Nucleotide Global Alignment

Description

Query:
TRCN0000474083
Subject:
XR_001744519.1
Aligned Length:
5797
Identities:
222
Gaps:
5554

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTCCCGGCCTTCCATCCCAGTTTCTTCTAGGAATTCGGAGCCTCCCCTGCAGCGACTCGGAAGATTCGAGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCGGGGGACAAGTCGGCGCCCCAGAGCGGACGAGTCACCAGGTGTCAAGATGCTGCAAGTACATAGGACTGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGGCAGGCTGGGGGTCAGCCTCTCCAAGGGTCTTCACCACAAAGCTGTGTTGGCCGTCCGGAGGGAGGATGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAACGCCTGGGAGAGAAGGGCCCCGCTAGCTCCCAAGCACATCAAAGGCATCACCAATCTGGGATACAAGGTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGATACAGCCTTCGAATCGGCGGGCCATTCATGATAAGGACTATGTCAAAGCTGGTGGCATTCTTCAGGAGGAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTCTGAAGCTTGTCTAATTTTAGGAGTTAAAAGACCTCCAGAGGAAAAATTAATGTCCAGGAAGACTTATGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTTTTCTCCCACACAATAAAAGCTCAGGAGGCCAATATGGGCTTGTTGGATGAGATTCTAAAACAGGAAATTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCTTATTGATTATGAGAAAATGGTGGATCATAGAGGAGTACGGGTAGTGGCATTTGGACAGTGGGCTGGTGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCAGGAATGATCAACATTTTACATGGAATGGGTTTAAGGCTCCTTGCTTTGGGACATCACACACCTTTTATGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CATTGGCATGGCTCATAACTACAGGAATAGCAGTCAGGCTGTGCAAGCTGTCCGTGATGCTGGCTATGAAATAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTGGGTTTGATGCCTAAGTCAATAGGACCCTTAACATTTGTGTTCACAGGAACTGGTAATGTTTCTAAGGGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCCAAGCAATCTTTAATGAGCTACCTTGTGAATATGTGGAGCCCCATGAATTAAAAGAAGTTTCCCAAACTGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGACCTCAGAAAAGTGTATGGGACGGTGTTAAGTCGTCATCATCATCTTGTCAGGAAAACAGATGCTGTGTATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATCCTGCAGAGTATGACAAACATCCGGAGCGCTACATAAGTCGTTTTAATACTGATATTGCACCCTATACAACT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGCTTAATTAATGGAATCTACTGGGAACAAAACACTCCTCGCCTCCTAACCCGCCAAGATGCTCAGAGTCTCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCTCCGGGCAAGTTCTCACCTGCTGGTGTGGAAGGCTGCCCTGCATTACCACACAAACTCGTGGCAATATGTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACATTTCAGCTGACACAGGAGGGTCTATAGAGTTTATGACTGAGTGTACAACAATAGAGCATCCCTTTTGCATG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TATGATGCAGACCAGCATATTATTCATGACAGTGTTGAAGGCTCGGGGATCCTGATGTGTTCCATTGACAATTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCCGGCACAGCTCCCAATTGAAGCTACAGAATGCTTTGGAGACATGCTTTACCCTTATGTTGAAGAAATGATAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TATCAGACGCGACACAGCCTCTTGAAAGTCAGAATTTTTCTCCTGTGGTGAGAGATGGAACGTGCTCAGTCACT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTCAATGGGCACCAGGAGAAAGGTTTTGGTTCTTGGATCTGGCTACATATCTGAGCCTGTATTAGAATATTTAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAAGAGATGGCAATATAGAAATAACAGTAGGATCTGACATGAAGAATCAAATTGAACAGTTAGGCAAGAAATAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AATATTAATCCTGTTAGCATGGACATTTGTAAACAAGAAGAGAAGCTGGGCTTCTTGGTGGCAAAACAGGATCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGTCATCAGCTTGTTGCCTTATGTATTGCACCCTCTTGTGGCCAAGGCCTGCATCACAAACAAAGTTAACATGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCACTGCAAGCTACATCACACCAGCACTAAAAGAATTGGAAAAGAGTGTGGAAGATGCTGGCATCACAATCATT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGTGAATTGGGATTGGACCCTGGTCTGGATCACATGTTAGCAATGGAAACAATAGATAAAGCCAAGGAAGTGGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGCCACGATTGAATCATATATTTCCTACTGTGGTGGGCTTCCAGCCCCTGAACATTCAAACAATCCATTGAGAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATAAATTTAGCTGGAGTCCAGTGGGAGTTTTGATGAATGTAATGCAGTCTGCCACCTATCTGCTCGATGGAAAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTTGTGAATGTTGCAGGAGGCATCTCCTTTCTTGATGCCGTTACGTCCATGGATTTTTTTCCAGGATTAAATTT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GGAAGGCTATCCTAACAGAGACAGTACGAAATATGCTGAGATTTATGGCATTTCTTCTGCTCACACTTTGTTGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGGGGACACTGAGATATAAGGGATATATGAAAGCTTTGAATGGATTTGTAAAATTAGGTCTTATAAACAGAGAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCGCTTCCTGCCTTTAGACCTGAGGCCAACCCTCTCACCTGGAAACAACTCCTCTGTGACCTAGTTGGGATTTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACCCTCCTCTGAGCATGATGTGTTGAAGGAAGCTGTTCTTAAGAAACTAGGAGGAGACAATACCCAGTTGGAGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTGCTGAATGGTTGGGCTTACTTGGGGATGAACAAGTTCCTCAGGCAGAGTCCATTCTGGATGCCCTCTCCAAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CATTTGGTCATGAAGCTTTCCTATGGTCCTGAAGAAAAAGATATGATTGTGATGAGAGACAGCTTTGGAATCAG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ACATCCTTCTGGACATTTAGAACATAAAACGATTGATCTTGTGGCTTATGGGGACATCAATGGCTTTTCAGCCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGGCTAAAACCGTGGGGTTACCCACCGCCATGGCAGCCAAAATGTTGCTTGATGGTGAAATTGGAGCCAAAGGC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTAATGGGGCCCTTTTCAAAGGAGATCTATGGACCAATATTGGAGCGAATTAAAGCAGAAGGCATTATATATAC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TACACAGAGTACAATTAAACCATAATTGGGAATTATATTTTGTTTTTTTCTTCCCAGGCAATACACCTCTGAAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATGTGTGTGATAAATGGGTTTGCTAATGTGCTGTTTTAAAGTATAAAGCATAATATGTTTTGGTTAACACAATG  2960

