Nucleotide Global Alignment

Description

Query:
TRCN0000474103
Subject:
XM_024451694.1
Aligned Length:
1884
Identities:
1415
Gaps:
270

Alignment

Query    1  ATGATTTCACCTTCACTTGAACTGCTTCATTCAG-GACTCTGCAAATTCCCTGAAGTAGAAGGAAAAATGACCA  73
            |||||              ||           || ||   .|||||.|.|.||.|.|          .||    
Sbjct    1  ATGAT--------------AA-----------AGAGA---AGCAAAGTACTTGTATT----------CTG----  32

Query   74  CATTCAAA----------GAGGCAGTGACATTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCT  137
              ||||||          |||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct   33  --TTCAAAGATTATGGAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCT  104

Query  138  GCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTAGAGAACTTCAGGAACCTGCTCTCAGTAGGGA  211
            ||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||.
Sbjct  105  GCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGC  178

Query  212  ATCAACCATTCCACCAAGATACTTTCCACTT-CTTAGGGAAGGAAAAGTTTTGGAAGATGAAGACAACAAGCCA  284
            |||||||.||||||||||||||||.|||||| ||.|||||| |||||||||||||.||||..||||.|||.|||
Sbjct  179  ATCAACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAA-GAAAAGTTTTGGATGATGGGGACAGCAACCCA  251

Query  285  AAGAGAAGGGAATTCAGGAGGCAAGATCCAAATTGAGATGGAGACTGTTCCAGAAGCAGGACCACATGAAGAGT  358
            ||||||||||||||||||||||||||||||||.||||.|||||.|||||||||||||||||.||||||||||||
Sbjct  252  AAGAGAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGT  325

Query  359  GGTCCTGTCAGCAAATATGGGAACAAATTGCAAGTGACCTAACCAGGTCTCAAAACTCCATAAGGAACAGCTCT  432
            |||||||.||||||||.||||||||||||||||..|||.|||||||||||||..||||.||.|..||.|.||||
Sbjct  326  GGTCCTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCT  399

Query  433  CAGTTCTTCAAAGAAGGTGATGTCCCCTGCCAGATTGAGGCAAGACTATCTATAAGTCACGTGCA--ACAGAAA  504
            ||||||||..||.|.|||||||||||||.||||.||||.|||.|||||.|.|.||.|||  |.||  |||||||
Sbjct  400  CAGTTCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCA--TACAGGACAGAAA  471

Query  505  CCTTACC---GTTGTAATGAA-TGTAAACAGTCCATCAGTGATGTTTCTGTCTTTGATCTTCATCAACAATCAC  574
            ||||.||   ||.|    ||| ||||||||||||||||||||||||.|..||||||||||||.|||.||.|.|.
Sbjct  472  CCTTCCCAGGGTGG----GAAGTGTAAACAGTCCATCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTAT  541

Query  575  ACTCAGGAGAGAAATCTCATACATGTGGTGAGTGTGGAAAAAGCTTCTGTTACAGCCCAGCCCTTCATATTCAT  648
            ||||||.||||||.|||.|||||||||.||||||||||||||||.|||||||||.|.||||.||||||.|||||
Sbjct  542  ACTCAGAAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCAT  615

Query  649  CAGAGAGTCCATATGGGAGAAAAATGCTATAAGTGTGATGTGTGTGGTAAGGAATTTAATCAGAGCTCACATCT  722
            |||||||||||..|||||||.|||..||.||.|||||||||||||||.||||||||||.|||.|||||||||||
Sbjct  616  CAGAGAGTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCT  689

Query  723  GCAAACTCATCAGAGAGTCCATACTGGAGAGAAACCATTCAAACGTGGGCAATGTGGGAAAGGCTTCCATAGTA  796
            |||||||||||||||||||||.|||||||||||||||||||||.|||.|||||||||||||||.|||..|.|||
Sbjct  690  GCAAACTCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTA  763

Query  797  GATCAGCACTTAATGTTCATTGCAAATTGCACACAGGAGAGAAACCTTATAATTGTGAGGAATGTGGGAAAGCC  870
            ||||||||||||||||||||.|.|||||.||||||||||||||||||||.|.||||||||.|||||||||.|||
Sbjct  764  GATCAGCACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCC  837

Query  871  TTCATTCATGATTCACAGCTTCAGGAACATCAGAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATG  944
            ||||||||||||||.||||||.||||||||.||||||||||||||||||||||.||||||||||||||||||||
Sbjct  838  TTCATTCATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATG  911

