Nucleotide Global Alignment

Description

• Query: TRCN0000474216
• Subject: XM_006498465.1
• Aligned Length: 1234
• Identities: 786
• Gaps: 320

Alignment

Query    1  ATGTTCGTGCAGGAGGAGAAGATCTTCGCGGGCAAGGTGCTGCGGCTGCACATCTGCGCGTCCGACGGCGCCGA  74
            |||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||..|||||||||||||
Sbjct    1  ATGTTCGTGCAGGAGGAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGA  74

Query   75  GTGGCTGGAGGAGGCCACCGAGGACACCTCGGTGGAGAAGCTCAAGGAGCGCTGCCTCAAGCACTGTGCTCATG  148
            |||||||||||||||.|||||||||||.|||||||||||||||||||||.|.||||||||.||..|||||||||
Sbjct   75  GTGGCTGGAGGAGGCGACCGAGGACACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGCTCATG  148

Query  149  GGAGCTTAGAAGATCCCAAAAGTATAACCCATCATAAATTAATCCACGCTGCCTCAGAGAGGGTGCTGAGTGAT  222
            |||||.|||||||.|||||.|.|.|.|||||.||.||..||||.||.|||||.||||||||||||||||||||.
Sbjct  149  GGAGCCTAGAAGACCCCAAGAATGTGACCCACCACAAGCTAATACATGCTGCTTCAGAGAGGGTGCTGAGTGAC  222

Query  223  GCCAGGACCATCCTGGAAGAGAACATCCAGGACCAAGATGTCCTATTATTGATAAAAAAGCGTGCTCCATCACC  296
            ..||..||.|||.|||||||.|||||||||||||||||.|||.|.|||||||||||||||||||.|||.||.||
Sbjct  223  AGCAAAACGATCTTGGAAGAAAACATCCAGGACCAAGACGTCTTGTTATTGATAAAAAAGCGTGTTCCTTCTCC  296

Query  297  ACTTCCCAAGATGGCTGATGTCTCAGCAGAAGAAAAGAAAAAACAAGACCAGAAAGCTCCAGATAAAGAGGCCA  370
            |||.||.|||||||||||.||||||||||||||||||||.||||||||.||.||.||||||||.|||||.||.|
Sbjct  297  ACTCCCTAAGATGGCTGACGTCTCAGCAGAAGAAAAGAAGAAACAAGAGCAAAAGGCTCCAGACAAAGATGCTA  370

Query  371  TACTGCGGGCCACCGCCAACCTGCCCTCCTACAACATGGACCGGGCCGCGGTCCAGACCAACATGAGAGACTTC  444
            |.||.||.||.||.||.||||||||..|||.||.||..||||||.|.||.||||||||||.|||||||||||||
Sbjct  371  TTCTTCGAGCAACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTC  444

Query  445  CAGACAGAACTCCGGAAGATACTGGTGTCTCTCATCGAGGTGGCGCAGAAGCTGTTAGCGCTGAACCCAGATGC  518
            ||||||||||||||||||||.||.|||||||||||.||||||||.||||||||||||||.|||||.||.|||||
Sbjct  445  CAGACAGAACTCCGGAAGATCCTCGTGTCTCTCATTGAGGTGGCACAGAAGCTGTTAGCACTGAATCCCGATGC  518

Query  519  GGTGGAATTGTTTAAGAAGGCGAATGCAATGCTGGACGAGGACGAGGATGAGCGTGTGGACGAGGCTGCCCTGC  592
            .||.|||||||||||||||||.|||||.||||||||.||.||.|||||||||||.|||||.|||.|||||.|||
Sbjct  519  AGTTGAATTGTTTAAGAAGGCAAATGCTATGCTGGATGAAGATGAGGATGAGCGAGTGGATGAGACTGCCTTGC  592

Query  593  GGCAGCTCACGGAGATGGGCTTTCCGGAGAACAGAGCCACCAAGGCCCTTCAGCTGAACCACATGTCGGTGCCT  666
            ||||||||||.||||||||||||||.||||.|||||||.|.||||||||||.|||||||||||||||.||||||
Sbjct  593  GGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAGCCTCAAAGGCCCTTCGGCTGAACCACATGTCAGTGCCT  666

Query  667  CAGGCCATGGAGTGGCTAATTGAACACGCAGAAGACCCGACCATAGACACGCCTCTTCCTGGCCAAGCTCCCCC  740
            |||||||||||||||||||||||||||.|||||||.||..|.||.|||||.||||||||.|||||.|||.|.|.
Sbjct  667  CAGGCCATGGAGTGGCTAATTGAACACTCAGAAGATCCAGCTATTGACACACCTCTTCCAGGCCATGCTGCTCA  740

Query  741  AG-AGGCCGAGGGGGCCA------CAGCAGCTGCCTCC------------GAGGCTGCCGCGGGAGCCAGCGCC  795
            || |       |||||||      ||||..||.|||||            ||.|||||.|.||||.|.||.|..
Sbjct  741  AGCA-------GGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGAAGCTGCTGTGGGAACTAGTGTT  807

Query  796  ACCGATGAGGAGGCCAGAGATGAGCTGACGGAAATCTTCAAGAAGATCCGGAGGAAAAGGGAGTTTCGGGCTGA  869
            ...|||||||||.||.|.||||||||.||.|||||||||||||||||.||.|||||||.|||.|||||.||.||
Sbjct  808  GAAGATGAGGAGTCCCGGGATGAGCTCACAGAAATCTTCAAGAAGATACGCAGGAAAAAGGAATTTCGAGCAGA  881

Query  870  TGCTCGGGCCGTCATTTCCCTGATGGAGATGGGGTTCGACGAGAAAGAGGTGATAGATGCCCTCAGAGTGAACA  943
            ||||||                                                                    
Sbjct  882  TGCTCG--------------------------------------------------------------------  887

Query  944  ACAACCAGCAGAATGCCGCGTGCGAGTGGCTGCTGGGGGACCGGAAGCCCTCTCCGGAGGAGCTGGACAAGGGC  1017
                                                                                      
Sbjct  888  --------------------------------------------------------------------------  887

Query 1018  ATCGACCCCGACAGTCCTCTCTTTCAGGCCATCCTGGATAACCCGGTGGTGCAGCTGGGCCTGACCAACCCGAA  1091
                                                                                      
Sbjct  888  --------------------------------------------------------------------------  887

Query 1092  AACATTGCTAGCATTTGAAGACATGCTGGAGAACCCACTGAACAGCACCCAGTGGATGAATGATCCAGAAACGG  1165
                      |||||||||||||||||||||||.||.||.||||||||||||||||                  
Sbjct  888  ----------GCATTTGAAGACATGCTGGAGAATCCGCTTAACAGCACCCAGTGGA------------------  933

Query 1166  GGCCTGTCATGCTGCAGATCTCTAGAATCTTCCAGACACTAAATCGCACG  1215
                                                              
Sbjct  934  --------------------------------------------------  933