Nucleotide Global Alignment

Description

Query:
TRCN0000474127
Subject:
XR_001738957.1
Aligned Length:
2732
Identities:
2064
Gaps:
668

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTCGGCGCCAGCGGCCGCACGCCGCGGAGCAGGGGCTCGGAGGTCCCGGGATTACGGTGCTCGAGCACGCTGG  74

Query    1  ----------------------------------------ATGCAGGTCTCCAGCCTCAATGAGGTGAAGATTT  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct   75  TGGGAAAGGACCCGGGACTTGAACAGTGTTGTGCGGCGCCATGCAGGTCTCCAGCCTCAATGAGGTGAAGATTT  148

Query   35  ACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTCTGATAGGAAGAAGAGAGCGCTACAGAAGAAAGAT  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACAGCCTCAGCTGCGGCAAGTCCCTTCCTGAGTGGCTTTCTGATAGGAAGAAGAGAGCGCTACAGAAGAAAGAT  222

Query  109  GTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTGAAATGCCTACTGTGTGTACCACTATTAAGGTGTC  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTAGATGTCCGTAGGAGAATTGAACTTATTCAGGACTTTGAAATGCCTACTGTGTGTACCACTATTAAGGTGTC  296

Query  183  AAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAACCTCGGGTTCGATGTTATGACACCTATCAATTAT  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAAGATGGACAGTACATTTTAGCAACTGGAACATATAAACCTCGGGTTCGATGTTATGACACCTATCAATTAT  370

Query  257  CCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCACCTTTGAAATTTTGTCTGATGACTACTCAAAGATT  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCTTGAAGTTTGAAAGGTGTTTAGATTCAGAAGTTGTCACCTTTGAAATTTTGTCTGATGACTACTCAAAGATT  444

Query  331  GTCTTCTTACATAATGATAGATACATTGAATTTCATTCGCAATCAGGTTTTTACTACAAAACCAGAATACCAAA  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTCTTCTTACATAATGATAGATACATTGAATTTCATTCGCAATCAGGTTTTTACTACAAAACCAGAATACCAAA  518

Query  405  GTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTTGGTGCAAGTTCTGAAGTTTATA  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTTTGGGAGAGATTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTTGGTGCAAGTTCTGAAGTTTATA  592

Query  479  GGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACAAACTGATGCTGCGGAGAATAATGTTTGTGACATA  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGTTAAACTTAGAACAAGGACGATACCTGAATCCTCTACAAACTGATGCTGCGGAGAATAATGTTTGTGACATA  666

Query  553  AATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGGGTAGAGTGGAGTGCTGGGACCCAAGAACTCGAAA  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATTCAGTGCATGGCTTGTTTGCCACAGGAACCATAGAGGGTAGAGTGGAGTGCTGGGACCCAAGAACTCGAAA  740

Query  627  CAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACAGCAGATTCAGAGATAAACAGTTTACCAACAATCT  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGAGTTGGCCTGTTAGACTGCGCCTTAAACAGTGTCACAGCAGATTCAGAGATAAACAGTTTACCAACAATCT  814

Query  701  CTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACAACCACAGGGCAGGTTTTATTATATGACCTT  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGCTTTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACAACCACAGGGCAGGTTTTATTATATGACCTT  888

Query  775  CGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATGGGCTGCCCATTAAGTCCGTTCATTTCCAGGATTC  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGATCTGATAAGCCATTGCTAGTTAAAGATCACCAGTATGGGCTGCCCATTAAGTCCGTTCATTTCCAGGATTC  962

Query  849  ATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAGATGTGGAATAAGAACTCCGGAAAAATATTTACTT  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATTAGATCTGATTTTGTCTGCTGACTCTCGAATTGTCAAGATGTGGAATAAGAACTCCGGAAAAATATTTACTT  1036

Query  923  CCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTACCCCAACTCAGGCATGCTTCTGACGGCCAATGAA  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCTTGGAGCCAGAGCATGACCTTAATGATGTTTGTCTCTACCCCAACTCAGGCATGCTTCTGACGGCCAATGAA  1110

Query  997  ACCCCCAAGATGGGCATCTATTACATTCCA--------------------------------------------  1026
            ||||||||||||||||||||||||||||||                                            
Sbjct 1111  ACCCCCAAGATGGGCATCTATTACATTCCATTCTCTAAACCAGTGCTGTCCAGTTCTCTAAACCAAAGTCTGCC  1184

Query 1027  --------------------------------------------------------------------------  1026
                                                                                      
Sbjct 1185  ACCAGCGTTTCTGTGATGACGGACACGTTCTATATCTGCTGTGTCCTGTGTGGTAGCCATTAGTCACATGTAGC  1258

Query 1027  -----------------GTTTTGGGTCCTGCTCCTCGGTGGTGTTCCTTCTTAGACAACTTGACCGAAGAATTA  1083
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGTTGAGCACTTGAAATGTTTTGGGTCCTGCTCCTCGGTGGTGTTCCTTCTTAGACAACTTGACCGAAGAATTA  1332

Query 1084  GAAGAGAATCCAGAAAGCACAGTCTATGATGATTATAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCT  1157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAAGAGAATCCAGAAAGCACAGTCTATGATGATTATAAATTTGTCACCAAGAAAGACCTTGAAAATTTAGGGCT  1406

Query 1158  CACCCACCTCATTGGATCTCCTTTCCTCCGGGCATATATGCATGGGTTTTTCATGGATATAAGACTCTATCACA  1231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CACCCACCTCATTGGATCTCCTTTCCTCCGGGCATATATGCATGGGTTTTTCATGGATATAAGACTCTATCACA  1480

