Nucleotide Global Alignment
Description
- Query:
- TRCN0000474121
- Subject:
- XR_001754314.2
- Aligned Length:
- 4584
- Identities:
- 738
- Gaps:
- 3843
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGGGTACCAGGCTCCCTGCGGAGCGGCAGGGGCCGGTCTAGTTGCTAAGAAGCTGAGTCTCCACCAATCATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGCACCCAGTGGGCGGGGCGCGGCTCGCCGCGTCTGTGGTAACCCGGGCGGCGGCGAAGGAGGAGGCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGCGGTGAGAGGCTGGCGACTGGGTTGGGCGCGGCAGAGATGCATTAGGGGTCCCGATCCCGGGCCCCGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTAGAGGAAGAGGAGGGCGGCTAGAGGAGGGGAAGAGCTTCCCTTACTCCAGCCGAAAGGATGCAGGTGTCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCAGCCCCTGATGGGCGGGAACAACCAAACGGGATTCCGGATCCGGGCTGCGAGGGGGCGGTCCACGTTGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGTTGAGGGGTCTGGGGATCCTGTTGACTGCACGTTGCCATTTGGGCCTGGCGGATCCGCCTTTTTTCTTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCCTTTGCGTGGGGCCCACTGGCCACCCCAGCTTCCTAAGGGCAGCTGCTAGTTGACGCTCGCGAATTACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCTCCTACATATTTTTTATTTAGAATTTTTCAACTACTTTTATTTTATCTGCCTTTCACTTAAATGGAAATGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACTATGGGCAAGTCTCAAGTCCAGCCACACTCCCGTAGGAGCTATTGTTGTGCTGTCAGTATCTGTAGTTTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTCTTGGCCCTAGATCCGGAACTATCCAACAAGGCATTAAGTTCACCCCTTAAATTTAGGTACCCCATTTTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAATACAGTCTGTGACAAAGCTCAAACTGCAGACATGTTCAGATCAGCATTATTAGAACTGCAACAGGCAAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAAAAAGAAACTAGAAATAGCCTAAATGCCCAGCCACAAATGGATAAATAAGTACAGGGAAAACTAAATAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTGAGAATGCAAGAAGTAGACTATAAAAATGGAATGAATATGTAGATTATAATTGGGCAAAATCTATGGATT 962
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 963 ATTAATGAAATTTGAAAAGGCAATACAGAGATGTAAATGGTTGTTGTGTTAAGAGAGAGAGAGAGAGAGAAAAT 1036
Query 3 GACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCACTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGAAA 76
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1037 GACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAACCATGAAA 1110
Query 77 TTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCTGGATGGCAGC 1184
Query 151 AAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTGCC 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAACCTATTACTCTGCC 1258
Query 225 TGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGCGACAAAGGTGT 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1259 TGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTGGCATTGTGACAAAGGTGT 1332
Query 299 TTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTTCA 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGAAAATGTTCTCAAAGATTCTTCA 1406
Query 373 AGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGCAG 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAATATAAGAACTCTGAAAATCAACGCAG 1480
Query 447 CTGGAATGTTAACCTTAGAAAGTTT------------------------------------------------- 471
|||||||||||||||||||||||||
Sbjct 1481 CTGGAATGTTAACCTTAGAAAGTTTCCAGACGTCCAGGTAGGTGAAAGAACTGACCCTAAAACTTTGAAAGATC 1554
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1555 TTCACTTTTCAGAGAGTCCATTGGAAATCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAG 1628
Query 472 --CCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAATTCAAAG 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCCCAGTCCCCCGGTTTTGCACACGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAATTCAAAG 1702
Query 544 GGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAG 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGAGACAGACTTTCTCAAGTGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAG 1776
Query 618 AATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGT 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AATGTGGCTCTCCTGTCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGT 1850
Query 692 GCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGCGTGGTGTG------------------------ 741
|||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1851 GCAGAATGCAGAAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCT 1924
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1925 GCAGCCACAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCACC 1998
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1999 TGAGATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCCT 2072
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2073 CCTCCGCCCACTCAGAAAGGGGGGACCATTTCCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCGTCCTT 2146
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2147 CTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGGCCAGCAATC 2220