Query  945  TGGTAAGAGCTTCCGTGTTAGATCAAGACTTAATAGGCATTCCATGGTTCACACAGGAGAAAAACCATTCAGAT  1018
            ||||||||.||||..|.||||.|||||||||||.||.||||||||||||||||||||||||||||||||.||.|
Sbjct  912  TGGTAAGACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGT  985

Query 1019  GTGATACATGTGGCAAGAACTTTCGTCAGAGATCAGCACTTAATAGTCATTCCATGGTCCACATAGAAGAGAAG  1092
            ||||||||||||..||||.|||||.|||||||||||||||||||||.||||.|||||||||||.||.||||||.
Sbjct  986  GTGATACATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAA  1059

Query 1093  CCATACAAATGTGAGCAATGTGGAAAAGGCTTCATTTGTAGGCGAGATTTTTGTAAGCATCAGATGGTCCACAC  1166
            ||.||||.|||||||||.||||||||||||||.|||.||||||.||||||||.||||||||||.||||||||||
Sbjct 1060  CCGTACAGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACAC  1133

Query 1167  AGGAGAGAAACCATATAATTGTAAAGAATGTGGGAAGACCTTCAGATGGTCCTCATGTCTTTTGAACCATCAGC  1240
            ||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||.||||||||||||||||
Sbjct 1134  AGGAGAAAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGC  1207

Query 1241  AAGTCCACAGTGGACAAAAATCCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACGACGATCT  1314
            .|||||||||||||.|||||..|||||||||||||||||||||.||||||||||||||||||||||.||..|||
Sbjct 1208  GAGTCCACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTGTCT  1281

Query 1315  TCCCATCAGAGATCCCACAATGGAGAAAAGCCATATAACTGTGAGGAGTGTGGTAAGGACTATAAAAGGAGGTT  1388
            |||||||||||||||||||.|||.||||||||||||||.||||||||||||||.||||.||||...|..|.|||
Sbjct 1282  TCCCATCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAAGTT  1355

Query 1389  GGATCTTGAGTTTCACCAGAGGGTCCACACGGGTGAGAGACCCTATAATTGTAAGGAATGTGGCAAGAGCTTTG  1462
            ..|||||||.||.||||||||||||||||||||.||||||||.||||||||||||||||||||.||||.||||.
Sbjct 1356  TAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTA  1429

Query 1463  GCTGGGCCTCCTGTCTTTTGAAACATCAGAGACTCCACAGTGGGGAAAAACCTTTCAAATGTGAAGAGTGTGGA  1536
            ||.|||||||..||.|||||||.|||.|||||||||||.|...|.|||||||.|||||||||||.||.||||||
Sbjct 1430  GCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGTGAGGACTGTGGA  1503

Query 1537  AAGAGATTTACTCAGAGTACACA--ACTTCATTC--------CCATCAGACATGCCATACTGGAGAAAAGCTAT  1600
            |||||..||       |||||||  |   |||.|        |||.|.||.|..|.|||.|||.|||||.|.||
Sbjct 1504  AAGAGGCTT-------GTACACAGGA---CATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCAT  1567

Query 1601  ACAAATGTGAGCAGTGTGAGAAGGGGTACAACAGTAAATTTAATCTTGACATGCACCAGAGGGTCCACAGGGGA  1674
            .||||||||||.|.||||.||...|.|||||.||....||.|||||.||                         
Sbjct 1568  CCAAATGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGA-------------------------  1616

Query 1675  GAGCGACCCTATAATTGTAAGGAATGTGGAAAGAGCTTTGGCTGGGCTTCATGTCTTT-----TGAAACATCAG  1743
                     ||||.||.||                             |||| |.|||     |||.|||    
Sbjct 1617  ---------TATACTTTTA-----------------------------TCAT-TATTTCTAAATGACACA----  1647

Query 1744  AGACTCCACAGTGGAGAAAAGCCATTGAAATCTGGAGTGTGGGAAGAGATCTACTCAGAATTCACAGCTTCATT  1817
                                                                                      
Sbjct 1648  --------------------------------------------------------------------------  1647

Query 1818  TACATCAGTAAGTCTATGTGGGAGAAAAGCCATA  1851
                                              
Sbjct 1648  ----------------------------------  1647

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