Construct: ORF TRCN0000474221

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006307.1_s317c1
Derived from:
ccsbBroadEn_11953
DNA Barcode:
AGAGGAAGCCAATAGCGCCGGCAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CEP83 (51134)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474221
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51134 CEP83 centrosomal protein 83 NM_001042399.1 79.6% 74.8% (many diffs)
2 human 51134 CEP83 centrosomal protein 83 NM_001346457.2 79.6% 74.8% (many diffs)
3 human 51134 CEP83 centrosomal protein 83 NM_001368037.1 79.6% 74.8% (many diffs)
4 human 51134 CEP83 centrosomal protein 83 NM_001368038.1 79.6% 74.8% (many diffs)
5 human 51134 CEP83 centrosomal protein 83 NM_016122.3 79.6% 74.8% (many diffs)
6 human 51134 CEP83 centrosomal protein 83 XM_011538424.2 79.6% 74.8% (many diffs)
7 human 51134 CEP83 centrosomal protein 83 XM_017019385.2 79.6% 74.8% (many diffs)
8 human 51134 CEP83 centrosomal protein 83 XM_017019386.2 79.6% 74.8% (many diffs)
9 human 51134 CEP83 centrosomal protein 83 XM_024449002.1 79.6% 74.8% (many diffs)
10 human 51134 CEP83 centrosomal protein 83 NM_001346458.1 72.9% 68.1% (many diffs)
11 human 51134 CEP83 centrosomal protein 83 NM_001346459.1 72.9% 68.1% (many diffs)
12 human 51134 CEP83 centrosomal protein 83 NM_001368039.1 72.9% 68.1% (many diffs)
13 human 51134 CEP83 centrosomal protein 83 NM_001368040.1 72.9% 68.1% (many diffs)
14 human 51134 CEP83 centrosomal protein 83 XM_017019388.1 69.3% 62.7% (many diffs)
15 human 51134 CEP83 centrosomal protein 83 XM_024449003.1 69.3% 62.7% (many diffs)
16 human 51134 CEP83 centrosomal protein 83 XM_024449004.1 69.3% 62.7% (many diffs)
17 human 51134 CEP83 centrosomal protein 83 XM_017019389.2 69.2% 64.4% (many diffs)
18 human 51134 CEP83 centrosomal protein 83 NM_001368041.1 68.9% 64.4% (many diffs)
19 human 51134 CEP83 centrosomal protein 83 XR_002957332.1 68.6% (many diffs)
20 human 51134 CEP83 centrosomal protein 83 XM_024449005.1 67.8% 63% (many diffs)
21 human 51134 CEP83 centrosomal protein 83 XR_001748739.2 64.6% (many diffs)
22 human 51134 CEP83 centrosomal protein 83 XR_001748737.2 62.8% (many diffs)
23 human 51134 CEP83 centrosomal protein 83 XR_002957333.1 54.5% (many diffs)
24 human 51134 CEP83 centrosomal protein 83 NM_001346460.2 52.8% 52.7% (many diffs)
25 human 51134 CEP83 centrosomal protein 83 NM_001346461.2 52.8% 52.7% (many diffs)
26 human 51134 CEP83 centrosomal protein 83 XM_024449006.1 49.9% 45.7% (many diffs)
27 human 51134 CEP83 centrosomal protein 83 XM_024449007.1 49.9% 45.7% (many diffs)
28 human 51134 CEP83 centrosomal protein 83 NR_160432.1 49.1% (many diffs)
29 human 51134 CEP83 centrosomal protein 83 NM_001346462.2 43.4% 43.3% (many diffs)
30 human 51134 CEP83 centrosomal protein 83 NR_160431.1 38.3% (many diffs)
31 human 51134 CEP83 centrosomal protein 83 XR_001748736.2 31.4% (many diffs)
