Nucleotide Global Alignment
Description
- Query:
- TRCN0000474158
- Subject:
- NR_002890.1
- Aligned Length:
- 1748
- Identities:
- 894
- Gaps:
- 749
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATCCTATAGGAGCAGCACCTTCTTCAAATTAGAAAGAGAAGTTTCCTCATCCCCAAAAAAGGTTTTTCTGAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCTTTTTAGAATTGACATAAGTTTTTAAAACTTAAATTTATGAACCAAAAATATATTTTTCTGAACAGAATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTTTAAATAATTTGACTTTTTTCCAGTGAGGTAAAAATCTTTGATAAAACTGTGATCTTTCCACCAGTCTTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTGCTGAACTTGGTGCAACAGCATAGACTAGTGGTGGGAAGGAAGATTGTAACAGGGAGGTGTGGATACCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCTCTAGAATCTATCCTGAATTTTAAGCTACACACAGCAGTAGCAGCAGACTATTAAACTAAACTTGCTTAA 370
Query 1 -------------------------------------------------ATGGGGAAGGTGAAGGTCGGAGTCA 25
|| ||||||||||||.||.|
Sbjct 371 GAGACAGCCGCATCTTCTTGTGCAGTGCCAGCCTCGTCCTGTAGACAAAAT------GGTGAAGGTCGGTGTGA 438
Query 26 ACGGATTTGGTCGTATTGGGCGCCTGGTCACCAGGGCTGCTTTTAACTCTGGTAAAGTGGATATTGTTGCCATC 99
||||||||||.|||||||||||||||||||||||||||||..||..|..|||.||||||||.||||||||||||
Sbjct 439 ACGGATTTGGCCGTATTGGGCGCCTGGTCACCAGGGCTGCCATTTGCAGTGGCAAAGTGGAGATTGTTGCCATC 512
Query 100 AATGACCCCTTCATTGACCTCAACTACATGGTTTACATGTTCCAATATGATTCCACCCATGGCAAATTCCATGG 173
||.|||||||||||||||||||||||||||||.|||||||||||.|||||.|||||.||.|||||||||.|.||
Sbjct 513 AACGACCCCTTCATTGACCTCAACTACATGGTCTACATGTTCCAGTATGACTCCACTCACGGCAAATTCAACGG 586
Query 174 CACCGTCAAGGCTGAGAACGGGAAGCTTGTCATCAATGGAAATCCCATCACCATCTTCCAGGAGCGAGATCCCT 247
|||.||||||||.|||||.|||||||||||||||||.||.||.||||||||||||||||||||||||||.|||.
Sbjct 587 CACAGTCAAGGCCGAGAATGGGAAGCTTGTCATCAACGGGAAGCCCATCACCATCTTCCAGGAGCGAGACCCCA 660
Query 248 CCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCATGGAGAAG 321
|.||.|||||.|||||.||.||.||.||||||||.|||||||||||.|||||.|||||||||||||||||||||
Sbjct 661 CTAACATCAAATGGGGTGAGGCCGGTGCTGAGTATGTCGTGGAGTCTACTGGTGTCTTCACCACCATGGAGAAG 734
Query 322 GCTGGGGCTCATTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGCCCCCTCTGCTGACGCCCCCATGTTCGT 395
||.|||||.||.|||.||||.|||||||||||||||||||||||..||||.|||||.||.|||||||||||.||
Sbjct 735 GCCGGGGCCCACTTGAAGGGTGGAGCCAAAAGGGTCATCATCTCCACCCCTTCTGCCGATGCCCCCATGTTTGT 808
Query 396 CATGGGTGTGAACCATGAGAAGTATGACAACAGCCTCAAGATCATCAGCAATGCCTCCTGCACCACCAACTGCT 469
.||||||||||||||.|||||.|||||||||...||||||||..||||||||||.|||||||||||||||||||
Sbjct 809 GATGGGTGTGAACCACGAGAAATATGACAACTCACTCAAGATTGTCAGCAATGCATCCTGCACCACCAACTGCT 882
