Nucleotide Global Alignment

Description

• Query: TRCN0000474127
• Subject: NR_048552.1
• Aligned Length: 3515
• Identities: 2018
• Gaps: 1497

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGTGCGTCATCAGTCGGCGCCAGCGGCCGCACGCCGCGGAGCAGGGGCTCGGAGGTCCCGGGATTACGGTGCT  74

Query    1  ----------------------------------------------------ATGCAGGTCTCCAGCCTCAATG  22
                                                                ||||||||||||||||||||||
Sbjct   75  CGAGCACGCTGGTGGGAAAGGACCCGGGACTTGAACAGTGTTGTGCGGCGCCATGCAGGTCTCCAGCCTCAATG  148

Query   23  AGGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTCTGATAGGAAGAAGAGAGCGCTA  96
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  149  AGGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCCCTTCCTG--------------------------------  190

Query   97  CAGAAGAAAGATGTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTGAAATGCCTACTGTGTGTACCAC  170
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  191  --------------AGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTGAAATGCCTACTGTGTGTACCAC  250

Query  171  TATTAAGGTGTCAAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAACCTCGGGTTCGATGTTATGACA  244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  251  TATTAAGGTGTCAAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAACCTCGGGTTCGATGTTATGACA  324

Query  245  CCTATCAATTATCCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCACCTTTGAAATTTTGTCTGATGAC  318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  325  CCTATCAATTATCCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCACCTTTGAAATTTTGTCTGATGAC  398

Query  319  TACTCAAAGATTGTCTTCTTACATAATGATAGATACATTGAATTTCATTCGCAATCAGGTTTTTACTACAAAAC  392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  399  TACTCAAAGATTGTCTTCTTACATAATGATAGATACATTGAATTTCATTCGCAATCAGGTTTTTACTACAAAAC  472

Query  393  CAGAATACCAAAGTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTTGGTGCAAGTT  466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  473  CAGAATACCAAAGTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTTGGTGCAAGTT  546

Query  467  CTGAAGTTTATAGGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACAAACTGATGCTGCGGAGAATAAT  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  547  CTGAAGTTTATAGGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACAAACTGATGCTGCGGAGAATAAT  620

Query  541  GTTTGTGACATAAATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGGGTAGAGTGGAGTGCTGGGACCC  614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  621  GTTTGTGACATAAATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGGGTAGAGTGGAGTGCTGGGACCC  694

Query  615  AAGAACTCGAAACAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACAGCAGATTCAGAGATAAACAGTT  688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  695  AAGAACTCGAAACAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACAGCAGATTCAGAGATAAACAGTT  768

Query  689  TACCAACAATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACAACCACAGGGCAGGTTTTA  762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  769  TACCAACAATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACAACCACAGGGCAGGTTTTA  842

Query  763  TTATATGACCTTCGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATGGGCTGCCCATTAAGTCCGTTCA  836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  843  TTATATGACCTTCGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATGGGCTGCCCATTAAGTCCGTTCA  916

Query  837  TTTCCAGGATTCATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAGATGTGGAATAAGAACTCCGGAA  910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  917  TTTCCAGGATTCATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAGATGTGGAATAAGAACTCCGGAA  990

Query  911  AAATATTTACTTCCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTACCCCAACTCAGGCATGCTTCTG  984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  991  AAATATTTACTTCCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTACCCCAACTCAGGCATGCTTCTG  1064

Query  985  ACGGCCAATGAAACCCCCAAGATGGGCATCTATTACATTCCAGTTTTGGGTCCTGCTCCTCGGTGGTGTTCCTT  1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065  ACGGCCAATGAAACCCCCAAGATGGGCATCTATTACATTCCAGTTTTGGGTCCTGCTCCTCGGTGGTGTTCCTT  1138

Query 1059  CTTAGACAACTTGACCGAAGAATTAGAAGAGAATCCAGAAAGCACAGTCTATGATGATTATAAATTTGTCACCA  1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139  CTTAGACAACTTGACCGAAGAATTAGAAGAGAATCCAGAAAGCACAGTCTATGATGATTATAAATTTGTCACCA  1212