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2221 ACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGTGAAGTCCCTAGTGAAACTTAGCTTGGACAGAAGC 2294
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2295 CTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGCCCCGATGTGCCTGGCAGTCCCTGAATATTCCTTT 2368
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2369 GCCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTCTTCTACCCATCTGGCAAGC 2442
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2443 TGCTAGCAAAAAAGGAACAGGAACTAGCCTCTCAAAAGCAGAGGCAGGAGAAAATGAGTGACCATAAACCCCTC 2516
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2517 CTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCACCTCAGGTGTTA 2590
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2591 TGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTATCTCTGCTACTGTCC 2664
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2665 ACGAAGATGGTTGTGAAGTTAGCATCAGACTGAATTATAGTCAAGTCTCAAACAAGGTGAGGAAACTGAGGCTC 2738
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2739 AGAGAAGTTAAGCAACCTGCTTCTTCCAAGGGCACTAAGTTAGTAAGTGGCAGACCCAGGATTCACACTTGGCA 2812
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2813 GCCTGAGACCTTCCCATCATGACACCCTAATTCCAAGACATTGAAGGACTTTAAGCAGAGAAATGACACAATCA 2886
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2887 CTTATAAAGGATCTAAAGAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGC 2960
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2961 CGAGGGTGATGGGGGGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACTACAGCCAGAGTACCTCAGATACTA 3034
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3035 TTGAAAAAATCAAAAGGATAAAGAATTTCAAGACCAAAACTTTTCAAGAAAAGAAGGAGCAGCTTATACCTGAA 3108
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3109 AACAGACTCCTGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGA 3182
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3183 GGGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACCATG 3256
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3257 AAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATACAGCTCTT 3330
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3331 CATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAATGCAAGCATCCA 3404
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3405 AAAGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACCTTGTCACCTCACTCT 3478
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3479 TTGCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCTCAGCCTGGATGACTGTTAG 3552
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3553 CCCTGAGGCCTCCACGGGACTTCATTTAAGAATACGTGCATGGCTGGCACAGTGGCTTACGCCTGTAATCCCAG 3626
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3627 CACTTTGGGAGGCTGAGGCTGGCGTATCACCTGAGGTTGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAAC 3700
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3701 CCCGTCTCTACTAAAAATACAAAATTAGTCGGGCGTAGTGGTGCATGCCTGTAATCCCAGTTACTCGAGAGGCT 3774
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3775 GAGGCAGGAAAATCGCTTGAACCCGGGAGGCAGAGGTTACAGTGAGCCAAGATCGCGCCATCGCACTCCAGCCT 3848
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3849 GGGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAGAATATGTGCAGCTCTGGCTATTCTTTAATCATGTC 3922
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3923 TTTCTGAAATGTGTATTTGAGATTAGAAATTGAGGTTGAGAGGAACTCAGGAGATTTTTTTTTTAAATCATATG 3996
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3997 ACAGTATAAGCCATCAGTACTAAATGGACAGCTCCCAGTATACTGTGGACTGTGATAAACTGAATGTATGTTTT 4070
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4071 TTAATGGTTTATTGCTGCAGGTTTTTTGTGTATTTGATTTTTAGTTTTTAACTTATTTTTCAATAGGTAATAAT 4144
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4145 TGCACATGGTTCAAAGCTAAAAGGTATGAAGTATTATGTAGGGATACGTCCCTCCCATTCTGTCCCACAGCCAC 4218
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4219 CACCTCTCTCCTCAGCCAGCAATGACATCAGCGTCGACTTGCCTTTCCCGGGGTTGTGCAGAGTTAGATATGCA 4292
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4293 CATACATGTGGTATAAGCACATGTACAGAGGAGTACACATAGCATATAAACATGTCTGTAGCACATATATATTC 4366
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4367 TTTCCCCTCTTTTAAAACAAATGGTAGCAAACCAACCACACACTGTTCTGTATCTTGCTCTGTTTGCTTGATAC 4440
Query 742 -------------------------------------------------------------------------- 741
Sbjct 4441 ATCTTGTAAGTGGCTCCTAATTACTATGTAAAGATTGACCTTATTTAAATTTTTTTATGTTGAAATCATCAATA 4514
Query 742 ---------------------------------------------------------------------- 741
Sbjct 4515 TTCCCATCATTATGGTGTGTTCTTTGATTGACAAATCAGCTCTCAATAAACCACTTATAAGAATGTGTAA 4584