Query 1232  AGGTGAAACTGATGGTAAATCCATTTGCTTATGAAGAATATAGGAAAGATAAAATACGACAGAAAATAGAAGAA  1305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGTGAAACTGATGGTAAATCCATTTGCTTATGAAGAATATAGGAAAGATAAAATACGACAGAAAATAGAAGAA  1554

Query 1306  ACACGTGCACAGAGAGTCCAGTTAAAGAAATTGCCAAAAGTTAACAAAGAGCTGGCACTTAAATTAATTGAGGA  1379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ACACGTGCACAGAGAGTCCAGTTAAAGAAATTGCCAAAAGTTAACAAAGAGCTGGCACTTAAATTAATTGAGGA  1628

Query 1380  AGAAGAGGAGAAGCAGAAATCTACATGGAAAAAGAAAGTTAAGAGTCTTCCTAATATTCTCACCGATGATCGAT  1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGAAGAGGAGAAGCAGAAATCTACATGGAAAAAGAAAGTTAAGAGTCTTCCTAATATTCTCACCGATGATCGAT  1702

Query 1454  TTAAAGTTATGTTTGAGAACCCTGACTTCCAAGTAGATGAAGAGAGTGAAGAATTTAGGCTTCTGAATCCACTT  1527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TTAAAGTTATGTTTGAGAACCCTGACTTCCAAGTAGATGAAGAGAGTGAAGAATTTAGGCTTCTGAATCCACTT  1776

Query 1528  GTTTCAAAAATTAGTGAAAAAAGGAAGAAGAAACTAAGACTCTTAGAGCAACAAGAACTTCGTGAAAAAGAAGA  1601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTTTCAAAAATTAGTGAAAAAAGGAAGAAGAAACTAAGACTCTTAGAGCAACAAGAACTTCGTGAAAAAGAAGA  1850

Query 1602  GGAGGAAGAGCCGGAAGGAAAACCAAGTGATGCAGAAAGTTCGGAGAGTTCAGATGATGAAAAAGCCTGGGTTG  1675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GGAGGAAGAGCCGGAAGGAAAACCAAGTGATGCAGAAAGTTCGGAGAGTTCAGATGATGAAAAAGCCTGGGTTG  1924

Query 1676  AAGAGGTCAGGAAGCAACGCAGACTCCTCCAGCAGGAGGAAAAAGTGAAGCGGCAGGAACGACTCAAGGAGGAC  1749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AAGAGGTCAGGAAGCAACGCAGACTCCTCCAGCAGGAGGAAAAAGTGAAGCGGCAGGAACGACTCAAGGAGGAC  1998

Query 1750  CAGCAGACAGTCCTAAAGCCCCAGTTTTATGAGATCAAAGCAGGAGAAGAATTTAGAAGCTTCAAAGATTCTGC  1823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CAGCAGACAGTCCTAAAGCCCCAGTTTTATGAGATCAAAGCAGGAGAAGAATTTAGAAGCTTCAAAGATTCTGC  2072

Query 1824  CACAAAGCAGAAACTGATGAACAAAACCCTTGAAGATCGTTTGAAAATTGAAGCAAAAAATGGGACATTGAGTG  1897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CACAAAGCAGAAACTGATGAACAAAACCCTTGAAGATCGTTTGAAAATTGAAGCAAAAAATGGGACATTGAGTG  2146

Query 1898  TATCCGACACCACCGTTGGCAGCAAACAATTGACATTCACGTTAAAGAGGTCTGAACAGCAGAAGAAGCAACAG  1971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TATCCGACACCACCGTTGGCAGCAAACAATTGACATTCACGTTAAAGAGGTCTGAACAGCAGAAGAAGCAACAG  2220

Query 1972  GAGGCTGAGAAACTGCATCGACAAGAAAGGAAAAGACTCCGTCGTTCGGCCGGACACCTGAAGTCAAGACACAA  2045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GAGGCTGAGAAACTGCATCGACAAGAAAGGAAAAGACTCCGTCGTTCGGCCGGACACCTGAAGTCAAGACACAA  2294

Query 2046  AAGAGGACGGTCGTTTCAT-------------------------------------------------------  2064
            |||||||||||||||||||                                                       
Sbjct 2295  AAGAGGACGGTCGTTTCATTGATTTGGGAAGTGGTCCTACCTGTGATTAGGGAGGGGTACGTCTCCCCCAAACT  2368

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2369  GATCATCGTTAGGGTGTTAAACACAGACGAGGAAACACACGTTTTTAAAGTTCATGTACGTTCTTGTACACAGA  2442

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2443  GGTAAAGATTTGAAAACCTGTGCCTTGTGGGTTGGACTTTGAAGCTGGCCCCGCCGACGGCCACCGCACAGCCC  2516

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2517  CAGGGGTGTGCTTGCGAGTCGTTGCTCCCTGGAAACATTGTCCTTTCCCCACGGCGTTAATCATGAAAACCAGG  2590

Query 2065  --------------------------------------------------------------------------  2064
                                                                                      
Sbjct 2591  CTGGGGTTTTTTTAATATTGTGAAATGTACACCATGAAATGAAAGGTTTATCCTGTGCCAGAAACCAAGGTTTA  2664

Query 2065  --------------------------------------------------------------------  2064
                                                                                
Sbjct 2665  TCATGCTCTAGGAACTTTTTTCTTACACTGCCTACCGCCATTCATGATTAAACCATCCAGAAATACCA  2732

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