Query    1  -------------------------------ATGG--------GGGGC-GGAG-TG--AGCGGTGAACACACTG  31
                                           ||||        ||..| |||| ||  |||        |||| 
Sbjct 2961  TACTTTTTGAACTATAAATCTTTATTTTAATATGGAAATGTTTGGAACAGGAGATGCAAGC--------CACT-  3025

Query   32  AACAGAATCTGAGATTTAATAAGCCAA-----------ATCAACA---ATGTGGGAAG----------------  75
            ||||||    ||..||||||||..|.|           ||.||.|   |||| |.|||                
Sbjct 3026  AACAGA----GAACTTTAATAATTCTACCCTGTATTTTATAAATACGTATGT-GAAAGTGATGATCATGCTATT  3094

Query   76  ------------------------TTCGTTTTGTTTTTT--------------TTTTTTGAGACGGAGTCTCGC  111
                                    ||| |||||||||||              ||||||||||.||||||||||
Sbjct 3095  TGTTAATTTATTGTGCCACTTTTTTTC-TTTTGTTTTTTTTTTGTTGTTGTTGTTTTTTGAGATGGAGTCTCGC  3167

Query  112  TCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATT  185
            ||||||||||||||||.||||||.||||.|||||||||||||||||||||||||||||...|||||||||||||
Sbjct 3168  TCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATT  3241

Query  186  CTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCT-AATTTTTTGTATTTT  258
            |||||||||||||||.||.|||||||||||||||||||.||||||||||.|||||||| |||||||||||||||
Sbjct 3242  CTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCGGCTAAATTTTTTGTATTTT  3315

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3316  TCAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGTCCACTTTTTTCTTAAATGAACATATTGTCTTATAAC  3389

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3390  CAGCAAATGAAGTTTTACTTTTTTAGTCAGAAAAAATTTCGTCATAAAGCTATATTTTTATATTTTTAAAATTG  3463

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3464  ATACAGTTAGATACCTTCAGATTACCTAAGTTAAGTTTTTGCCAAAATGCTATTTTATGCCCTTTTTGTAAAGT  3537

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3538  TATGATTTATTTTGTAAATATAGTTCCTTATAGTTTTCTCTTGAGTGTTTGGACATGAGAATAGATAAGATTAA  3611

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3612  ATTACAATTTACAAGATCACTTCATTAGGCACAGGAAAAGTATTTAACAAAATTCAACACCCTTTCACAATAAA  3685

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3686  AAATAAAAAATAAAAAACCCTCAACAAACTAGGAATAGAAGGAAACTTCCTCAACCTGATAAAGGGCATCTATG  3759

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3760  AAGAACCCATGGTTAGCATCATACTTAATGGTGAAGGACTGGATTATTTCCCCCTGAGATCAGAAACAAGACAA  3833