Query 1133  AGAAAGACCTTGAAAATTTAGGGCTCACCCACCTCATTGGATCTCCTTTCCTCCGGGCATATATGCATGGGTTT  1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1213  AGAAAGACCTTGAAAATTTAGGGCTCACCCACCTCATTGGATCTCCTTTCCTCCGGGCATATATGCATGGGTTT  1286

Query 1207  TTCATGGATATAAGACTCTATCACAAGGTGAAACTGATGGTAAATCCATTTGCTTATGAAGAATATAGGAAAGA  1280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287  TTCATGGATATAAGACTCTATCACAAGGTGAAACTGATGGTAAATCCATTTGCTTATGAAGAATATAGGAAAGA  1360

Query 1281  TAAAATACGACAGAAAATAGAAGAAACACGTGCACAGAGAGTCCAGTTAAAGAAATTGCCAAAAGTTAACAAAG  1354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361  TAAAATACGACAGAAAATAGAAGAAACACGTGCACAGAGAGTCCAGTTAAAGAAATTGCCAAAAGTTAACAAAG  1434

Query 1355  AGCTGGCACTTAAATTAATTGAGGAAGAAGAGGAGAAGCAGAAATCTACATGGAAAAAGAAAGTTAAGAGTCTT  1428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435  AGCTGGCACTTAAATTAATTGAGGAAGAAGAGGAGAAGCAGAAATCTACATGGAAAAAGAAAGTTAAGAGTCTT  1508

Query 1429  CCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACTTCCAAGTAGATGAAGAGAGTGA  1502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509  CCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACTTCCAAGTAGATGAAGAGAGTGA  1582

Query 1503  AGAATTTAGGCTTCTGAATCCACTTGTTTCAAAAATTAGTGAAAAAAGGAAGAAGAAACTAAGACTCTTAGAGC  1576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1583  AGAATTTAGGCTTCTGAATCCACTTGTTTCAAAAATTAGTGAAAAAAGGAAGAAGAAACTAAGACTCTTAGAGC  1656

Query 1577  AACAAGAACTTCGTGAAAAAGAAGAGGAGGAAGAGCCGGAAGGAAAACCAAGTGATGCAGAAAGTTCGGAGAGT  1650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657  AACAAGAACTTCGTGAAAAAGAAGAGGAGGAAGAGCCGGAAGGAAAACCAAGTGATGCAGAAAGTTCGGAGAGT  1730

Query 1651  TCAGATGATGAAAAAGCCTGGGTTGAAGAGGTCAGGAAGCAACGCAGACTCCTCCAGCAGGAGGAAAAAGTGAA  1724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731  TCAGATGATGAAAAAGCCTGGGTTGAAGAGGTCAGGAAGCAACGCAGACTCCTCCAGCAGGAGGAAAAAGTGAA  1804

Query 1725  GCGGCAGGAACGACTCAAGGAGGACCAGCAGACAGTCCTAAAGCCCCAGTTTTATGAGATCAAAGCAGGAGAAG  1798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1805  GCGGCAGGAACGACTCAAGGAGGACCAGCAGACAGTCCTAAAGCCCCAGTTTTATGAGATCAAAGCAGGAGAAG  1878

Query 1799  AATTTAGAAGCTTCAAAGATTCTGCCACAAAGCAGAAACTGATGAACAAAACCCTTGAAGATCGTTTGAAAATT  1872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1879  AATTTAGAAGCTTCAAAGATTCTGCCACAAAGCAGAAACTGATGAACAAAACCCTTGAAGATCGTTTGAAAATT  1952

Query 1873  GAAGCAAAAAATGGGACATTGAGTGTATCCGACACCACCGTTGGCAGCAAACAATTGACATTCACGTTAAAGAG  1946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1953  GAAGCAAAAAATGGGACATTGAGTGTATCCGACACCACCGTTGGCAGCAAACAATTGACATTCACGTTAAAGAG  2026

