Nucleotide Global Alignment

Description

Query:
TRCN0000474127
Subject:
XM_017315015.1
Aligned Length:
2066
Identities:
1693
Gaps:
157

Alignment

Query    1  ATGCAGGTCTCCAGCCTCAATGAGGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGATAGGAAGAAGAGAGCGCTACAGAAGAAAGATGTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAATGCCTACTGTGTGTACCACTATTAAGGTGTCAAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAA  222
              |||||||||||||||||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||.
Sbjct    1  --ATGCCTACTGTGTGTACTACTATCAAGGTGTCAAAAGATGGACAGTATATTTTAGCAACTGGAACATATAAG  72

Query  223  CCTCGGGTTCGATGTTATGACACCTATCAATTATCCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCAC  296
            ||||||||.||.|||||||||||.|||||.||||||.||||||||||||||||.||.|||||.|||||||||||
Sbjct   73  CCTCGGGTCCGGTGTTATGACACATATCAGTTATCCCTGAAGTTTGAAAGGTGCTTGGATTCTGAAGTTGTCAC  146

Query  297  CTTTGAAATTTTGTCTGATGACTACTCAAAGATTGTCTTCTTACATAATGATAGATACATTGAATTTCATTCGC  370
            ||||||.|||||.||.||||||||.||||||||||||||||||||||||||.|||||.|||||||||||.||.|
Sbjct  147  CTTTGAGATTTTATCAGATGACTATTCAAAGATTGTCTTCTTACATAATGACAGATATATTGAATTTCACTCAC  220

Query  371  AATCAGGTTTTTACTACAAAACCAGAATACCAAAGTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGAC  444
            |||||||.||||||||||||||||||||.||.|||||.||..||||.|||||||||||||||||||||||||||
Sbjct  221  AATCAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCTGTGAC  294

Query  445  TTGTACTTTGTTGGTGCAAGTTCTGAAGTTTATAGGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACA  518
            |||||||||||.||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.||
Sbjct  295  TTGTACTTTGTAGGTGCAAGCTCTGAAGTTTATAGATTAAACTTAGAACAAGGGCGGTACCTGAATCCTCTCCA  368

Query  519  AACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGG  592
            .||.||.||.||||||||.||||||||||||||||||.||||||||||||||||.|||||||||||.|||||||
Sbjct  369  GACGGACGCCGCGGAGAACAATGTTTGTGACATAAATGCAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGG  442

Query  593  GTAGAGTGGAGTGCTGGGACCCAAGAACTCGAAACAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACA  666
            ||.|||||||.||||||||.||||||....||||.||.||||||.||||||||||.||.|||||.|||||||||
Sbjct  443  GTCGAGTGGAATGCTGGGATCCAAGAGTAAGAAAAAGGGTTGGCGTGTTAGACTGTGCATTAAATAGTGTCACA  516

Query  667  GCAGATTCAGAGATAAACAGTTTACCAACAATCTCTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGG  740
            ||||||||||||||||||||.|||||.||.||||||||.|||||.||||||||.|||||||.||||||||||||
Sbjct  517  GCAGATTCAGAGATAAACAGCTTACCCACCATCTCTGCATTGAAGTTTAATGGAGCCTTGAGCATGGCAGTTGG  590

Query  741  AACAACCACAGGGCAGGTTTTATTATATGACCTTCGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATG  814
            ||||.|||||||||||||.||.||||||||.|||||.||.||||||||.|||||||||||.|||||||||||||
Sbjct  591  AACATCCACAGGGCAGGTGTTGTTATATGATCTTCGCTCGGATAAGCCGTTGCTAGTTAAGGATCACCAGTATG  664

Query  815  GGCTGCCCATTAAGTCCGTTCATTTCCAGGATTCATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAG  888
            |||||||.||||||||.|||||||||||||||||..|||||.||.||||||||||.||||||.||||||||||.
Sbjct  665  GGCTGCCGATTAAGTCAGTTCATTTCCAGGATTCCCTAGATTTGGTTTTGTCTGCAGACTCTAGAATTGTCAAA  738

Query  889  ATGTGGAATAAGAACTCCGGAAAAATATTTACTTCCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTA  962
            ||||||||.|||.|||||||.||||||||||||||.|||||||||||.|||||.||||||||||||||.|||||
Sbjct  739  ATGTGGAACAAGGACTCCGGGAAAATATTTACTTCGTTGGAGCCAGAACATGATCTTAATGATGTTTGCCTCTA  812

Query  963  CCCCAACTCAGGCATGCTTCTGACGGCCAATGAAACCCCCAAGATGGGCATCTATTACATTCCAGTTTTGGGTC  1036
            .||||.||||||.||||||||.||.|||||||||.||||||||||||||||.||.||||||||.||||||||||
Sbjct  813  TCCCAGCTCAGGAATGCTTCTTACTGCCAATGAATCCCCCAAGATGGGCATTTACTACATTCCGGTTTTGGGTC  886

Query 1037  CTGCTCCTCGGTGGTGTTCCTTCTTAGACAACTTGACCGAAGAATTAGAAGAGAATCCAGAAAGCACAGTCTAT  1110
            |||||||..||||||||||||||.|.|||||||||||.|||||.|||||||||||||||||.||||||||.|||
Sbjct  887  CTGCTCCCAGGTGGTGTTCCTTCCTGGACAACTTGACAGAAGAGTTAGAAGAGAATCCAGAGAGCACAGTGTAT  960

Query 1111  GATGATTATAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCTCACCCACCTCATTGGATCTCCTTTCCT  1184
            ||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||||||||
Sbjct  961  GATGATTACAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCTCACACATCTCATTGGATCACCTTTCCT  1034

