGATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTT  4571

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4572  GAGATGTAAATTCATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTA  4645

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4646  CCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTA  4719

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4720  CATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTG  4793

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4794  AAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGG  4867

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4868  CCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACT  4941

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4942  AAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAG  5015

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5016  AATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGA  5089

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5090  GCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCAT  5163

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5164  CAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTC  5237

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5238  TCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGAC  5311

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5312  AGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAA  5385

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5386  GAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATAT  5459

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5460  CAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCC  5533

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5534  AGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCC  5607

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5608  TCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTA  5681

Query  259  -----------------------------------  258
                                               
Sbjct 5682  TTTATTCAAGAGAAATGGCTGAATCTCGATACGAA  5716

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