Query 1947  GTCTGAACAGCAGAAGAAGCAACAGGAGGCTGAGAAACTGCATCGACAAGAAAGGAAAAGACTCCGTCGTTCGG  2020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2027  GTCTGAACAGCAGAAGAAGCAACAGGAGGCTGAGAAACTGCATCGACAAGAAAGGAAAAGACTCCGTCGTTCGG  2100

Query 2021  CCGGACACCTGAAGTCAAGACACAAAAGAGGACGGTCGTTTCAT------------------------------  2064
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct 2101  CCGGACACCTGAAGTCAAGACACAAAAGAGGACGGTCGTTTCATTGATTTGGGAAGTGGTCCTACCTGTGATTA  2174

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2175  GGGAGGGGTACGTCTCCCCCAAACTGATCATCGTTAGGGTGTTAAACACAGACGAGGAAACACACGTTTTTAAA  2248

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2249  GTTCATGTACGTTCTTGTACACAGAGGTAAAGATTTGAAAACCTGTGCCTTGTGGGTTGGACTTTGAAGCTGGC  2322

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2323  CCCGCCGACGGCCACCGCACAGCCCCAGGGGTGTGCTTGCGAGTCGTTGCTCCCTGGAAACATTGTCCTTTCCC  2396

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2397  CACGGCTTTAATCATGAAAACCAGGCTGGGGTTTTTTTAATATTGTGAAATGTACACCATGAAATGAAAGGTTT  2470

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2471  ATCCTGTGCCAGAAACCAAGGTTTATCATGCTCTAGGAACTTTTTTCTTACACTGCCTACCGCCATTCATGATT  2544

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2545  AAACCATCCAGAAATACCATCCCTGTTTTACCTGGTGTCTGTGTATTGCCTGTGTTTGTGTTTATAAGTTTATG  2618

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2619  CTGATAGGTTTGTTCGGCTTGTTTATGTATTAGTTTGGGATTTGTTTTTAAATAATTTATACCAAGAGAGTATA  2692

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2693  ATCTAATGGTGCAGGTTGAGAGCATCCCAAATCCGAAAATCTAAAACTGTTTGAGCACTGTATTTATCTGTTCT  2766

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2767  TGCACTGCTATAAAGAACTACCTGAAACTGGGTAATTTATAAGTAAAGAAAAGAGGTTTAATTGACTCACAGTT  2840

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2841  CTACAGGTGGTACAGGAAGCATGGCTGTGGAGGCCCTGGGAAGCTTACAATCGTGGCAGAAGGTGAAGCGGAAG  2914

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2915  CAGGTATGTCCTGCGTGGCTAGAGCCAGAGGAGGAGGGCAAAGGGGCAGATGCTGCACACTTTCAAACACCAGA  2988

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2989  TCTCCAAGAACTCACTAACACAGAATAGCAAGGGGGAAGTCTGCCCCCATGTTTCAGTCACCTCCCTCCAGGCC  3062

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 3063  CCTCCTCCAACACCGAAGATTACAATTTGACATGAGATTTGTGTGGGGACACAGAGCAAAACCATATCAAGCAC  3136

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 3137  TGACATGACATTGGAGGAAAATGCTCATTAGAGCTTTTCAGGTTTTGGATTTTCAGATTTGGGATACTTGACTA  3210

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 3211  GTAAATATAATACAGATATTCCAAAACACACAAAAAAACCAAAGTCTAAAAGACTTCTGGTCCCAAGCATTTCA  3284

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 3285  GATAAGGGATACCCAACCTGTAATAATGGGAAACAAGCAGTAGAGGCTGTTGGTTAATCTTGGCACAAGTTTAA  3358

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 3359  TTACAGGTTTTTTTTTTTTCCTGTTTCTTAAGTACAGTCAAACATAAACTTACTGGAGGAAACATTTATAAAAA  3432

Query 2065  -------------------------------------  2064
                                                 
Sbjct 3433  TAAATATACTTTCATTTGAAAAAAAAAAAAAAAAAAA  3469