32 human 51134 CEP83 centrosomal protein 83 XR_001748735.2 31.1% (many diffs)
33 human 51134 CEP83 centrosomal protein 83 NM_001368042.1 30% 29.4% (many diffs)
34 human 51134 CEP83 centrosomal protein 83 XR_001748734.2 29.7% (many diffs)
35 human 51134 CEP83 centrosomal protein 83 XR_001748733.2 23.6% (many diffs)
36 human 51134 CEP83 centrosomal protein 83 XR_001748731.2 23.1% (many diffs)
37 human 51134 CEP83 centrosomal protein 83 XR_001748732.2 15.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1773
ORF length:
1704
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gttaattgat gaaaggttac gatgtgagca tcataaagct aattatcaga
121cactgaaggc tgaacacaca aggttgcaga atgaacatgt aaagttacaa aatgaactca
181agcacctgtt taatgaaaag caaactcagc aggaaaaact tcagctcctg cttgaagaac
241taagaggaga attagtagag aaaactaaag atttagaaga aatgaaactg cagatattaa
301ctccacaaaa attggaattg ctaagagccc aaatacaaca agaattagaa actccaatga
361gagaacgttt taggaatcta gatgaagagg tagaaaagta tagagctgta tataataagc
421ttcgctatga acatacattt ctcaagtcag aatttgaaca ccagaaggaa gagtatgcac
481gtattttaga tgaaggaaaa ataaaatatg aatcagagat tgcaagactg gaggaagata
541aagaagaact acgtaaccag ctgcttaatg ttgatctcac aaaagacagc aaacgagtgg
601aacaacttgc tcgagaaaaa gtctatttgt gtcaaaaatt aaaaggttta gaggctgaag
661tagcggaatt aaaggctgaa aaggagaatt ctgaggctca ggtggaaaat gcccaaagaa
721tacaggtgcg gcagttggct gagatgcagg ctacagtcag atccctggag gctgaaaaac
781aatcagctaa tttacgggca gaacgcttgg aaaaagagct acaatcaagc agtgaacaaa
841ataccttttt aattaataaa ttgcataaag ctgaacgaga aataaataca ttgtccagta
901aagtaaaaga acttaaacat tcaaacaaac tggaaataac agacatcaaa ctggagacag
961caagagctaa gagtgagcta gaaagagaaa ggaataagat tcaaagtgaa ctggatggat
1021tacagtcaga caatgaaatt ctcaaagcag ctgttgaaca tcacaaagtg ctcttagtag
1081aaaaggatcg tgaattaata cgtaaagtac aagctgccaa agaagaaggt tatcaaaaac
1141ttgtggtatt acaagatgaa aagttagaac tcgagaacag attagcagat ttggagaaaa
1201tgaaagtgga acatgatgtc tggaggcaat ctgaaaagga tcagtatgaa gagaaattgc
1261gggcttcaca gatggcagaa gagatcacca ggaaggagct tcagagtgtt aggttaaaac
1321ttcagcaaca aattgtgact attGAAAATG CAGAGAAGGA AAAAAATGAA AATTCTGACC
1381TAAAACAGCA AATCAGTAGT TTGCAGATCC AAGTGACTTC ACTTGCACAG TCAGAGAATG
1441ACTTGCTGAA TTCAAACCAA ATGCTGAAGG AAATGGTGGA GAGATTAAAA CAAGAATGCC
1501GAAATTTTAG AAGCCAAGCT GAAAAAGCGC AACTAGAAGC TGAAAAGACA TTGGAAGAGA
1561AACAGATACA GTGGTTGGAA GAAAAGCATA AGCTTCATGA GCGTATCACA GACAGAGAAG
1621AAAAGTACAA TCAAGCTAAG GAGAAACTGC AGCGAGCTGC AATTGCCCAG AAAAAGCTTG
1681AACAGGATCT TGAGTTGGGA TGCCCTTCTG TGACTGATAC ATACAGAGAG AGTGTATTCC
1741CCCCACCCCC ATTGAAGAGA GATCTCTTGA AGTTGCCAAC TTTCTTGTAC AAAGTGGTTG
1801ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1861GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGAAG
1921AGGAAGCCAA TAGCGCCGGC ATACGCGTTA AGTCgacaat caacctctgg attacaaaat
1981ttgtgaaaga tt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.