Construct: ORF TRCN0000474103

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014112.1_s317c1
Derived from:
ccsbBroadEn_07162
DNA Barcode:
CGTATCCGGTAAACAACTGTACCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF221 (7638)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474103
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7638 ZNF221 zinc finger protein 221 NM_001297588.1 99.7% 99.3% (many diffs)
2 human 7638 ZNF221 zinc finger protein 221 NM_001297589.1 99.7% 99.3% (many diffs)
3 human 7638 ZNF221 zinc finger protein 221 NM_013359.2 99.7% 99.3% (many diffs)
4 human 7638 ZNF221 zinc finger protein 221 XM_017027232.2 99.7% 99.3% (many diffs)
5 human 7638 ZNF221 zinc finger protein 221 XM_017027233.1 90.3% 89.9% (many diffs)
6 human 7711 ZNF155 zinc finger protein 155 XM_011527278.3 75.1% 65.3% (many diffs)
7 human 7711 ZNF155 zinc finger protein 155 XM_011527279.3 75.1% 65.3% (many diffs)
8 human 7711 ZNF155 zinc finger protein 155 XM_017027248.2 75.1% 65.3% (many diffs)
9 human 7711 ZNF155 zinc finger protein 155 XM_024451694.1 75.1% 65.3% (many diffs)
10 human 7711 ZNF155 zinc finger protein 155 NM_001260488.1 75.1% 65.1% (many diffs)
11 human 7711 ZNF155 zinc finger protein 155 NM_198089.3 74.6% 65.3% (many diffs)
12 human 7711 ZNF155 zinc finger protein 155 XM_005259215.4 74.6% 65.3% (many diffs)
13 human 7711 ZNF155 zinc finger protein 155 NM_001260486.1 74.6% 65.1% (many diffs)
14 human 7711 ZNF155 zinc finger protein 155 NM_001260487.1 74.6% 65.1% (many diffs)
15 human 7711 ZNF155 zinc finger protein 155 NM_003445.3 74.6% 65.1% (many diffs)
16 human 7767 ZNF224 zinc finger protein 224 NM_001321645.2 71.6% 63.5% (many diffs)
17 human 7767 ZNF224 zinc finger protein 224 NM_013398.4 71.6% 63.5% (many diffs)
18 human 7767 ZNF224 zinc finger protein 224 XM_017027261.2 71.6% 63.5% (many diffs)
19 human 7768 ZNF225 zinc finger protein 225 NM_001321685.2 70.6% 59% (many diffs)
20 human 7768 ZNF225 zinc finger protein 225 NM_013362.4 70.6% 59% (many diffs)
21 human 7768 ZNF225 zinc finger protein 225 XM_011527285.2 70.6% 59% (many diffs)
22 human 7768 ZNF225 zinc finger protein 225 XM_011527286.2 70.6% 59% (many diffs)
23 human 7768 ZNF225 zinc finger protein 225 XM_005259223.3 60.5% 49.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1920
ORF length:
1851
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gatttcacct tcacttgaac tgcttcattc aggactctgc aaattccctg
121aagtagaagg aaaaatgacc acattcaaag aggcagtgac attcaaggat gtggctgtgg
181tcttcactga ggaggagctg gggctgctgg accctgccca gaggaagctg taccgagatg
241tgatgctaga gaacttcagg aacctgctct cagtagggaa tcaaccattc caccaagata
301ctttccactt cttagggaag gaaaagtttt ggaagatgaa gacaacaagc caaagagaag
361ggaattcagg aggcaagatc caaattgaga tggagactgt tccagaagca ggaccacatg
421aagagtggtc ctgtcagcaa atatgggaac aaattgcaag tgacctaacc aggtctcaaa
481actccataag gaacagctct cagttcttca aagaaggtga tgtcccctgc cagattgagg
541caagactatc tataagtcac gtgcaacaga aaccttaccg ttgtaatgaa tgtaaacagt
601ccatcagtga tgtttctgtc tttgatcttc atcaacaatc acactcagga gagaaatctc
661atacatgtgg tgagtgtgga aaaagcttct gttacagccc agcccttcat attcatcaga
721gagtccatat gggagaaaaa tgctataagt gtgatgtgtg tggtaaggaa tttaatcaga
781gctcacatct gcaaactcat cagagagtcc atactggaga gaaaccattc aaacgtgggc
841aatgtgggaa aggcttccat agtagatcag cacttaatgt tcattgcaaa ttgcacacag
901gagagaaacc ttataattgt gaggaatgtg ggaaagcctt cattcatgat tcacagcttc
961aggaacatca gagaatccat actggggaga agccattcaa atgtgatata tgtggtaaga
1021gcttccgtgt tagatcaaga cttaataggc attccatggt tcacacagga gaaaaaccat
1081tcagatgtga tacatgtggc aagaactttc gtcagagatc agcacttaat agtcattcca
1141tggtccacat agaagagaag ccatacaaat gtgagcaatg tggaaaaggc ttcatttgta
1201ggcgagattt ttgtaagcat cagatggtcc acacaggaga gaaaccatat aattgtaaag
1261aatgtgggaa gaccttcaga tggtcctcat gtcttttgaa ccatcagcaa gtccacagtg
1321gacaaaaatc cttcaaatgt gaagaatgtg ggaagggatt ttatacaaat tcacgacgat
1381cttcccatca gagatcccac aatggagaaa agccatataa ctgtgaggag tgtggtaagg
1441actataaaag gaggttggat cttgagtttc accagagggt ccacacgggt gagagaccct
1501ataattgtaa ggaatgtggc aagagctttg gctgggcctc ctgtcttttg aaacatcaga
1561gactccacag tggggaaaaa cctttcaaat gtgaagagtg tggaaagaga tttactcaga
1621gtacacaact tcattcccat cagacatgcc atactggaga aaagctatac aaatgTGAGC
1681AGTGTGAGAA GGGGTACAAC AGTAAATTTA ATCTTGACAT GCACCAGAGG GTCCACAGGG
1741GAGAGCGACC CTATAATTGT AAGGAATGTG GAAAGAGCTT TGGCTGGGCT TCATGTCTTT
1801TGAAACATCA GAGACTCCAC AGTGGAGAAA AGCCATTGAA ATCTGGAGTG TGGGAAGAGA
1861TCTACTCAGA ATTCACAGCT TCATTTACAT CAGTAAGTCT ATGTGGGAGA AAAGCCATAT
1921TGCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1981GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
2041TTTATATATC TTGTGGAAAG GACGACGTAT CCGGTAAACA ACTGTACCCA CGCGTTAAGT
2101Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)