Nucleotide Global Alignment
Description
- Query:
- TRCN0000474083
- Subject:
- XR_001744515.1
- Aligned Length:
- 5880
- Identities:
- 222
- Gaps:
- 5637
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCCGGCCTTCCATCCCAGTTTCTTCTAGGAATTCGGAGCCTCCCCTGCAGCGACTCGGAAGATTCGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGGGGGACAAGTCGGCGCCCCAGAGCGGACGAGTCACCAGGTGTCAAGATGCTGCAAGTACATAGGACTGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGGCAGGCTGGGGGTCAGCCTCTCCAAGGGTCTTCACCACAAAGCTGTGTTGGCCGTCCGGAGGGAGGATGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAACGCCTGGGAGAGAAGGGCCCCGCTAGCTCCCAAGCACATCAAAGGCATCACCAATCTGGGATACAAGGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATACAGCCTTCGAATCGGCGGGCCATTCATGATAAGGACTATGTCAAAGCTGGTGGCATTCTTCAGGAGGAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTCTGAAGCTTGTCTAATTTTAGGAGTTAAAAGACCTCCAGAGGAAAAATTAATGTCCAGGAAGACTTATGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTTTCTCCCACACAATAAAAGCTCAGGAGGCCAATATGGGCTTGTTGGATGAGATTCTAAAACAGGAAATTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTTATTGATTATGAGAAAATGGTGGATCATAGAGGAGTACGGGTAGTGGCATTTGGACAGTGGGCTGGTGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAGGAATGATCAACATTTTACATGGAATGGGTTTAAGGCTCCTTGCTTTGGGACATCACACACCTTTTATGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTGGCATGGCTCATAACTACAGGAATAGCAGTCAGGCTGTGCAAGCTGTCCGTGATGCTGGCTATGAAATAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGGGTTTGATGCCTAAGTCAATAGGACCCTTAACATTTGTGTTCACAGGAACTGGTAATGTTTCTAAGGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCCAAGCAATCTTTAATGAGCTACCTTGTGAATATGTGGAGCCCCATGAATTAAAAGAAGTTTCCCAAACTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGACCTCAGAAAAGTGTATGGGACGGTGTTAAGTCGTCATCATCATCTTGTCAGGAAAACAGATGCTGTGTATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCCTGCAGAGTATGACAAACATCCGGAGCGCTACATAAGTCGTTTTAATACTGATATTGCACCCTATACAACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTTAATTAATGGAATCTACTGGGAACAAAACACTCCTCGCCTCCTAACCCGCCAAGATGCTCAGAGTCTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCTCCGGGCAAGTTCTCACCTGCTGGTGTGGAAGGCTGCCCTGCATTACCACACAAACTCGTGGCAATATGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATTTCAGCTGACACAGGAGGGTCTATAGAGTTTATGACTGAGTGTACAACAATAGAGCATCCCTTTTGCATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATGATGCAGACCAGCATATTATTCATGACAGTGTTGAAGGCTCGGGGATCCTGATGTGTTCCATTGACAATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCGGCACAGCTCCCAATTGAAGCTACAGAATGCTTTGGAGACATGCTTTACCCTTATGTTGAAGAAATGATAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATCAGACGCGACACAGCCTCTTGAAAGTCAGAATTTTTCTCCTGTGGTGAGAGATGCAGTGATTACATCCAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGTACATTACCTGATAAATATAAATATATCCAGACACTCCGGGAGAGCAGGGAACGTGCTCAGTCACTTTCAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCACCAGGAGAAAGGTTTTGGTTCTTGGATCTGGCTACATATCTGAGCCTGTATTAGAATATTTATCAAGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCAATATAGAAATAACAGTAGGATCTGACATGAAGAATCAAATTGAACAGTTAGGCAAGAAATATAATATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATCCTGTTAGCATGGACATTTGTAAACAAGAAGAGAAGCTGGGCTTCTTGGTGGCAAAACAGGATCTTGTCAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGCTTGTTGCCTTATGTATTGCACCCTCTTGTGGCCAAGGCCTGCATCACAAACAAAGTTAACATGGTCACTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAGCTACATCACACCAGCACTAAAAGAATTGGAAAAGAGTGTGGAAGATGCTGGCATCACAATCATTGGTGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGGGATTGGACCCTGGTCTGGATCACATGTTAGCAATGGAAACAATAGATAAAGCCAAGGAAGTGGGAGCCAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATTGAATCATATATTTCCTACTGTGGTGGGCTTCCAGCCCCTGAACATTCAAACAATCCATTGAGATATAAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAGCTGGAGTCCAGTGGGAGTTTTGATGAATGTAATGCAGTCTGCCACCTATCTGCTCGATGGAAAGGTTGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATGTTGCAGGAGGCATCTCCTTTCTTGATGCCGTTACGTCCATGGATTTTTTTCCAGGATTAAATTTGGAAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTATCCTAACAGAGACAGTACGAAATATGCTGAGATTTATGGCATTTCTTCTGCTCACACTTTGTTGCGGGGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACTGAGATATAAGGGATTGGAATGCTGAATAATGGATTGGAATGTTGAATAATGTTGAATACCTTCCTATGGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATCCTCCCTAACTCCTTCCCCTTGAACCACCCAGCCCCATCTATGGATATATGAAAGCTTTGAATGGATTTGTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAATTAGGTCTTATAAACAGAGAAGCGCTTCCTGCCTTTAGACCTGAGGCCAACCCTCTCACCTGGAAACAACT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTCTGTGACCTAGTTGGGATTTCACCCTCCTCTGAGCATGATGTGTTGAAGGAAGCTGTTCTTAAGAAACTAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGAGACAATACCCAGTTGGAGGCTGCTGAATGGTCCTGAAGAAAAAGATATGATTGTGATGAGAGACAGCTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGAATCAGACATCCTTCTGGACATTTAGAACATAAAACGATTGATCTTGTGGCTTATGGGGACATCAATGGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTCAGCCATGGCTAAAACCGTGGGGTTACCCACCGCCATGGCAGCCAAAATGTTGCTTGATGGTGAAATTGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCAAAGGCCTAATGGGGCCCTTTTCAAAGGAGATCTATGGACCAATATTGGAGCGAATTAAAGCAGAAGGCAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TATATATACTACACAGAGTACAATTAAACCATAATTGGGAATTATATTTTGTTTTTTTCTTCCCAGGCAATACA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTCTGAACATGTGTGTGATAAATGGGTTTGCTAATGTGCTGTTTTAAAGTATAAAGCATAATATGTTTTGGTT 3034
Query 1 ----------------------------------------ATGG--------GGGGC-GGAG-TG--AGCGGTG 22
|||| ||..| |||| || |||
Sbjct 3035 AACACAATGTACTTTTTGAACTATAAATCTTTATTTTAATATGGAAATGTTTGGAACAGGAGATGCAAGC---- 3104
Query 23 AACACACTGAACAGAATCTGAGATTTAATAAGCCAA-----------ATCAACA---ATGTGGGAAG------- 75
|||| |||||| ||..||||||||..|.| ||.||.| |||| |.|||
Sbjct 3105 ----CACT-AACAGA----GAACTTTAATAATTCTACCCTGTATTTTATAAATACGTATGT-GAAAGTGATGAT 3168
Query 76 ---------------------------------TTCGTTTTGTTTTTT--------------TTTTTTGAGACG 102
||| ||||||||||| ||||||||||.|
Sbjct 3169 CATGCTATTTGTTAATTTATTGTGCCACTTTTTTTC-TTTTGTTTTTTTTTTGTTGTTGTTGTTTTTTGAGATG 3241
Query 103 GAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTT 176
|||||||||||||||||||||||||.||||||.||||.|||||||||||||||||||||||||||||...||||
Sbjct 3242 GAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTT 3315
Query 177 CACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCT-AATTTT 249
||||||||||||||||||||||||.||.|||||||||||||||||||.||||||||||.|||||||| ||||||
Sbjct 3316 CACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCGGCTAAATTTT 3389
Query 250 TTGTATTTT----------------------------------------------------------------- 258
|||||||||
Sbjct 3390 TTGTATTTTTCAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGTCCACTTTTTTCTTAAATGAACATATTG 3463
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3464 TCTTATAACCAGCAAATGAAGTTTTACTTTTTTAGTCAGAAAAAATTTCGTCATAAAGCTATATTTTTATATTT 3537
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3538 TTAAAATTGATACAGTTAGATACCTTCAGATTACCTAAGTTAAGTTTTTGCCAAAATGCTATTTTATGCCCTTT 3611
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3612 TTGTAAAGTTATGATTTATTTTGTAAATATAGTTCCTTATAGTTTTCTCTTGAGTGTTTGGACATGAGAATAGA 3685
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3686 TAAGATTAAATTACAATTTACAAGATCACTTCATTAGGCACAGGAAAAGTATTTAACAAAATTCAACACCCTTT 3759
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3760 CACAATAAAAAATAAAAAATAAAAAACCCTCAACAAACTAGGAATAGAAGGAAACTTCCTCAACCTGATAAAGG 3833
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3834 GCATCTATGAAGAACCCATGGTTAGCATCATACTTAATGGTGAAGGACTGGATTATTTCCCCCTGAGATCAGAA 3907
