Nucleotide Global Alignment
Description
- Query:
- TRCN0000474083
- Subject:
- NR_135756.2
- Aligned Length:
- 5733
- Identities:
- 220
- Gaps:
- 5492
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTGCAATTCCTACCTCCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATT 1850
Query 1 ----------------------------------------------------------------ATG-----GG 5
||| ||
Sbjct 1851 TGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGG 1924
Query 6 GGGCGGAGTGAGCGGTGAACACAC--TGAACAGAA----------------TCTGA---------GAT----TT 48
|||.|.| ||||||| |||| |.|| |.||| ||| ||
Sbjct 1925 GGGAGAA----------AACACACATTGAA-ATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTT 1987
Query 49 AATAAGCC--------AAA--------TCAACAATGTGGGAAG--TTC-----------------GTTTTGTTT 87
.||| | ||| ||| .|||| |.||| ||| |||||.|||
Sbjct 1988 TATA---CTGACTTTGAAATATTTTTGTCA--CATGT-GAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTT 2055
Query 88 T-TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAG 160
| ||.||.|||||||||||||||||||||||.|||||||||.||||||.||||..|||||||||||||||||||
Sbjct 2056 TGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAG 2129
Query 161 CTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCA 234
|||||||||.|.||||||||||||||||||||||||||||.||.||||||||||||.|||||||||||||||||
Sbjct 2130 CTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCA 2203
Query 235 TGCCCGGCTAATTTTTTGTATTTT-------------------------------------------------- 258
.|||||||||||||||||||||||
Sbjct 2204 CGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTG 2277
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2278 ACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTA 2351
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2352 CTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTT 2425
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2426 CATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTC 2499
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2500 CAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACT 2573
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2574 CTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTT 2647
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2648 CATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTG 2721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2722 AATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGA 2795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2796 GGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTG 2869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2870 ACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGG 2943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2944 CAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCT 3017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3018 ATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCAT 3091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3092 CCTTTGGAATAATTGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACT 3165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3166 TCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTC 3239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3240 TATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCAT 3313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3314 TGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCT 3387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3388 CTACCTATTATGAACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCT 3461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3462 TAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATT 3535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3536 ATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGA 3609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3610 GAAAATTTGCCTACATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATA 3683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3684 TATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTG 3757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3758 AGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTT 3831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3832 TAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTA 3905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3906 CCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGA 3979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3980 AATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCA 4053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4054 AAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACC 4127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4128 CTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTC 4201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4202 CAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAG 4275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4276 TCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAA 4349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4350 CTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTG 4423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4424 AATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAA 4497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4498 CATTTTTATTAAGATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTT 4571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4572 GAGATGTAAATTCATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTA 4645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4646 CCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTA 4719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4720 CATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTG 4793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4794 AAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGG 4867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4868 CCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACT 4941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4942 AAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAG 5015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5016 AATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGA 5089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5090 GCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCAT 5163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5164 CAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTC 5237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5238 TCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGAC 5311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5312 AGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAA 5385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5386 GAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATAT 5459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5460 CAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCC 5533
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5534 AGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCC 5607
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5608 TCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTA 5681
Query 259 ----------------------------------- 258
Sbjct 5682 TTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 5716