Query 470 TAGCACCCCTGGCCAAGGTCATCCATGACAACTTTGGTATCGTGGAAGGACTCATGACCACAGTCCATGCCATC 543
||||.||||||||||||||||||||||||||||||||.||.||||||||.||||||||||||||||||||||||
Sbjct 883 TAGCCCCCCTGGCCAAGGTCATCCATGACAACTTTGGCATTGTGGAAGGGCTCATGACCACAGTCCATGCCATC 956
Query 544 ACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACAT 617
||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||||||..|||||||||
Sbjct 957 ACTGCCACCCAGAAGACTGTGGATGGCCCCTCTGGAAAGCTGTGGCGTGATGGCCGTGGGGCTGCCCAGAACAT 1030
Query 618 CATCCCTGCCTCTACTGGCGCTGCCAAGGCTGTGGGCAAGGTCATCCCTGAGCTGAACGGGAAGCTCACTGGCA 691
|||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1031 CATCCCTGCATCCACTGGTGCTGCCAAGGCTGTGGGCAAGGTCATCCCAGAGCTGAACGGGAAGCTCACTGGCA 1104
Query 692 TGGCCTTCCGTGTCCCCACTGCCAACGTGTCAGTGGTGGACCTGACCTGCCGTCTAGAAAAACCTGCCAAATAT 765
|||||||||||||.||.||..||||.|||||.||.|||||.|||||.|||||.||.||.|||||||||||.|||
Sbjct 1105 TGGCCTTCCGTGTTCCTACCCCCAATGTGTCCGTCGTGGATCTGACGTGCCGCCTGGAGAAACCTGCCAAGTAT 1178
Query 766 GATGACATCAAGAAGGTGGTGAAGCAGGCGTCGGAGGGCCCCCTCAAGGGCATCCTGGGCTACACTGAGCACCA 839
|||||||||||||||||||||||||||||.||.||||||||.||.|||||||||.||||||||||||||.||||
Sbjct 1179 GATGACATCAAGAAGGTGGTGAAGCAGGCATCTGAGGGCCCACTGAAGGGCATCTTGGGCTACACTGAGGACCA 1252
Query 840 GGTGGTCTCCTCTGACTTCAACAGCGACACCCACTCCTCCACCTTCGACGCTGGGGCTGGCATTGCCCTCAACG 913
|||.|||||||..||||||||||||.||.|||||||.|||||||||||.||.||||||||||||||.|||||.|
Sbjct 1253 GGTTGTCTCCTGCGACTTCAACAGCAACTCCCACTCTTCCACCTTCGATGCCGGGGCTGGCATTGCTCTCAATG 1326
Query 914 ACCACTTTGTCAAGCTCATTTCCTGGTATGACAACGAATTTGGCTACAGCAACAGGGTGGTGGACCTCATGGCC 987
||.|||||||||||||||||||||||||||||||.||||..|||||||||||||||||||||||||||||||||
Sbjct 1327 ACAACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATACGGCTACAGCAACAGGGTGGTGGACCTCATGGCC 1400
Query 988 CACATGGCCTCCAAGGAG-------------------------------------------------------- 1005
.|||||||||||||||||
Sbjct 1401 TACATGGCCTCCAAGGAGTAAGAAACCCTGGACCACCCACCCCAGCAAGGACACTGAGCAAGAGAGAGGCCCTA 1474
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1475 TCCCAACTCGGCCCCCAACACTGAACATCTCCCTCACAATTTCCATCCCAGACCCCCATAATAACAGGAGGGGC 1548
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1549 CTAGGGAGCCCTCCCTACTCTCTTGAATACCATCAATAAAGTTCGCTGCACCCACAAAATAAATAAATAAATAA 1622
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1623 ATAAATAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1696
Query 1006 ---------------------------------------------- 1005
Sbjct 1697 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1742