Query 1185  CCGGGCATATATGCATGGGTTTTTCATGGATATAAGACTCTATCACAAGGTGAAACTGATGGTAAATCCATTTG  1258
            |||.|||||||||||||||||||||||||||||.||||||||.||||||||||||.|||||||.||||||||||
Sbjct 1035  CCGAGCATATATGCATGGGTTTTTCATGGATATCAGACTCTACCACAAGGTGAAATTGATGGTCAATCCATTTG  1108

Query 1259  CTTATGAAGAATATAGGAAAGATAAAATACGACAGAAAATAGAAGAAACACGTGCACAGAGAGTCCAGTTAAAG  1332
            ||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||||||
Sbjct 1109  CTTATGAAGAATATAGGAAAGATAAAATTCGACAGAAGATAGAAGAAACACGTGCACAGAGAGTCCAATTAAAG  1182

Query 1333  AAATTGCCAAAAGTTAACAAAGAGCTGGCACTTAAATTAATTGAGGAAGAAGAGGAGAAGCAGAAATCTACATG  1406
            |||.|||||||||||||||||||.||||||||||||||||||||.||.|||||||||||.||.||.|||||...
Sbjct 1183  AAACTGCCAAAAGTTAACAAAGAACTGGCACTTAAATTAATTGAAGAGGAAGAGGAGAAACAAAAGTCTACGCT  1256

Query 1407  GAAAAAGAAAGTTAAGAGTCTTCCTAATATTCTCACCGATGATCGATTTAAAGTTATGTTTGAGAACCCTGACT  1480
            ||||||||||||||||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||.||||
Sbjct 1257  GAAAAAGAAAGTTAAGAGCCTCCCTAATATCCTCACGGATGATCGATTTAAAGTTATGTTTGAGAATCCCGACT  1330

Query 1481  TCCAAGTAGATGAAGAGAGTGAAGAATTTAGGCTTCTGAATCCACTTGTTTCAAAAATTAGTGAAAAAAGGAAG  1554
            ||||.||.||.||.|||||||||||.||.||||||||.||.||.||.||.||.|..||.|||||.||.||||||
Sbjct 1331  TCCAGGTGGACGAGGAGAGTGAAGAGTTCAGGCTTCTCAACCCCCTCGTCTCGAGGATCAGTGAGAAGAGGAAG  1404

Query 1555  AAGAAACTAAGACTCTTAGAGCAACAAGAACTTCGTGAAA--AAGAAGAGGAGGAAGAGCCGGAAGGAAAACCA  1626
            |||.|.||.||.|||||.|||||.||.||.||     .||  |.||||||||||||||.||||||||||||||.
Sbjct 1405  AAGCAGCTGAGGCTCTTGGAGCAGCAGGAGCT-----CAAGGATGAAGAGGAGGAAGAACCGGAAGGAAAACCC  1473

Query 1627  AGTGATGCAGAAAGTTCGGAGAGTTCAGATGATGAAAAAGCCTGGGTTGAAGAGGTCAGGAAGCAACGCAGACT  1700
            |||||||||||||||||.|||||.|||||||||||.||||..|||||||||||.|||||||||||.||||||||
Sbjct 1474  AGTGATGCAGAAAGTTCAGAGAGCTCAGATGATGAGAAAGGTTGGGTTGAAGAAGTCAGGAAGCAGCGCAGACT  1547

Query 1701  CCTCCAGCAGGAGGAAAAAGTGAAGCGGCAGGAACGACTCAAGGAGGACCAGCAGACAGTCCTAAAGCCCCAGT  1774
            |||.||||||||.||||.|||||||||||||||.|.|||.|||||||||||||||||||||||.||||||||||
Sbjct 1548  CCTTCAGCAGGAAGAAAGAGTGAAGCGGCAGGAGCAACTGAAGGAGGACCAGCAGACAGTCCTGAAGCCCCAGT  1621

Query 1775  TTTATGAGATCAAAGCAGGAGAAGAATTTAGAAGCTTCAAAGATTCTGCCACAAAGCAGAAACTGATGAACAAA  1848
            |.||.||||||||||||||.|||||.||.||.|||||||||||.||||||||.|||||||.|||.|||||||||
Sbjct 1622  TCTACGAGATCAAAGCAGGCGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACCAAGCAGAGACTAATGAACAAA  1695

Query 1849  ACCCTTGAAGATCGTTTGAAAATTGAAGCAAAAAATGGGACATTGAGTGTATCCGACACCACCGTTGGCAGCAA  1922
            ||.||.|||||||||||||||.|||||||||||.||||||||||||.||||||.||||||||.|||||||||||
Sbjct 1696  ACTCTGGAAGATCGTTTGAAACTTGAAGCAAAACATGGGACATTGAATGTATCGGACACCACTGTTGGCAGCAA  1769

Query 1923  ACAATTGACATTCACGTTAAAGAGGTCTGAACAGCAGAAGAAGCAACAGGAGGCTGAGAAACTGCATCGACAAG  1996
            .||.||||||||.||..|.|||||||||||||||||.||||||||||||||||||||.|||||||||||.||.|
Sbjct 1770  GCAGTTGACATTTACTCTCAAGAGGTCTGAACAGCAAAAGAAGCAACAGGAGGCTGAAAAACTGCATCGTCAGG  1843

Query 1997  AAAGGAAAAGACTCCGTCGTTCGGCCGGACACCTGAAGTCAAGACACAAAAGAGGACGGTCGTTTCAT  2064
            |||||||||..||.||..|.||||||.|.|||||||.|||.||||.||.||||||.|||.|.|||||.
Sbjct 1844  AAAGGAAAAATCTGCGCAGGTCGGCCAGCCACCTGAGGTCCAGACCCAGAAGAGGCCGGCCCTTTCAC  1911

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