Nucleotide Global Alignment
Description
- Query:
- TRCN0000474221
- Subject:
- NR_160432.1
- Aligned Length:
- 3399
- Identities:
- 1672
- Gaps:
- 1710
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCCCTGAGGATCCCGGTCCACGCGGAGGAGTGGGGCTTTTCACCGCCGCCGCCGCCGCCCTCGGACCTCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGATACTTCACATTTCCCTAGGGACGGGAGCCCGAGGGGTCCGTTCGGCCCTCTTCCTCTCGCTGGGCCGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCGCTGTAGGACCGTAACCCTTAGTCCCAATGCCTCCGTAAGCGGAGTTGAGTGGGTGCCTGTGGTTGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGGAGGTGTCCCCGGTGGCGAGCGCGGCCAGAACTGCGGTCACTTAAGTTTTCCGTGTGCGGGTTGCAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGTGCGTGCGTCTGGTATAATTTGGCTTCCTGAGATTCTGCCTTAGCAAGAAAGGAGTGGGAAATACCCTTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAGAAAACTAAAACAGTAAGAAAGCCAAAACTTATTTTTACATGGTTGTCAGCACATTTACCGATATGGACAC 444
Query 1 -------------------------------------------------------------------ATGTTAA 7
|||||||
Sbjct 445 TTTTCCCAATAATTTTCCTCCTGGTGGAGACAGTGGATTGACAGGTTCTCAGTCGGAGTTCCAGAAAATGTTAA 518
Query 8 TTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATCAGACACTGAAGGCTGAACACACAAGGTTGCAG 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATCAGACACTGAAGGCTGAACACACAAGGTTGCAG 592
Query 82 AATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTTAATGAAAAGCAAACTCAGCAGGAAAAACTTCA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTTAATGAAAAGCAAACTCAGCAGGAAAAACTTCA 666
Query 156 GCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAACTAAAGATTTAGAAGAAATGAAACTGCAGATAT 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAACTAAAGATTTAGAAGAAATGAAACTGCAGATAT 740
Query 230 TAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTT 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTT 814
Query 304 AGGAATCTAGATGAA----------------------------------------------------------- 318
|||||||||||||||
Sbjct 815 AGGAATCTAGATGAAAGTCTGGCTCTGTTGCCCAGCCTGGAGTGCAGTGGCGTGATCTCGGCTCACTTCAACCT 888
Query 319 -------------------------------------------------------------------------- 318
Sbjct 889 CCGCCTCTCGGGTTCAAGCGATTCTCTTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGCACCACCGTA 962
Query 319 -------------------------------------------------------------------------- 318
Sbjct 963 CCTGGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATATTGGCCAGCTGGTTTTGAACTCCTGATCT 1036
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1037 CAAGTGATCTGCCCGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCCTGAGCCACCATGCCCAGCCTAATTGG 1110
Query 319 ------------------------------------------------------------GAGGTAGAAAAGTA 332
||||||||||||||
Sbjct 1111 CACATCTCTTTTGCCTTGAATACTCTCCCTCCAGATACGTCGTGGCAAACTTCATCTCTTGAGGTAGAAAAGTA 1184
Query 333 TAGAGCTGTATATAATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGT 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAGAGCTGTATATAATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGT 1258
Query 407 ATGCACGTATTTTAGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATGCACGTATTTTAGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAA 1332
Query 481 CTACGTAACCAGCTGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTACGTAACCAGCTGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGT 1406
Query 555 CTATTTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGG 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTATTTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGG 1480
Query 629 CTCAGGTGGAAAATGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAG 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CTCAGGTGGAAAATGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAG 1554
Query 703 GCTGAAAAACAATCAGCTAATTTACGGGCAGAACGCTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATAC 776
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTGAAAAACAATCAGCTAATTTACGGGCAGAACGTTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATAC 1628
Query 777 CTTTTTAATTAATAAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAAC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTTTTTAATTAATAAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAAC 1702
Query 851 ATTCAAACAAACTGGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGG 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATTCAAACAAACTGGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGG 1776
Query 925 AATAAGATTCAAAGTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAA 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AATAAGATTCAAAGTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAA 1850
Query 999 AGTGCTCTTAGTAGAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAAC 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTGCTCTTAGTAGAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAAC 1924
Query 1073 TTGTGGTATTACAAGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACAT 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTGTGGTATTACAAGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACAT 1998
Query 1147 GATGTCTGGAGGCAATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCAC 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GATGTCTGGAGGCAATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCAC 2072
Query 1221 CAGGAAGGAGCTTCAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAA 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGGAAGGAGCTTCAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAA 2146
Query 1295 AAAATGAAAATTCTGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAG 1368
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAAATGAAAATTCTGACCTAAAA--------CAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAG 2212
Query 1369 AATGACTTGCTGAATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAG 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2213 AATGACTTGCTGAATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAG 2286
Query 1443 AAGCCAAGCTGAAAAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAA 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2287 AAGCCAAGCTGAAAAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAA 2360
Query 1517 AGCATAAGCTTCATGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCT 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 AGCATAAGCTTCATGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCT 2434
Query 1591 GCAATTGCCCAGAAAAAG---------CTTGA---------------------ACAGGA-----------TCTT 1623
|||||||||||||||||| |||.| |||.|| ||||
Sbjct 2435 GCAATTGCCCAGAAAAAGAGAAAATCTCTTCATGAAAACAAATTGAAAAGACTACAAGAGAAAGTAGAAGTCTT 2508
Query 1624 ----------------GAGTTGG-----------------------------GATG-CCCTTCTG-TGACTGAT 1650
||.|||| .||| .||||.|| .|||| ||
Sbjct 2509 GGAGGCAAAGAAAGAAGAATTGGAAACAGAAAATCAGGTCTTAAATAGACAAAATGTTCCTTTTGAAGACT-AT 2581
Query 1651 AC-------------------------ATACAGAGA-----------------GAGTGTA-------TTCCCCC 1675
|| ||||||||| .|||.|| ||||...
Sbjct 2582 ACAAGGCTTCAAAAAAGACTAAAAGATATACAGAGAAGACATAATGAATTTCGAAGTCTAATTTTGGTTCCTAA 2655
Query 1676 CA--CCCCCATTGAAGAGAG-ATCT--------------CTTGAAG---------------------------- 1704
|| ||.||| |.|| |||| |||..||
Sbjct 2656 CATGCCTCCA------ACAGCATCTATCAATCCTGTTAGCTTTCAGTCATCAGCCATGGTTCCAAGCATGGAAC 2723
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 2724 TACCATTTCCTCCTCATATGCAGGAGGAACAACATCAAAGGGAACTCTCTCTACTTCGCAAAAGACTAGAAGAA 2797
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 2798 CTGGAAACAACACAAAGAAAACAACTAGAGGAACTTGGATCTTCCGGAGAATGATGTTCTTGGAGAACAGGCAG 2871
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 2872 ATCAAAAGAGGTGAAGTTGGTGACTCAGTAAAACTTGACATTTTAACCTGTGGCATTTAGATACTTTTTACTGT 2945
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 2946 TTGCCAAAACACTTGAATGTGCCTCAAGAAAAGGTACCTACTACATGCTGTATTGTATGACTGTCAGGATTTTA 3019
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 3020 AGATTATACAAGTGAAGCATTAAAAGAGAAATTCTCAGAGATATTTAGAATATTTGACAATGGTTTGAGAATGT 3093
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 3094 AAAACAAAAAGGAACTAGTTAGAGTCAAGTTTTAAAATTTTTACTTTGTTGAATTTTTTTTTTTGGCATTTTGA 3167
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 3168 GTGAAATATAACTATCATTAATTCTCTCTTCATCTTTGAGATGCTTGGCCATAACAGGGTCCATACACATCTTC 3241
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 3242 TGGTTTACTATATACAAAAACTGTAGTTGAAAAAAGATGACAATTTAAAAGTCAGCCTAAAGAATGTAAAGGTA 3315
Query 1705 --------------------------------------------------------------------- 1704
Sbjct 3316 TCTATATACAAAAGGCTACCTTTTCTAAAATCTGTGTGCACATAATTAAAGAGCTTAATTTTTTTTTAA 3384