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3834  GGATGTCTGCTTTGGCCATTTCTATTCAACTTGTACTGGACAGTCAAGAAAGGGCAATTAGGCAAGAAAATAAA  3907

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3908  ATAAAAGTCATCTAGGTTGGAAAGGAAGAAGTATAACTAAATAGAGATGGGAGACGATATGGTGGTTTTGTGCA  3981

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3982  TAGTAATCCAAGGGAAAACTATAGAAAATCCAAAGGCATGATTTATTAATAAATAAATTCAGCAAAGTTACAGG  4055

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4056  ATACAGGATTAAATATGCAGAAATTGGTTATCTTTCAATATAGTATCAATGAATAAATCAAAAATGATGTTAAG  4129

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4130  AAAACAATTTAATTTTCAACAATGGTCAAGCTTGGTGGCTTGTGCCTGTAATCCCAACACTTTGGGAGTCTGAG  4203

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4204  GCAGAAAGACTGCTAGAGGCCAGGAGACCAGCCTGGGAAACAGTGAGATCCCATCTCTACAAAAACAAACAAAC  4277

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4278  AAAAAACAACAAGCAAACAAAAAACAGCTGGATGTGATGACACTCATCTGTCGTCTCAGCTACTCAGAGGCTGA  4351

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4352  GGTGTAAGGATGGCTTGAGCCCCAAAGTTCGAAGCTGCAATGAGCTATAACTGGGTCACTGCAATCCAGCCTGG  4425

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4426  ATGACAGAGTTAGACCTTGACTCAAAAAAAACAAAAAAGAAAAGAAAAAAATTGACAGCATCAGAAAGAGTAAA  4499

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4500  ATACCAATATAATTGAGGGTCCAGAAATATTGATCACATTTATCATCAACTGACTTTTGAAAATAGTGCTAAGA  4573

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4574  CAATTCAATGGGGGCAAAATAGTCTTTTTCATTAAATGATGCTTGGAAACATGGATATCCACATGCAAAATAAT  4647

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4648  GAAATTGGACTCCTACCTCATATTGCATATAAAAATTAACTCAAAGTTGACCTAAGATCTAAATGTAAGAGCTA  4721

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4722  ATATTGTAAGTATCTTCAAAGAAAACATGGCGTAAATCTTTCTGACTTTGAATTAGGCAATGATTTCTTAAATA  4795

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4796  AATGACACTAAAAACACAAGCAACAAAAGAAGAAAATAGGTAAATTAAAATTAAAACCATTTGTGTTTCCAAGG  4869

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4870  ACAATATCAAGAAAGCAAAAATACAACCCACAGAATGAGATAATTTTTTTTAAAATCATGTATTAGTTAAGGGA  4943

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4944  GGAATTTGTATTTAGAATATGTAAAGAACTGTTACAATAATAATTAAAAGGCATATAATTCAATTTTTAAAAAT  5017

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5018  CAACAAGAGATCTGAATTAACAGTTCTCCAAAGAAGATACACAAAAGGCCAATAAGCACATGAAAAGGTTCTCA  5091

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5092  ACATCACTAGCCATCAGGGAAATGCAAATGAGATCTACAATGAGATATCACTTAACACTCACTGGAATAGATAT  5165

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5166  ATAATCAAAGTGATAATATCAAGTGTTGGTGAGGATGCAGAGAAATTGGAACCCTCATGCACTGTTGGTGGATA  5239

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5240  CCCACGTGATATAAAAACAAATGTCTACACAAAAACTTGTGCACAGATGTTCTTTGCAGCATTATTTATAATAG  5313

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5314  CCCAAAATTGAAACAGCCCTAATTTCTATCAACTAACAAGTGAATAAACAAAACGTGGCATATCCATACAAGGA  5387

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5388  ATATTATTCAGCAATAAAAAAAGAGATGAAGTACTGATATGCACCACAACATGGAAAAACCTTGAAAACATATC  5461

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5462  AAGTGAAGAATGCCAGACATGAAAGGCCACATATTATATGATTTCATTTATATGAAATGTCCAGAACAGGCGAA  5535

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5536  TATATATAGAGAGAAGGCAGATTAGTGGTTGCTTAGGCTGAAGGGTTGGGGAGGACAAAGGGGTGACTGCTAAT  5609

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5610  TAGTATGGGGTTTCTTTTTTGGGGTGATGTAAACGTTGTAAAGTTGATTGTGGTAATGGTGGCACAACTCTGAA  5683

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5684  TATACTAAAAACCACTGAATTGTATACTTTGAATGTTTGAACTGTGTGGTATGTAGATTTTATCTCAAGTTGTT  5757

Query  259  -------------------------  258
                                     
Sbjct 5758  ATAAAAAATTAAATTACAAATGCAA  5782

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