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3908 ACAAGACAAGGATGTCTGCTTTGGCCATTTCTATTCAACTTGTACTGGACAGTCAAGAAAGGGCAATTAGGCAA 3981
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3982 GAAAATAAAATAAAAGTCATCTAGGTTGGAAAGGAAGAAGTATAACTAAATAGAGATGGGAGACGATATGGTGG 4055
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4056 TTTTGTGCATAGTAATCCAAGGGAAAACTATAGAAAATCCAAAGGCATGATTTATTAATAAATAAATTCAGCAA 4129
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4130 AGTTACAGGATACAGGATTAAATATGCAGAAATTGGTTATCTTTCAATATAGTATCAATGAATAAATCAAAAAT 4203
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4204 GATGTTAAGAAAACAATTTAATTTTCAACAATGGTCAAGCTTGGTGGCTTGTGCCTGTAATCCCAACACTTTGG 4277
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4278 GAGTCTGAGGCAGAAAGACTGCTAGAGGCCAGGAGACCAGCCTGGGAAACAGTGAGATCCCATCTCTACAAAAA 4351
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4352 CAAACAAACAAAAAACAACAAGCAAACAAAAAACAGCTGGATGTGATGACACTCATCTGTCGTCTCAGCTACTC 4425
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4426 AGAGGCTGAGGTGTAAGGATGGCTTGAGCCCCAAAGTTCGAAGCTGCAATGAGCTATAACTGGGTCACTGCAAT 4499
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4500 CCAGCCTGGATGACAGAGTTAGACCTTGACTCAAAAAAAACAAAAAAGAAAAGAAAAAAATTGACAGCATCAGA 4573
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4574 AAGAGTAAAATACCAATATAATTGAGGGTCCAGAAATATTGATCACATTTATCATCAACTGACTTTTGAAAATA 4647
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4648 GTGCTAAGACAATTCAATGGGGGCAAAATAGTCTTTTTCATTAAATGATGCTTGGAAACATGGATATCCACATG 4721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4722 CAAAATAATGAAATTGGACTCCTACCTCATATTGCATATAAAAATTAACTCAAAGTTGACCTAAGATCTAAATG 4795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4796 TAAGAGCTAATATTGTAAGTATCTTCAAAGAAAACATGGCGTAAATCTTTCTGACTTTGAATTAGGCAATGATT 4869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4870 TCTTAAATAAATGACACTAAAAACACAAGCAACAAAAGAAGAAAATAGGTAAATTAAAATTAAAACCATTTGTG 4943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4944 TTTCCAAGGACAATATCAAGAAAGCAAAAATACAACCCACAGAATGAGATAATTTTTTTTAAAATCATGTATTA 5017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5018 GTTAAGGGAGGAATTTGTATTTAGAATATGTAAAGAACTGTTACAATAATAATTAAAAGGCATATAATTCAATT 5091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5092 TTTAAAAATCAACAAGAGATCTGAATTAACAGTTCTCCAAAGAAGATACACAAAAGGCCAATAAGCACATGAAA 5165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5166 AGGTTCTCAACATCACTAGCCATCAGGGAAATGCAAATGAGATCTACAATGAGATATCACTTAACACTCACTGG 5239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5240 AATAGATATATAATCAAAGTGATAATATCAAGTGTTGGTGAGGATGCAGAGAAATTGGAACCCTCATGCACTGT 5313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5314 TGGTGGATACCCACGTGATATAAAAACAAATGTCTACACAAAAACTTGTGCACAGATGTTCTTTGCAGCATTAT 5387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5388 TTATAATAGCCCAAAATTGAAACAGCCCTAATTTCTATCAACTAACAAGTGAATAAACAAAACGTGGCATATCC 5461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5462 ATACAAGGAATATTATTCAGCAATAAAAAAAGAGATGAAGTACTGATATGCACCACAACATGGAAAAACCTTGA 5535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5536 AAACATATCAAGTGAAGAATGCCAGACATGAAAGGCCACATATTATATGATTTCATTTATATGAAATGTCCAGA 5609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5610 ACAGGCGAATATATATAGAGAGAAGGCAGATTAGTGGTTGCTTAGGCTGAAGGGTTGGGGAGGACAAAGGGGTG 5683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5684 ACTGCTAATTAGTATGGGGTTTCTTTTTTGGGGTGATGTAAACGTTGTAAAGTTGATTGTGGTAATGGTGGCAC 5757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5758 AACTCTGAATATACTAAAAACCACTGAATTGTATACTTTGAATGTTTGAACTGTGTGGTATGTAGATTTTATCT 5831
Query 259 ---------------------------------- 258
Sbjct 5832 CAAGTTGTTATAAAAAATTAAATTACAAATGCAA 5865
